Participants’ Clinical Characteristics
A total of 187 subjects, including 75 BPH patients, 62 PCa patients, and 50 PCaB patients, were included, while their clinical characteristics are presented in Table 1. In the cohort, the mean age of patients was significantly greater in PCaB, followed by PCa and BPH subjects. Although the body mass index (BMI) of PCaB had decreased compared to PCa, no significant alteration was observed in PCa and PCaB patients compared to BPH subjects. Furthermore, PCaB patients had distinct higher PSA levels than PCa and BPH groups; however, no difference was observed in PSA levels between BPH and PCa cases.
Metabolic Segregations among BPH, PCa, and PCaB patients
This study comprehensively analyzed the metabolic profiles of serum samples obtained from 75 BPH, 62 PCa, and 50 PCaB patients by a 1H-NMR based metabolomics approach. Figure 1A illustrates a typical 1H-NMR spectrum of BPH serum sample containing 25 metabolites that were mainly involved in energy metabolism (citrate, creatine, creatinine, glucose, lactate, and pyruvate), amino acid metabolism (alanine, glutamine, glycine, histidine, isoleucine, leucine, lysine, phenylalanine, threonine, tyrosine, and valine), ketone body metabolism (3-hydroxybutyrate (3-HB), acetone and acetoacetate), lipid metabolism (LDL/VLDL and glycerol) and fatty acid metabolism (acetate and formate).
The PLS-DA, based on the serum metabolome characteristics, was carried out for determining the metabolic pattern changes among BPH, PCa, and PCaB groups. As illustrated in Figure 1B, the PLS-DA score plot revealed a clear metabolic pattern demarcation between BPH, PCa, and PCaB subjects. Subsequently, a supervised OPLS-DA model was utilized for characterizing the discrimination between the two groups as well as the VIP score, which confirmed the differential metabolites. As can be seen from Figure 1C-E, the discriminant capabilities of the PLS-DA models were observed in the following groups: between BPH and PCa (R2 = 0.574, Q2 = 0.47) (Figure 1C), between BPH and PCaB (R2 = 0.585, Q2 = 0.522) (Figure 1D) as well as between PCa and PCaB (R2 = 0.594, Q2 = 0.475) (Figure 1E). The BPH and PCa segregation as displayed by the VIP score of OPLS-DA was mainly attributed to metabolites like 3-HB, alanine, acetone, glutamine, tyrosine, histidine, and formate (Figure 1C). In contrast, significant metabolites like leucine, isoleucine, valine, acetoacetate, pyruvate, creatine, phenylalanine, histidine, and formate played a remarkable role in metabolic differentiation between BPH and PCaB patients (Figure 1D). Additionally, LDL/VLDL, leucine, isoleucine, valine, 3-HB, alanine, acetone, acetoacetate, pyruvate, citrate, and creatine were also associated with PCa and PCaB dissociation in the serum metabolome (Figure 1E).
Quantification of Differential Metabolites among BPH, PCa, and PCaB
Statistical analysis of detected metabolites was obtained for exploring the characteristic metabolic changes among BPH, PCa, and PCaB groups in Table 2. When compared with BPH, PCa had significantly lower levels of histidine, glutamine, acetone, and 3-HB as well as higher serum levels of tyrosine and alanine, whereas PCaB had significantly increased levels of phenylalanine, formate, glucose, and pyruvate along with a remarkable decrease in histidine, creatine, glutamine, acetoacetate, acetate, valine, isoleucine and leucine when compared to BPH cases. Furthermore, in comparison with PCa, PCaB subjects had higher levels of phenylalanine, citrate, pyruvate, and alanine in serum metabolome coupled with lower creatine, lysine, acetone, 3-HB, valine, isoleucine, leucine, and LDL/VLDL levels.
Table 2
Metabolic changes in serum samples from BPH, PCa, and PCaB.
