Ulva grossa sp. nov. (Ulvales, Chlorophyta) from Korea based on molecular and morphological analyses

DOI: https://doi.org/10.21203/rs.3.rs-1305685/v1

Abstract

A marine green algal species was collected from the eastern coast of Korea. This species shares the generic features of Ulva, and is characterized by irregularly shaped thalli, relatively small and thick thallus, entire undulate margins without serrations and one or two pyrenoids per cell. In a phylogenetic tree based on sequences of the nuclear-encoded internal transcribed spacer region (ITS) of ribosomal (r)DNA, it nests as a sister clade to some species including U. ohnoi with a relatively large thallus. This Korean alga differs from those species forming the same or subclades, such as U. ohnoi, U. fasciata, U. reticulata, and U. gigantean, in having a relatively small (3–8 cm) and thick (60–100 µm) thallus. Of these species, U. ohnoi originally described from Japan is similar to the Korean alga in having a more or less thick thallus of 30–90 µm, but is distinguished from the Korean species in often having microscopic serrations in the thallus margin. The genetic distance between this Korean entity and those species was calculated as 1.8–4.8%, which is considered to be an inter-specific divergence level with the genus Ulva. Ulva grossa sp. nov. (Ulvales, Chlorophyta) is described from Korea based on the morphological and molecular analyses herein.

Introduction

Ulva Linnaeus, commonly referred to as “sea lettuce”, is the most species-rich genus in the family Ulvaceae (Kazi et al. 2016), and 129 species are currently accepted in this genus (Guiry and Guiry 2019). Of these, several species are associated with notorious blooms called “green tides” (Fletcher 1996; Blomster et al. 2002; Zhao et al. 2010; Kazi et al. 2016).

Ulva exhibits various morphology in thallus, such as foliose, lanceolate, linear, ovate, cuneate or tubulose. These features are useful in part for the genus taxonomy. Other characteristics including cell size, shape and arrangement, thallus thickness, number of pyrenoids per cell and morphology of holdfast and basal region have also been adopted for the identification of Ulva species (Bliding 1968; Koeman and van den Hoek 1981). However, intraspecific variations were observed for these characteristics in different environments and growth phases (Blomster et al. 1998; Kazi et al. 2016). The morphological plasticity is a cause of uncertainty about the taxonomic status of most taxa in this genus, resulting in the recognition of large numbers of varieties, forms and ecotypes. This plasticity was also found at a higher taxonomic level, namely in a generic characteristic previously distinguishing Ulva and Enteromorpha Link (i.e., distromatic thalli in Ulva and tubular-monostromatic thalli in Enteromorpha) (Hayden et al. 2003; Shimada et al. 2003; Kazi et al. 2016).

Recently, molecular studies of Ulva have contributed significantly to its taxonomy, such as the merging of Ulva and Enteromorpha (Hayden et al. 2003), synonymization of U. lactuca Linnaeus and U. fasciata Delile (O’Kelly et al. 2010) and identification of green tide-forming taxa (Liu et al. 2010; Zhao et al. 2010; Guidone el al. 2013; Guoying et al. 2014; Kazi et al. 2016). The molecular data also helped in understanding the biogeographic history, cryptic diversity and introduction of species of Ulva in different regions (Heesch et al. 2009; Hofmann et al. 2010; Kraft et al. 2010; Wolf et al. 2012; Kirkendale et al. 2013; Kazi et al. 2016). These suggest that an approach to the taxonomy of Ulva based on both morphological and molecular data is required (Loughnane et al. 2008; Hofmann et al. 2010; Matsumoto and Shimada 2015).

A total of 16 species are currently recorded in the marine algal flora of Korea (Lee and Kang 1986, 2002, Lee 2008, Bae 2010, Kim et al. 2013, An et al. 2017). During a survey of algal flora, a marine Ulva species (Chlorophyta) was collected from the eastern coast of Korea. This Korean entity was newly described based on morphological and molecular analyses.

