Terminology
In this manuscript, native, uncultured cells derived from the synovial membrane are referred to as mesenchymal progenitor cells (cSM-MPCs). Expanded cells, selected based on plastic-adherence, are referred to as mesenchymal stromal cells (cSM-MSCs) (Supplementary Figure 1)
Animal Samples
Synovial membrane (SM) was collected from the clinically normal knee joints of skeletally mature, mixed-breed dogs (Supplementary Table 1, n = 28, 18 ± 7 months of age, 25 ± 2 kg), euthanized in unrelated experiments conducted in accordance with the guidelines set by the National Central Committee for Animal Experiments (AVD #115002016531). SM from OA knee joints was collected, with the owner’s consent, during standard-of-care surgery (Supplementary Table 1; n = 22, 58 ± 37 months of age, 38 ± 12 kg) for cranial cruciate ligament rupture of client-owned dogs at the academic hospital of the Faculty of Veterinary Medicine of Utrecht University. All dogs suffered from secondary knee OA with accompanying joint effusion and increase of intra-articular soft tissue density as confirmed by radiography.
SM tissue samples were processed accordingly for histopathological examination, gene expression profiling, and cell culture experiments. For this purpose, SM was respectively (a) fixed in 4% neutral buffered formalin (NBF, Klinipath B.V., Duiven, the Netherlands) for paraffin-embedding and (immuno-) histochemical analysis, (b) snap frozen and stored at -80°C for RNA isolation, and (c) stored in αMEM (22561021, Gibco™, Thermo Fisher Scientific, Waltham, USA) supplemented with 1% ITS+ Premix (354352, Corning Life Sciences, Amsterdam, The Netherlands), and 1% penicillin/streptomycin (p/s; 10.000 U/mL, 15140122, Gibco™) for a maximum of 24 hours until tissue digestion.
Histopathological evaluation of the SM
To determine the OA status of the SM, 5 µm sections were stained with Haematoxylin/Eosin (HE) (Mayers haematoxylin (109249, Merck), 0.2% Eosin (115935, Merck)), randomized and scored blindly according to the Osteoarthritis Research Society International (OARSI) canine scoring system [16] by three observers (MT, LS, and SCM).
Synovial membrane tissue digestion and isolation of cSM-MPCs from the synovial membrane
SM tissue samples were minced, and enzymatically digested using 2 mg/mL collagenase IV (C5138, Sigma-Aldrich) and 0.08 mg/mL dispase II (17105041, Gibco™) in Hanks’ Balanced Salt Solution (HBSS; 14025050, Gibco™), at 37°C on a shaker for 2-3 hours. Thereafter, remaining undigested tissue was removed by passing the digest through an 18G needle, and subsequently through 100 µm (542000, Greiner Bio-One, Alphen aan den Rijn, The Netherlands) and 40 µm (542040, Greiner Bio-One) cell strainers, respectively. The acquired cell suspensions were centrifuged for 8 minutes at 290 g and washed twice with αMEM containing 10% fetal bovine serum (FBS; 16000044, Gibco™) and 1% p/s. The total and live cell numbers were determined with a TC20™ Automated Cell Counter (145-0101, Bio-Rad).
Colony forming unit capacity of cSM-MPCs
To evaluate the colony forming unit (CFU) capacity, cSM-MPCs of normal (n = 8) and OA (n = 12) donors were plated in 58 cm2 Petri dishes (664160, CELLSTAR®, Greiner Bio-One) at three cell densities, i.e., ± 0.25-, 0.5- and 1 × 103 cells/Petri dish (equivalent to ± 4-, 8- and 17 cells/cm2). After 10-14 days under normal culture conditions, cells were stained with 0.5% crystal violet (C0775, Sigma-Aldrich) in 100% methanol (MC1060092511, Merck Millipore) for 30 minutes. Colonies containing > 50 cells were counted in the appropriate plating density, i.e., the density wherein the individual colonies were not overlapping, and displayed as the percentage of the total seeded cell number.