Metabolites
|
BPH
|
PCa
|
PCaB
|
P value
|
PCa
vs
BPH
|
PCaB
vs
BPH
|
PCaB
vs
PCa
|
3-HB
|
9.31 ± 5.69
|
6.18 ± 3.51
|
8.86 ± 7.11
|
0.001
|
0.6520
|
0.010
|
Acetate
|
2.11 ± 0.61
|
1.99 ± 0.63
|
1.92 ± 0.99
|
0.255
|
0.0107
|
0.158
|
Acetoacetate
|
2.36 ± 1.19
|
2.14 ± 0.89
|
1.94 ± 0.92
|
0.204
|
0.0221
|
0.304
|
Acetone
|
5.77 ± 4.36
|
3.21 ± 2.24
|
5.21 ± 5.21
|
0.000
|
0.4529
|
0.009
|
Alanine
|
16.80 ± 2.71
|
18.57 ± 2.52
|
17.37 ± 3.45
|
0.001
|
0.2625
|
0.027
|
Creatine
|
2.62 ± 0.62
|
2.63 ± 0.55
|
2.36 ± 0.70
|
0.921
|
0.0189
|
0.019
|
Creatinine
|
1.03 ± 0.32
|
1.02 ± 0.29
|
1.00 ± 0.35
|
0.892
|
0.2292
|
0.304
|
Citrate
|
2.44 ± 0.56
|
2.34 ± 0.43
|
2.56 ± 0.61
|
0.062
|
0.1402
|
0.010
|
Formate
|
0.09 ± 0.04
|
0.11 ± 0.04
|
0.12 ± 0.04
|
0.062
|
0.0009
|
0.140
|
Glutamine
|
18.97 ± 3.20
|
17.84 ± 2.68
|
17.70 ± 4.18
|
0.032
|
0.0255
|
0.841
|
Glycine
|
8.29 ± 1.87
|
8.01 ± 1.54
|
8.41 ± 2.48
|
0.417
|
0.7400
|
0.285
|
Gycerol
|
9.60 ± 1.77
|
9.50 ± 2.58
|
10.18 ± 2.75
|
0.815
|
0.1689
|
0.125
|
Histidine
|
1.20 ± 0.21
|
1.13 ± 0.18
|
1.09 ± 0.21
|
0.032
|
0.0025
|
0.338
|
Isoleucine
|
2.73 ± 0.47
|
2.72 ± 0.39
|
2.55 ± 0.43
|
0.922
|
0.0189
|
0.031
|
Lactate
|
100.63 ± 36.14
|
92.09 ± 29.81
|
90.63 ± 33.26
|
0.138
|
0.0935
|
0.815
|
LDL/VLDL
|
56.61 ± 21.04
|
61.83 ± 20.69
|
52.34 ± 23.60
|
0.258
|
0.1700
|
0.018
|
Leucine
|
13.53 ± 2.02
|
13.31 ± 1.64
|
12.63 ± 2.03
|
0.478
|
0.0041
|
0.034
|
Lysine
|
2.46 ± 0.33
|
2.54 ± 0.46
|
2.37 ± 0.45
|
0.253
|
0.243
|
0.030
|
Phenylalanine
|
0.68 ± 0.26
|
0.72 ± 0.31
|
0.84 ± 0.35
|
0.468
|
0.005
|
0.043
|
Pyruvate
|
1.65 ± 0.44
|
1.65 ± 0.38
|
1.93 ± 0.56
|
0.973
|
0.001
|
0.001
|
Threonine
|
1.76 ± 0.31
|
1.73 ± 0.40
|
1.70 ± 0.33
|
0.606
|
0.292
|
0.595
|
Tyrosine
|
0.94 ± 0.19
|
1.02 ± 0.15
|
1.01 ± 0.33
|
0.044
|
0.086
|
0.819
|
Valine
|
9.37 ± 1.47
|
9.35 ± 1.32
|
8.65 ± 1.57
|
0.916
|
0.005
|
0.010
|
α-Glucose
|
14.19 ± 3.07
|
14.89 ± 2.89
|
15.31 ± 3.46
|
0.199
|
0.046
|
0.464
|
β-Glucose
|
12.81 ± 3.10
|
12.98 ± 3.29
|
12.97 ± 3.45
|
0.756
|
0.780
|
0.984
|
Data were presented as Mead ±SD; BPH, patient with benign prostatic hyperplasia; PCa, prostate cancer; PCaB, prostate cancer with bone metastasis; 3-HB, 3-hydroxybutyrate. |
Diagnostic Performance of Potential Metabolic Biomarkers
ROC curves analysis, including the AUC value was conducted for evaluating the efficient utilization of the identified significant metabolites for BPH, PCa and PCaB patients screening, based on the metabolites with VIP value > 1 and p-value < 0.05. Figure 2 illustrates the diagnostic performance of potential metabolic biomarker panels (AUC value > 0.6, p-value < 0.05) as they account for discrimination between BPH and PCa groups due to the exhibition of good response by the five metabolite levels that included 3-HB (AUC = 0.678, sensitivity = 43.55%, specificity = 84%), alanine (AUC = 0.708, sensitivity = 58.06%, specificity = 81.33%), acetone (AUC = 0.687, sensitivity = 74.19%, specificity = 60%), tyrosine (AUC = 