Materials And Methods

Samples for the present study were collected from Uljin and Yeongdeok, which are located on the eastern coast of Korea. All specimens were preserved in 5–10% formalin seawater, and pressed on herbarium sheets. Sections of the thallus were mounted in 20% corn syrup for permanent preparation. Measurements are given as width × length. Species identification was based on thallus morphology following the criteria of Bliding (1963, 1968) and Koeman and van den Hoek (1981). A portion of the material was dried and preserved in silica gel for molecular analysis. Total genomic DNA was extracted from a sample preserved in silica-gel using the DNeasy Plant Mini Kit (Qiagen, Hilden, Germany) according to the manufacturer's protocol. Before extraction, dried material was crushed with liquid nitrogen using a mortar and pestle. Concentrations of extracted DNA were assessed using gel electrophoresis on a 1% agarose gel. Extracted DNA was used for amplification of the internal transcribed spacer (ITS) regions using published primers (Blomster et al. 1998). ITS regions were PCR amplified as a single fragment with the primers ITSP1 (5′ GGAAGGAGAAGTCGTAACAAGG 3′) and G4 (5′ CTTTTCCTCCGCTTATTGATATG 3′) (Harper and Saunders 2001) or as two overlapping fragments with the primers ITSP1 and ITSR1 (5′ TTCAAAGAT TCGATGATTCAC 3′) and P5 (5′ GCATCGATGAAGAACGCAG 3′) and G4 (Harper and Saunders 2001). PCR amplifications were performed in a TaKaRa PCR Thermal Cycler Dice with an initial denaturation step at 94 ℃ for 5 min followed by 35 cycles at 94 ℃ for 1 min, 56 ℃ for 1 min, and 72 ℃ for 2 min and a final extension at 72 ℃ for 7 min. The reaction volume was 20 µL, consisting of 20 ng of genomic DNA, 2 µL of 10x PCR buffer, 2 µL of 200 µM dNTP, 1 µL of each forward and reverse primer, and 0.5 units of Taq polymerase (Takara Korea, Korea). Amplifications were examined using gel electrophoresis in a 1% agarose gel and amplified ITS region products were purified using a QIAquick Gel Extraction Kit (Qiagen, Hilden, Germany). The PCR products were moved to Macrogen Sequencing Service for sequencing (Macrogen, Seoul, Korea). The PCR primers were also used for sequencing.

Sequences for the ITS region were aligned using BioEdit (Hall 1999). Phylogenetic analyses were performed using the neighbor-joining (NJ) and maximum-likelihood (ML) methods. Bootstrap values were calculated with 1,000 replications. The ITS sequences of other species were obtained from GenBank. Umbraulva japonica (Holmes) Bae et I.K.Lee was used as an outgroup.

Results

Ulva grossa sp. nov.

Description: Thalli 5–10 cm high (Fig. 1a), erect, membranous, distromatic (Fig 1c), usually irregularly shaped and unbranched or little branched conical to ligulate shape (Fig. 1b), relatively small and thick thallus, light to dark green in color, soft in texture, attached by a small holdfast on rocks near the lower intertidal; frond irregular shaped, with a spirally twisted basal portion, with usually entire, undulate margin without serrations (Fig. 1d), 50–60 μm thick in the upper portion, 100–130 μm thick in the basal portion; the cells usually arranged in pairs, rectangular to polygonal near the middle to upper portion, oval to rectangular with round corners near the basal portion in the surface view (Fig. 1e), transformed into rhizoidal cells near the base, 10–20 μm × 10–18 μm, with a length-to-width ratio of 1.5–2.0 in the transverse section; chloroplasts cap-like, parietal, with one or two pyrenoids (Fig. 1f). 

Habitat: Epilithic near the lower intertidal.

Specimens examined: MGARB00001548–MGARB00001550 (Geoil-ri, Uljin: 21.vi.2018), MGARB00001551 (Changpo-ri, Yeongdeok: 22.vi. 2018), MGARB00001552–MGARB00001553 (Daejin-ri, Yeongdeok: 21.vi. 2018).

Holotype: MGARB00001548 (Fig. 1a).