Expansion of cSM-MSCs
Following isolation, cells were plated at a density of ± 3.3 × 103 cells/cm2 in T75 culture flasks (658175, CELLSTAR®, Greiner Bio-One), hereafter called cSM-MSCs. cSM-MSCs were cultured in humidified, normoxic conditions (5% CO2/21% O2) at 37°C, normal culture conditions, in expansion medium (αMEM, 10% FBS, 1% p/s, 0.1 mM ascorbic acid 2-phosphate (AsAP; A8960, Sigma-Aldrich, Saint Louis, USA), 1.25 µg/mL Fungizone (Amphotericin B, 15290018, Gibco™) and 1 ng/mL recombinant human basic fibroblast growth factor-2 (bFGF-2; PHP105, Bio-Rad)). After ± 80% confluency was reached (normal: 6.9 ± 1.5 days; OA: 9.4 ± 2 days) in passage (P) P0, cSM-MSCs were aliquoted and cryopreserved in αMEM with 20% FBS and 20% dimethyl sulfoxide (102950, Merck Millipore, Burlington, USA) at -196°C until further analysis.
Population doubling assay of cSM-MSCs until passage 10
Normal (n = 6) and OA (n = 6) cSM-MSCs were seeded in triplicate at a density of ± 6 × 103 cells/cm2 in 6-well plates (657160, CELLSTAR®, Greiner Bio-one) under normal culture conditions in expansion medium. Cells were passaged every 3-4 days up to P10. Population doublings per passage was calculated with the following formula: PD = log(Nf)−log(Ni)/log(2), where PD stands for the number of cell divisions in each passage, Nf for the cell number on the day of passaging and Ni for the initial seeding number of cells (6 × 103 cells/cm2).
Senescence assay of P0 to P10 cSM-MSCs
As senescence is thought to play a significant role in OA, it was hypothesized that cSM-MSCs derived from OA joints might undergo senescence earlier compared to normal cSM-MSCs. Therefore, a senescence assay was performed in which normal (n = 6) and OA (n = 6) cSM-MSCs were seeded at a density of 2,5 × 104 cells/cm2 in duplicate in chamber slides (PEZGS018, Millipore). After 24 hours (37°C, 5% CO2/21% O2), cells were fixed with 4% NBF and stained overnight at 37°C in the dark with 5-bromo-4-chloro-3-indolyl-β-D-galactoside (X-gal (B4252, Sigma-Aldrich), 1 mg/ml, in a solution of 40 mM citric acid/sodium phosphate, 5 mM potassium hexacyano-ferrate (II) trihydrate, 5 mM potassium hexacyano-ferrate (III), 150 mM sodium chloride and 2 mM magnesium chloride (MgCl2) in distilled water (pH 6.0)). To visualize nuclei, a counterstain with DAPI (62248, ThermoFisher) was performed. Sections were mounted with FluorSave (345789, VWR), and imaged using Olympus BX43 microscope (Olympus, Tokyo, Japan). Analysis of the percentage of senescent cells was performed with ImageJ (version 1.48) using the Senescence Counter [22], which uses the amount of DAPI positive nuclei to determine the amount of X-gal positive cells.
Tri-lineage differentiation assay of P2 cSM-MSCs
Tri-lineage differentiation of the cSM-MSCs was performed in P2 as per methods described previously [23], with some small adaptations. For chondrogenic differentiation, normal (n = 7), and OA (n = 8) P2 cSM-MSCs were cultured in pellets of 100.000 cells/well in a 96-well plate (Corning® Costar® 7007) in chondrogenic differentiation medium (DMEM high glucose (31966, Invitrogen), 1% p/s, 1% ITS+ Premix, 0.04 mg/mL proline (P5607, Sigma), 0.1 mM AsAP and 10− 7 M dexamethasone (D1756, Sigma)) with the addition of 10 ng/mL recombinant human transforming growth factor-β1 (TGF-β1; 240-B, R&D Systems, Minneapolis, USA) and 100 ng/mL recombinant human bone morphogenetic protein-2 (BMP-2; 355-BM, R&D systems). After 21 days of culture (37°C, 5% CO2/21% O2), pellets were collected for histological (n = 3/donor/condition) and biochemical (n = 3/donor/condition) evaluation. Histological evaluation of glycosaminoglycan (GAG) deposition using Toluidine blue O (0.04%, Sigma; Basic Blue 17, 86% dye, dissolved in 0.2 M acetate buffer), biochemical analysis of GAG release and deposition using a dimethyl methylene blue (DMMB, Sigma) assay, and determination of the DNA content using the Qubit™ dsDNA HS Assay (Thermofisher Scientific), were performed as per methods described previously [23] .
