Gold-contained clusters showed many special physical and chemical properties which depend strongly on the cluster size. But what attracts our attention is small clusters are more reactive than bulk materials [33]. In this section, the structures and stabilities of AuX (X = C, Si, Ge, Sn, Pb) are considered, and the interaction mechanisms between Au atom and X atoms are investigated.
3.1 Structures and stabilities
The structural parameters, binding energies (Eb), average binding energies (Eb−ave) of AuX systems at B3LYP and CCSD(T) methods and available experimental equilibrium structural parameters were collected in Table 1. From the table, the order of distances between Au and X computed at different level is R(B3LYP) > R(CCSD(T)); B3LYP structures accord well with the experimental values [34–36] given in parentheses, and the CCSD(T) distance is shorter than the experimental value (by about 0.18 Å). Moreover, order of the RAu−X distances is RAu−C < RAu−Si < RAu−Ge < RAu−Sn < RAu−Pb, indicating a decreased stability trend from AuC to AuPb.
Table 1
Structures and stabilities of AuX system calculated at B3LYP and CCSD(T) level.
Molecules
|
|
Eb /eV
|
Eb−ave /eV
|
ω /cm−1
|
R /Å
|
AuC
|
B3LYP
|
4.593
|
2.297
|
673.8
|
1.87
|
|
CCSD(T)
|
4.518
|
2.259
|
739.0
|
1.84
|
AuSi
|
B3LYP
|
4.039
|
2.020
|
362.3(400.0a)
|
2.26(2.26a)
|
|
CCSD(T)
|
4.058
|
2.029
|
391.5
|
2.23
|
AuGe
|
B3LYP
|
3.772
|
1.886
|
231.8(249.7b)
|
2.37(2.38b)
|
|
CCSD(T)
|
3.914
|
1.957
|
257.2
|
2.32
|
AuSn
|
B3LYP
|
3.511
|
1.756
|
181.3
|
2.56
|
|
CCSD(T)
|
3.686
|
1.843
|
201.2
|
2.51
|
AuPb
|
B3LYP
|
3.346
|
1.673
|
148.9
|
2.65
|
|
CCSD(T)
|
3.538
|
1.769
|
162.9
|
2.59
|
a Reference [31]. |
b Reference [32]. |
Besides, to understand the stability of Au-X series in detail further, Eb and Eb−ave values of AuX series were performed. From the Table 1, the diffidence between Eb at CCSD(T) and B3LYP level is less than 0.2 eV for AuX system. Besides, the Eb(AuC) is maximum in the AuX series, the order of Eb is Eb(AuC) > Eb(AuSi) > Eb(AuGe) > Eb(AuSn) > Eb(AuPb), AuC shows strongest stabilities among the series. From the above-mentioned comparison, for structures and stabilities of AuX systems at different computational levels, not only value of them has few differences, but trend of AuX has the same laws, B3LYP also can be used to describe AuX series.
3.2 NBO analysis
According to the NBO analysis, an AB system can be written in terms of two directed valence hybrids, hA and hB, on its bond enters A and B atoms, \({H}_{A-B} ={ C}_{A}{h}_{A} + {C}_{B}{h}_{B}\). The coefficients, CA and CB, vary from covalent (CA = CB) to ionic limit (CA >> CB or CB >>CA).
For the alpha orbitals, the NBO results show one Au-C bond (BD) in AuC and it can be described mainly as\({ H}_{Au-C}=0.6073{h}_{Au}+0.7944{h}_{C}\). The hAu and hC can be described as linear combination of the natural atomic orbital on its center as follows:
$${h}_{Au} = 0.8954\left(6s\right)+0.4258\left(5{d}_{z2}\right),$$
$${h}_{C} = 0.3826\left(2s\right) + 0.9201\left(2{p}_{z}\right).$$
For the beta orbital, there is also only one Au-C bond in AuC system and it can be expressed as
$${H}_{Au-C} = 0.7795 {h}_{Au} + 0.6264{h}_{C},$$
$${h}_{Au} = 0.8577\left(6s\right) + 0.5033\left(5{d}_{z2}\right),$$
$${h}_{C} = 0.2587\left(2s\right) + 0.9582\left(2{p}_{z}\right).$$
The results of alpha and beta orbital based on the NBO analysis suggest a polar dative bond for Au-C, closer to the covalent than the ionic. And the Au-C interaction is resulted from the overlap of a 5d6s (mainly 5dz) hybrid on Au atom and 2s2p (mainly 2pz) hybrid on C atom which can be illustrated by the natural atomic orbital occupancies in the Table 2.