Type locality: Geoil-ri (N 36° 41′ 49.8″ E 129° 28′22.5″), Hupo-myeon, Uljin-gun, Gyeongsangbuk-do, Korea.  

Etymology: The specific epithet is derived from the relatively small, thick and coarse thallus.

Korean name: Do-tom-gal-pa-rae

 

Phylogenetic analyses

Thirty-three species were contained in the dataset alignment based on ITS sequences. Thirty-five sequences were obtained from 32 samples of Ulva in GenBank and three samples of U. grossa collected from Korea in the present study. The phylogenetic tree was inferred by using the NJ and ML method based on the Tamura 3-parameter model (Tamura 1992). The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. All positions containing gaps and missing data were eliminated. There was a total of 173 positions in the final dataset. 

U. grossa formed a sister clade to some species including U. ohnoi (Fig. 2). The genetic distance between sequences of U. grossa collected from the three localities in Korea was ranged from 0.0% to 0.1%. However, the values between U. grossa and other Ulva species were calculated as 1.8–6.7% in the present study. In particular, the genetic divergence within the sister clade to U. grossa was 1.8%–4.8%. 

Discussion

Ulva was established based on U. lactuca originally described from the Atlantic Ocean (Linnaeus 1753). In basic thallus morphology, Ulva is a flattened distromatic or tubular monostromatic (Hayden et al. 2003), and its blades are broadly expanded foliose, irregularly lobed, cuneate, linear, ovate, lanceolate, oblanceolate, and deeply divided into linear lacinae or tubulose (Guiry and Guiry 2019). Even though intra- or inter-specific variation and overlap are found, cell size, shape and arrangement, thallus thickness, chloroplast disposition and number of pyrenoids per cell, and morphology of holdfast and basal region are useful as taxonomic characteristics for this genus (Bliding 1968; Steffensen 1976; Mshigeni and Kajumulo 1979; Koeman and van den Hoek 1981; Tanner 1986; Phillips 1988; Malta et al. 1999).

The type species U. lactuca is commonly distributed along the coasts of Korea (Lee and Kang 2002). However, it is occasionally confused with U. ohnoi, which was originally described from Japan, in gross morphology with ovate or fan-shaped thallus in Korea (Hiraoka et al. 2003; the present study). However, U. lactuca is separable from the latter species in having relatively small and thick thallus (Womersley 1984; Bae 2010; Dawes and Mathieson 2008), even though the thallus size of U. ohnoi varies greatly with habitat (Hiraoka el al. 2003; O’Kelly et al. 2010; the present study). U. lactuca shows broadly expanded, lanceolate, ribbon-like and more or less deeply divided thallus. In addition, U. lactuca appears to lack the features of mostly orbicular-shaped thallus of two layers separated easily, which are found in U. ohnoi (Hiraoka et al. 2003). The specimens collected from the eastern coast of Korea share the generic features found in Ulva lactuca, and are characterized by the following combination of characteristics: irregularly shaped thalli, relatively small and thick thallus, entire undulate margins without serrations and one or two pyrenoids per cell. 

In a phylogenetic tree based on sequences of the nuclear-encoded internal transcribed spacer region (ITS) of ribosomal (r)DNA, it forms a sister clade to some species groups including U. ohnoi with a relatively large thallus. This Korean alga differs from those species forming the same or subclades, such as U. ohnoi, U. fasciata, U. reticulata, and U. gigantea, in having a relatively small (3–8 cm) and thick (60–100 μm) thallus (Table 1). Of these species, U. ohnoi, which was originally described from Japan (Hiraoka et al. 2003), is similar to U. grossa in having a more or less thick thallus of 30–90 μm (Table 1). However, it is distinguished from the Korean species in often having microscopic serrations in the thallus margin. U. grossa has an entire thallus margin without serrations. More importantly, both species are distinguishable from each other by thallus size and habitat. U. grossa is small (3–8 cm) in thallus size and always saxicolous, while those in U. ohnoi are respectively large (20–30 cm) and saxicolous or floating. 