0.648, sensitivity = 87.10%, specificity = 38.67%) and histidine (AUC = 0.602, sensitivity = 70.97%, specificity = 46.67%). Moreover, the ROC analysis revealed that these five metabolites in combination had a 0.815 AUC value, along with 75.81% and 72% sensitivity and specificity, respectively. While an integration of these five metabolites with age and BMI might achieved 0.828 AUC value coupled with a sensitivity and specificity of 56.45% and 94.67%, respectively.
The ROC analysis results based on the BPH and PCaB differentiating values (AUC value > 0.6 and p-value < 0.05) are shown in Figure 3 which identified eight total of 8 metabolites, that included leucine (AUC = 0.607, sensitivity = 60%, specificity = 62.57%), isoleucine (AUC = 0.614, sensitivity = 54.55%, specificity = 68%), valine (AUC = 0.631, sensitivity = 61.82%, specificity = 61.33%), acetoacetate (AUC = 0.625, sensitivity = 38.18%, specificity = 85.33%), pyruvate (AUC = 0.644, sensitivity = 60%, specificity = 68%), phenylalanine (AUC = 0.675, sensitivity = 62.5%, specificity = 70.83%), histidine (AUC = 0.683, sensitivity = 72.73%, specificity = 58.67%) and formate (AUC = 0.651, sensitivity = 56.36%, specificity = 72%). Moreover, the combination of all these metabolites resulted in a 0.794 AUC value, and the sensitivity and specificity were 65.45% and 85.33%, respectively. Notably, the amalgamation of these eight metabolites with age and BMI was extremely capable of differentiating BPH from PCaB cases, with an AUC value of 0.917, 89.36% sensitivity and 90.67% specificity.
Similarly, the ROC analysis identified top eight metabolites for extricating PCaB diagnosis from PCa as shown in Figure 4, while their combination exhibited a better classification (AUC = 0.828, sensitivity = 78.18%, specificity = 74.19%) than a singular metabolite: LDL/VLDL (AUC = 0.642, sensitivity = 54.55%, specificity = 74.19%), isoleucine (AUC = 0.622, sensitivity = 43.64%, specificity = 85.48%), valine (AUC = 0.626, sensitivity = 49.09%, specificity = 75.81%), 3-HB (AUC = 0.604, sensitivity = 80%, specificity = 41.94%), alanine (AUC = 0.614, sensitivity = 56.36%, specificity = 70.97%), pyruvate (AUC = 0.659, sensitivity = 89.09%, specificity = 38.71%), citrate (AUC = 0.613, sensitivity = 32.73%, specificity = 98.39%) and creatine (AUC = 0.622, sensitivity = 34.55%, specificity = 88.71%). Additionally, the merging of eight metabolites with age and BMI displayed the best predictability with an AUC value, sensitivity and specificity of 0.872, 87.23% and 74.19%, respectively.
Metabolic Pathway Analysis of Differential Metabolites among BPH, PCa, and PCaB
Metabolic pathway analysis was carried out based on the differential metabolite values (p-value < 0.01 and AUC value > 0.6) for exploring pathway-based metabolic features, as shown in Figure 5. Our results suggested that a series of metabolic pathways like energy, amino acid, and ketone body metabolism were implicated in metabolic discrimination among BPH, PCa, and PCaB subjects.