Table 2
Natural population analysis (NPA) and atomic orbital occupancies at CCSD(T) level.
Mol.
|
NPA
(Au)
|
Occupancy
(Au)
|
NPA
(X)
|
Occupancy
(X)
|
AuC
|
α:0.184
|
5dxz0.9415dyz0.9955dz20.8786s0.4836px0.01
|
-0.684
|
2s0.9412px0.0572py0.9902pz0.682
|
|
β:-0.050
|
5dxz0.9595dyz0.9725dz20.8956s0.7026pz0.02
|
0.550
|
2s0.9402px0.0402py0.0282pz0.429
|
AuSi
|
α:-0.089
|
5dyz0.9765dz20.9606s0.6186px0.0246pz0.009
|
-0.411
|
3s0.9513px0.9763py0.0213pz0.444
|
|
β:-0.050
|
5dxz0.9855dyz0.9775dz20.966s0.6126pz0.010
|
0.550
|
3s0.9303px0.0133py0.0193pz0.473
|
AuGe
|
α:-0.057
|
5dxz0.9805dz20.9646s0.5846py0.0196pz0.009
|
-0.443
|
4s0.9584px0.0174py0.9814pz0.474
|
|
β:-0.081
|
5dxz0.9835dyz0.9895dz20.9666s0.636pz0.008
|
0.581
|
4s0.9494px0.0154py0.0104pz0.435
|
AuSn
|
α:-0.080
|
5dxz0.9875dz20.9756s0.5896py0.0176pz0.009
|
-0.420
|
5s0.9585px0.0115py0.9835pz0.457
|
|
β:-0.112
|
5dxz0.9895dyz0.995dz20.9766s0.6416pz0.008
|
0.612
|
5s0.9495px0.0105py0.0075pz0.414
|
AuPb
|
α:-0.058
|
5dyz0.9885dz20.9766s0.5686px0.0146pz0.010
|
-0.442
|
6s0.9646px0.9866py0.0106pz0.474
|
|
β:-0.159
|
5dxz0.9975dyz0.9915dz20.986s0.6856pz0.006
|
0.659
|
6s0.9676px0.0066py0.0086pz0.355
|
While for alpha orbital in AuSi system, HAu−Si is represented by
$${H}_{Au-Si} = 0.8126 {\text{h} }_{Au} + 0.5829{h}_{Si},$$
$${h}_{Au} = 0.9429\left(6s\right) + 0.3280\left(5{d}_{z2}\right),$$
$${h}_{Si} = 0.2068\left(3s\right) + 0.9742\left(3{p}_{z}\right).$$
As for the beta orbital,
$${H}_{Au-Si} = 0.8197 {h }_{Au} + 0.5728{h}_{Si},$$
$${h}_{Au} = 0.9416\left(6s\right) + 0.3316\left(5{d}_{z2}\right),$$
$${h}_{Si} = 0.2211\left(3s\right) + 0.9709\left(3{p}_{z}\right).$$
Combining the HAu−Si of alpha and beta orbital for AuSi systems, it can be seen that the Au-Si bond is closer to the ionic than the covalent for CAu >> CSi, and the same results can be found for heavier Au-X interaction (X = Ge, Sn, Pb). And it explains that the Au-X bond in AuX system is caused by the overlap of a 5d6s (mainly 5dz) hybrid on Au and sp (mainly pz) hybrid on X atom.
3.3 Electron density properties
To explore the nature of the interaction of AuX system, topological analysis of the electron density deformation, ELF, BCP properties and reduced density gradient (RDG) analysis are performed.
3.3.1 Electron Density Deformation Analysis
Figure 1 shows the electron density deformation upon the formation of AuX series. All Au and X atoms has the similar contours (or isosurfaces). Obvious blue contour lines are found in the internuclear region between Au and X, indicating that net electrons accumulate in the Au-X interaction region and showing the covalent character of AuX systems. NBO analysis indicates that the 6s and 5dz2 orbitals of the Au atom and the sp hybrid of the X atoms are crucial in Au-X interaction. Figure 1 clearly shows the charge density and charge transferred from the 6s5dz2 hybrid orbital of Au atom to the sp hybrid of X.