In addition to the characteristics of thallus size and thickness, the dividing and marginal features of thallus appear to be useful in part for distinguishing U. grossa from the other species nesting in the sister clade. U. fasciata from Egypt (Silva et al. 1996) and U. gigantean from France occasionally show a ruffled and macroscopic serration margin rather than entire margin in thallus, respectively (Table 1). Thallus dividing in U. grossa is irregular, while that in U. fasciata, U. reticulata and U. gigantean is irregularly or palmately to linear, deeply and irregularly lobed, or deeply laciniate (Table 1).

Molecular data also confirm the distinction of U. grossa from those species. The genetic distance between U. grossa and those species of the sister clade was calculated as 1.8–4.8%. This estimated sequence divergence for ITS rDNA sequence is well within the inter-specific range based on the previous reports (Hayden and Waaland 2002; Shimada et al. 2003; Ichihara el al. 2009). This warrants its recognition as a new species in the genus Ulva. Accordingly, Ulva grossa sp. nov. (Ulvales, Chlorophyta) is described from Korea based on the morphological and molecular analyses herein. 

Declarations

Acknowledgments

 

Funding This work was supported by a Research Grant of Pukyong National University (2021).

 

Conflicts of interest The authors declare no conflict of interest.

Ethics approval Not applicable

Consent for publication All authors consent for publication.

References

Abbott IA, Huisman JM (2004) Marine green and brown algae of the Hawaiian Islands. Bishop Museum Press, Honolulu, U.S.A. 259 pp

An JW, Nam KW (2017) First record of Ulva torta (Ulvales, Chlorophyta) in Korea. Korean J Environ Biol 35:329–334

Bae HB (2010) Ulotrichales, Ulvales. In: Bae EH, Kim HS, Kwon CJ, Hwang IK, Kim GH, Klochkova TA (eds) Algal Flora of Korea. Volume 1, Number 1. Chlorophyta: Ulvophyceae: Ulotrichales, Ulvales, Cladophorales, Bryopsidales. Marine Green Algae. National Institute of Biological Resources, Incheon, pp 7–52

Bliding C (1963) A critical survey of European taxa in Ulvales. Part I. Capsosiphon, Percursaria, Blidingia, Enteromorpha. Op Bot Soc Bot Lund 8:1–160

Bliding C (1968) A critical survey of European taxa in Ulvales. II. Ulva, Ulvaria, Monostroma, Kornmannia. Bot Notiser 121:535–629

Blomster J, Maggs CA, Stanhope MJ (1998) Molecular and morphological analysis of Enteromorpha intestinalis and E. compressa (Chlorophyta) in the British Isles. J Phycol 34:319–340

Blomster J, Bäck S, Fewer DP, Kiirikki M, Lehvo A, Maggs CA, Stanhope MJ (2002) Novel morphology in Enteromorpha (Ulvophyceae) forming green tides. Am J Bot 89:1756–1763

Brodie J, Maggs CA, John DM (2007) Green Seaweeds of Britain and Ireland. British Phycological Society, London, UK. 242 pp

Dawes CJ, Mathieson AC (2008) The seaweeds of Florida. University Press of Florida, Gainesville, Florida, U.S.A. 591 pp 

Fletcher RL (1996) The occurrence of ‘green tides’ – a review. In: Schramm W, Nienhuis PH (eds) Marine benthic vegetation in Europe: recent changes and the effect of eutrophication. Springer, Heidelberg, pp 7–43 

Guidone M, Thornber C, Wysor B, O’Kelly CJ (2013) Molecular and morphological diversity of Narragansett Bay (RI, USA) Ulva (Ulvales, Chlorophyta) populations. J Phycol 49:979–995

Guiry MD in Guiry MD, Guiry GM (2019) AlgaeBase. World-wide electronic publication, National University of Ireland, Galway. Available from http://www.algaebase.org. Accessed: 25 June 2019

Guoying D, Feifei W, Yunxiang M, Shenghua G, Hongfan X, Guiq B (2014) DNA barcoding assessment of green macroalga in coastal zone around Qingdao, China. J Ocean Univ China 13:97–103

Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41:95–98

Harper JT, Saunders GW (2001) Molecular systematics of the Florideophyceae (Rhodophyta) using nuclear large and small subunit rDNA sequence data. J Phycol 37:1073–1082

Hayden HS, Blomster J, Maggs CA, Silva PC, Stanhope MJ, Waaland JR (2003) Linnaeus was right all along: Ulva and Enteromorpha are not distinct genera. Eur J Phycol 38:277–294

Hayden HS, Waaland JR (2002) Phylogenetic systematics of the Ulvaceae (Ulvales, Ulvophyceae) using chloroplast and nuclear DNA sequences. J Phycol 38:1200–1212

Heesch S, Broom JES, Neill KF, Farr TJ, Dalen JL, Nelson WA (2009) Ulva, UmbraUlva and Gemina: genetic survey of New Zealand taxa reveals diversity and introduced species. Eur J Phycol 44:143–154

Hiraoka M, Shimada S, Uenosono M, Masuda M (2003) A new gree-tide-forming alga, Ulva ohnoi Hiraoka et Shimada sp. nov. (Ulvales, Ulvophyceae) from Japan. Phycol Res 51:14–29

Hofmann LC, Nettleton JC, Neefus CD, Mathieson AC (2010) Cryptic diversity of Ulva (Ulvales, Chlorophyta) in the Great Bay Estuarine System (Atlantic USA): introduced and indigenous distromatic species. Eur J Phycol 45:230–239

Ichihara K, Arai S, Uchimura M, Fay EJ, Ebata H, Hiraoka M, Shimada S (2009) New species of freshwater Ulva, Ulva limnetica (Ulvales, Ulvophyceae) from the Ryukyu Islands, Japan. Phycol Res 57:94–103

Kazi MA, Kavale MG, Singh VV (2016) Morphological and molecular characterization of Ulva chaugulii sp. nov., U. lactuca and U. ohnoi (Ulvophyceae, Chlorophyta) from India. Phycologia 55:45–54

Kim HS, Boo SM, Lee IK, Sohn CH (2013) National List of Species of Korea 「Marine Algae」, Jeonghaengsa, Seoul, Korea 336 pp

Kirkendale L, Saunders GW, Winberg P (2013) A molecular survey of Ulva (Chlorophyta) in temperate Australia reveals enhanced levels of cosmopolitanism. J Phycol 49:69–81

Koeman RPT, van den Hoek C (1981) The taxonomy of Ulva (Chlorophyceae) in the Netherlands. Br Phycol J 16:9–53

Kraft LGK, Kraft GT, Waller RF (2010) Investigations into southern Australia Ulva (Ulvophyceae, Chlorophyta) taxonomy and molecular phylogeny indicate both cosmopolitanism and endemic cryptic species. J Phycol 46:1257–1277

Lee IK, Kang JW (1986) A check list of marine algae in Korea. Kor J Phycol 1:311–325

Lee YP (2008) Marine Algae of Jeju. Academy Publishing Co, Seoul, Korea. 477 pp

Lee YP, Kang SY (2002) A Catalogue of the Seaweeds in Korea. Jeju National University Press, Jeju, Korea. 662 pp

Linnaeus C (1753) Species plantarum, exhibentes plantas rite cognitas, ad genera relatas, cum differentiis specificis, nominibus trivialibus, synonymis selectis, locis natalibus, secundum systema sexuale digestas. Vol. 1. Impensis Laurentii Salvii, Holmiae [Stockholm], Sweden. 560 pp

Liu F, Pang SJ, Xu N, Shan TF, Sun S, Hu X, Yang JQ (2010) Ulva diversity in the Yellow Sea during the large-scale green algal blooms in 2008-2009. Phycol Res 58:270–279

Loughnane CJ, McIvor LM, Rindi F, Stengel DB, Guiry MD (2008) Morphology, rbcL phylogeny and distribution of distromatic Ulva (Ulvophyceae, Chlorophyta) in Ireland and southern Britain. Phycologia 47:416–429

Malta EJ, Draisma SGA, Kamermans P (1999) Free-floating Ulva in the southwest Netherlands: species or morphotypes? A morphological, molecular and ecological comparison. Eur J Phycol 34:443–454