To get more information about charge transfer, integrated charge transfer Q(z) defined by L. Belpassi and co-workers [37] were used to measure the actual electronic charge fluctuation with respect to the isolated fragments:
$$Q\left({z}_{0}\right) = {\int }_{-\infty }^{+\infty }dx{\int }_{-\infty }^{+\infty }dy{\int }_{-\infty }^{{z}_{0}}\varDelta \rho (x,y,{z}^{\text{'}}) d{z}^{\text{'}}$$
The point z = z0 is imagined on the internuclear z axis to identify a perpendicular plane passing through that point. The corresponding value of Q(z0) is used as basis to determine the amount of charge that shifted between two planes with respect to the situation in the noninteracting fragments [37]. Negative value indicates a net charge transferred from left to right, and the difference between two Q values, Q(z1) and Q(z2), showed the net electron influx into the region delimited by two planes (z = z1 and z = z2). The regions of the Q(z0) curve with a negative slope clearly corresponded to zones of charge depletion (red contours or isosurfaces in the Fig. 1), whereas charge accumulated where Q picked up (blue contours or isosurfaces in the Fig. 1).
For Au-X system, the Q value in the Fig. 2 can be both positive and negative between the Au atom and X atom, which means there are charge shifting between Au and X. According to the Fig. 2, there is a positive slope in the left region of X atoms and the increased Q in the right region of X atoms representing electron accumulation in the region. NBO analysis shows it may be caused by charge transformation of hybrid orbital. For example, as the Q curve of AuC represented, that the Q curve of AuC has a positive slope from z = -4.06 to z = -2.16 indicates net charge accumulation, which may be mainly caused by the charge transferred from the Au atom to the 2pz orbital of C atom; and it leads to a negative slope, charge starts to lose rapidly until approximately z = -1.47, the charge loss may be the result of the electron loss of 2s, 2px, and 2py orbitals resulted by the sp hybrid. Net charge acquired an increase from z = -1.47 to z = -0.69 and from z = -0.43 to z = 0.51, which is for the electron enhancement of 6s orbital resulting from the 5d6s hybrid. One can obtain the Q plots of all AuX have the similar trend in Fig. 2. Moreover, from Fig. 2, one can acquire that there is a positive slope between Au and X atoms, suggesting there are net electron accumulation among the interaction region between Au and X atoms (blue isosurface or contour line, Fig. 1). For Au-X system, there are pronounced electron accumulation in the middle of the region between the X and Au nuclei, suggesting the covalent character of Au-X interaction.
3.3.2 AIM
According to AIM theory from Bader [22], the interaction type can be characterized by the existence of a (3, -1) type of critical point (BCP) and the corresponding bond path. And the information about the interaction strength can be proposed by electron density properties at BCP. Generally, positive Laplacian value suggests shared-shell interactions, negative Laplacian value indicates closed-shell interaction. However, it fails to determine the types of the interaction involved heavier atoms [38–42]. D. Cremer et al. propose dual parameters, local energy density E(r) and Laplacian, to distinguish between covalency and ionicity for heavy-atoms-series [43]. The ‘intermediate type’ of interaction can be represented by positive Laplacian ▽²ρ(r) and negative E(r) [44].
From Table 3, for AuC at CCSD(T) level, ▽²ρ(r) ≈ 0, while the value of ρ(r) is large enough, taking the binding energies in the Table 1 into consideration, the interaction can be classified as the covalent type. For the other AuX (X = Si - Pb) systems, Laplacian ▽²ρ(r) is positive and E(r) is negative, we can classify the interaction of them as intermediate type. By comparing the computational results of AIM at different theoretical level, the B3LYP AIM analysis also can obtain the same result of the interaction type between Au and X atoms.
Table 3
BCP properties at B3LYP and CCSD(T) level.
BCP
|
|
E
|
▽²ρ
|
ρ
|
λ2
|
ELF
|
Au-C
|
B3LYP
|
-0.137
|
0.050
|
0.193
|
-0.277
|
0.608
|
CCSD(T)
|
-0.166
|
-0.005
|
0.212
|
-0.312
|
0.642
|
Au-Si
|
B3LYP
|
-0.067
|
-0.019
|
0.094
|
-0.088
|
0.452
|
CCSD(T)
|
-0.070
|
0.041
|
0.099
|
-0.102
|
0.364
|
Au-Ge
|
B3LYP
|
-0.040
|
0.071
|
0.089
|
-0.077
|
0.442
|
CCSD(T)
|
-0.050
|
0.067
|
0.098
|
-0.088
|
0.448
|
Au-Sn
|
B3LYP
|
-0.025
|
0.102
|
0.073
|
-0.057
|
0.343
|
CCSD(T)
|
-0.031
|
0.113
|
0.080
|
-0.064
|
0.341
|
Au-Pb
|
B3LYP
|
-0.019
|
0.117
|
0.068
|
-0.054
|
0.310
|
CCSD(T)
|
-0.025
|
0.130
|
0.076
|
-0.062
|
0.316
|
To quantitatively analyze electrons distribution in the basins, the localization index (LI) and delocalization index (DI) were performed by integrating electron density,\({{\rm N}}_{{\varOmega }_{i}}=\underset{{\varOmega }_{i}}{\overset{}{\int }}\rho \left(r\right)dv.\)LI measures how many electrons are localized in a basin in average, the number of electrons shared or exchanged between two atoms or basins are measured by DI.
Comparing DI(Au-X) in AuX systems, DI(Au-C) in Table 4 is the largest in all AuX systems, indicating the phenomenon of electrons accumulation in AuC system is more obvious than other AuX systems, the result is consistent with AIM analysis. For AuX(X = Si, Ge, Sn, Pb) systems, although DI(Au-Si) is the smallest, ratio between DI(Au-X) and P(Au-X) decreases from AuC to AuPb, suggesting the strength of electrons accumulation is on the wane considering the total electron population of AuX systems.
Table 4
The DI and LI of AuX systems.
Molecules
|
DI (Au-X)
|
LI(Au)
|
LI(X)
|
P(Total)
|
DI / P %
|
AuC
|
1.693
|
18.137
|
5.167
|
24.997(25)
|
6.773
|
AuSi
|
1.285
|
19.067
|
12.600
|
32.952(33)
|
3.900
|
AuGe
|
1.395
|
18.727
|
20.877
|
40.999(41)
|
3.403
|
AuSn
|
1.329
|
18.773
|
20.898
|
41.000(41)
|
3.241
|
AuPb
|
1.320
|
18.727
|
20.953
|
41.000(41)
|
3.220
|
3.3.3 Electron Localization Function.
ELF, a three-dimensional real space function within the range of (0,1), is used to describe the efficient of the Pauli repulsion at a given point of the molecular space [21]. A large ELF value usually means that it has high possibility to find an electron or a pair of localized electrons in the corresponding region. To have a better understanding of the Au-X interaction mechanism, colorfilled maps of ELF for the AuX system were depicted in the Fig. 3.
As shown in Fig. 3, there is a valence basin between Au and C atom, the ELF value is large enough and about 0.80, which suggests high possibility to find electron accumulation in the corresponding region and covalent character of interaction between Au and C. For AuSi and AuGe, although there also are valence basin, the ELF value is about 0.65 and 0.55 and it’s not large enough only indicating the interaction of them contains covalent components, the interaction type of AuSi and AuGe can be thought as an intermediate type. The ELF value of Aasen and AuPb are less than 0.5, representing that the interaction in the corresponding region is closer to ionicity than covalency. ELF value between Au and X atoms decreases stepwise from AuC to AuPb, suggesting the covalency is on the wane from AuC to AuPb.
3.3.4 RDG.
To investigate the weak interactions in real space, Yang and co-workers proposed reduced density gradient (RDG) function based on the electron density and its derivatives [45], \(RDG = 1/\left(2\right(3{\pi }^{2}{)}^{1/3}\left)\right|\nabla \rho |/{\rho }^{4/3}\). Plots of the RDG versus sign(λ2)ρ can analyze and visualize a wide range of interaction types. Large, negative value of sign(λ2)ρ is indicative of stronger attractive interactions (spikes in the left part in Fig. 4), while if it is large and positive, the interaction is repulsive (spikes in the right part in Fig. 4) [45].