Matsumoto K, Shimada S (2015) Systematics of green algae resembling Ulva conglobata, with a description of Ulva adhaerens sp. nov. (Ulvales, Ulvophyceae). Eur J Phycol 50:100–111

Mshigeni KE, Kajumulo AA (1979) Effects of the environment on polymorphism in Ulva fasciata Delile (Chlorophyta, Ulvaceae). Bot Mar 22:145–148

O'Kelly CJ, Kurihara A, Shipley TC, Sherweed AR (2010) Molecular assessment of Ulva spp. (Ulvophyceae, Chlorophyta) in the Hawaiian Islands. J Phycol 46:728–735

Phillips JA (1988) Field, anatomical and developmental studies on southern Australian species of Ulva (Ulvaceae, Chlorophyta). Aust Syst Bot 1:411–456

Shimada S, Hiraoka M, Nabata S, lima M, Masuda M (2003) Molecular Phylogenetic analyses of the Japanese Ulva and Enteromorpha (Ulvales, Ulvophyceae), with special reference to the free-floating Ulva. Phycol Res 51:99–108

Silva PC, Basson PW, Moe RL (1996) Catalogue of the benthic marine algae of the Indian Ocean. Univ California Publ in Bot 79:1–1259

Steffensen DA (1976) The effect of nutrient enrichment and temperature on the growth in culture of Ulva lactuca L. Aqua Bot 2:337–351

Tamura K (1992) Estimation of the number of nucleotide substitutions when there are strong transition-transversion and G + C-content biases. Mol Biol Evol 9:678–687

Tanner CE (1986) Investigations of the taxonomy and morphological variation of Ulva (Chlorophyta): Ulva californica Wille. Phycologia 25:510–520

Wolf MA, Sciuto K, Androli C, Moro I (2012) Ulva (Chlorophyta, Ulvales) biodiversity in the North Adriatic Sea (Mediterranean, Italy): cryptic species and new introductions. J Phycol 48:1510–1521

Womersley HBS (1984) The Marine Benthic Flora of Southern Australia. Part I. Government Printer, Adelaide, Australia. 329 pp

Zhao J, Jiang P, Liu Z, Wang J, Cui Y, Qin S (2010) Genetic variation of Ulva (Enteromorpha) prolifera (Ulvales, Chlorophyta) – the causative species of the green tides in the Yellow Sea, China. J Appl Phycol 23:227–233

Tables

Table 1 Comparison of morphological features between Ulva grossa sp. nov. and the relative species

Features

U. grossa sp. nov.

U. lactuca (type)

U. ohnoi

U. fasciata

U. reticulata

U. gigantea

Blade

Distromatic

Solitary or clustered

Foliose, saxicolous or floating, fragile, easily torn, orbicular, obovate or ovate

Distromatic, thin

Becoming perforated by many pores

Variable in shape

Size (cm)

38

2070

2030

1050 (100)

36

1040

Color

Green

Green

Light green

Bright green

-

Light green

Stalk

None

None

-

Inconspicuous or absent

-

-

Dividing

Irregular

Orbicular to irregular

Often more or less split in the upper portion

Irregularly or palmately into linear

Deeply and irregularly lobed or divided

Entire and rounded to deeply laciniate with large marginal lobes, ruffled, frilly, or flat, sometimes rosette-like

Margin

Entire without serrations

Entire

often with microscopic serrations

Entire and smooth or ruffled

-

Entire or with macroscopic teeth by no microscopic teeth

Cell size

(W um × L um)

520 × 2035

15 × 20

1420 × 715 (upper)

1430 × 1220 (basal)

820 × 1440

-

1522 × 1215

Thickness (um)

60100

4060

3090

 

3276

3055

Pyrenoids

12

12

13

12

-

13

References

The present study

Womersley (1984); Bae (2010); Dawes and Mathieson (2008)

Hiraoka et al. (2003)

Womersley (1984); Abbott and Huisman (2004); Dawes and Mathieson (2008)

Abbott and Huisman (2004)

Brodie et al. (2007)