It is clearly shown in Fig. 4 that the line of RDG = 0.2 crosses only the attractive interaction spikes, while the line of RDG = 0.4 crosses both the attractive and the repulsive spikes. For the surface of AuPb as an example, in the first case (RDG = 0.2 isosurface), the low-density, low gradient region corresponds to the interaction region between Au and Pb atoms. The blue region clearly shows the stronger attractive interaction between Au and Pb. The RDG = 0.4 isosurface clearly shows the steric repulsion by the red loops. The electron density value at the peak itself provides the information about the interaction strength. The electron density value at the peaks of Au-X interactions decreases from about 0.212 in AuC to about 0.076 in AuPb, indicating the covalent character in the Au-X interaction and the attractive interaction strength decreases from Au-C to Au-Pb.
3.4 Energy decomposition analysis (EDA)
In a new perspective of energy decomposition proposed by S. B. Liu [23], it is found interaction energy (Eb in Table 5) can also be decomposed as Es, Ee, and Eq, where Es, Ee, and Eq stand respectively for the independent energy contribution from the steric, electrostatic, and quantum effect. Quantum effect [46, 47] comes from the Pauli exclusion principle (Fermi hole) [48] and dynamic electron correlation effect (Coulomb hole) [49]. Electrostatic effect mainly comes from the electron-electron, nuclear-nuclear Coulomb repulsions and nuclear-electron Coulomb attraction. Steric effect originates commonly from the fact that there will exist hindrance when each atom in a molecule is brought together.
Table 5
The total interaction energy and its partition at B3LYP level.
Molecules
|
Es /eV
|
Ee /eV
|
Eq /eV
|
Eb /eV
|
AuC
|
26.538
|
-2.842
|
-19.103
|
4.593
|
AuSi
|
16.805
|
-1.341
|
-11.424
|
4.039
|
AuGe
|
15.687
|
-0.692
|
-11.222
|
3.772
|
AuSn
|
14.400
|
-1.008
|
-9.882
|
3.511
|
AuPb
|
14.149
|
-1.139
|
-9.664
|
3.346
|
C2
|
43.364
|
13.474
|
-47.113
|
9.726
|
From Table 5, one notice that the interaction energy between Au and X atoms comes from the negative contribution of quantum and electrostatic interaction, with the latter much smaller in magnitude, indicating that the negative contribution to Eb mainly comes from the quantum effects, and positive contribution to Eb is mainly caused by steric effects. Value of Eb(AuX) and Es(AuX) decrease from AuC to AuPb, interaction strength and steric effects between Au and X atoms decrease from X = C to X = Pb. And steric effects are attractive to the interaction between Au and X atoms. Equally, quantum repulsion and electrostatic repulsion between Au and X atoms also decrease from AuC to AuPb. Comparing AuC with other AuX series, Eb(AuC) > Eb(AuX), the interaction decrease from AuC to AuPb is mainly caused by the positive contribution of steric effect and the negative contribution of quantum and electrostatic effects. Comparing C2 with AuC, the Eb(AuC) < Eb(C2), meaning the interaction strength decreases, and the interaction decrease mainly comes from the positive contribution of steric and electrostatic interaction and the negative contribution of quantum interaction. It may indicate that the interaction decrease is caused by steric effect decrease and compensated by quantum effect increase for AuX series.
To get more information about steric effects in the formation of AuX, steric charge provided by S. B. Liu and co-workers is used as a local descriptor to quantitatively describe steric effects [50]. The steric charge distribution of single atom and AuX series at B3LYP level can be visualized from Fig. 5 and Fig. 6. Steric charge distribution of single atom is symmetrical from Fig. 5. The most of AuX steric charge distributions localize near the nuclei. And one notice that isosurface shape of AuSi and AuPb had smaller change than AuC, indicating the interaction type between Au and X atoms may cause effects to the steric charge distribution. And it suggests steric effect provide positive contribution to the interaction decrease. The steric charge deformation (△es) at BCP was performed at B3LYP level. According to Fig. 7, Es(AuX) increases from X = C to X = Pb, but △es(AuX) decreases stepwise. Es(AuX) is positively correlated with △es(AuX) and the Es is higher and the steric charge shift is more obvious at the BCP, also indicating that the Es does positive contribution to the Au-X interaction.