For osteogenic and adipogenic differentiation, normal (n = 6) and OA (n = 6) P2 cSM-MSCs were seeded at a density of ± 1×103 (osteogenic) or ±4×103 (adipogenic) cells/cm2 in 6-well plates. Technical duplicates per donor were cultured in osteogenic differentiation medium (DMEM with 10% FBS, 0.1 mM AsAP, 1.25 µg/mL Fungizone, 10 mM β-glycerophosphate (G9422, Sigma-Aldrich) and 10−7 mM dexamethasone) or adipogenic differentiation medium (DMEM with 10% FBS, 0.1 mM AsAP, 1.25 µg/mL Fungizone, 10−6 mM dexamethasone, 0.2 mM indomethacin (I7378, Sigma-Aldrich), 0.01 mg/mL recombinant human insulin (I9278, Sigma-Aldrich), 0.5 mM 3-isobutyl-1-methylxanthine (I5879, Sigma-Aldrich) and 5 µM rosiglitazone (R2408, Sigma-Aldrich)). Negative controls received expansion medium. After 21 days, cell monolayers were fixed with 4% NBF, and stained with Alizarin Red S staining solution (2% Alizarin Red S (A5533, Sigma-Aldrich) for evaluation of calcium deposits or Oil Red O staining solution (0.3% Oil Red O (O0625, Sigma-Aldrich) for evaluation of intra-cellular lipid droplets.
Gene expression analysis by RT-qPCR of native SM tissue and P2 cSM-MSCs
Snap frozen SM tissue samples wrapped in aluminium foil were reduced to powder using a hammer. After lysis of the homogenate with QIAzol Lysis Reagent (79306, Qiagen, Venlo, the Netherlands), total RNA was extracted using the RNeasy Mini Kit (74104, Qiagen) according to the manufacturer’s instructions, including an on-column DNase step. Total RNA of P2 cSM-MSCs was isolated using the RNeasy Micro kit (74004, Qiagen), after lysis with RLT buffer containing 1 mg/ml 2-mercaptoethanol (M3701, Sigma-Aldrich, Saint Louis, USA). RNA quality and quantity were measured with a Bioanalyzer (Agilent RNA 6000 Nano Kit, Agilent Technologies, Amstelveen, the Netherlands). Subsequently, cDNA was produced using the iScriptTM cDNA Synthesis Kit (Bio-Rad, Lunteren, the Netherlands) with a similar RNA input for all samples (SM tissue: 200 ng, P2 cSM-MSCs: 350 ng), following manufacturer´s instructions.
Quantitative RT-PCR was performed using IQ SYBR Green SuperMix and a CFX384 Touch™ Real-Time PCR Detection System (Bio-Rad) according to the manufacturer’s protocols. Pathways related to (synovial) inflammation, the chondrogenic and osteogenic lineage, and SM and MPC markers were investigated using canine specific primers (Table 1). Gene expression of MPC markers was included because canine specific antibodies were not available for all common MPC CD markers. Relative expression was estimated using the efficiency-corrected delta-delta Ct (ΔΔCt) method, employing 7 reference genes (Table 1). If the mean Cq value of reference genes was above 35, the sample was excluded.
Table 1
RT-qPCR primers. F: Forward; R: Reverse
Category
|
Gene
|
Primer Sequence
|
Annealing temperature (°C)
|
Synovial membrane
|
PRG4
|
F: CCCATATACTTGCTGCTCCT
|
60
|
|
|
R: GCATCTCTAGAATACCCTTCCC
|
|
|
CD55
|
F: GCTTCACCCTGATTGGAGAG
|
60
|
|
|
R: CTGTAGAAGTCTGAGAACCTCTG
|
|
|
HAS2
|
F: TTGACCCTGCCTCATCTG
|
59
|
|
|
R: AGCCATCCAGTATCTCACA
|
|
Alarmins
|
S100A8
|
F: GCCATAAACTCCCTCATTGAG
|
63
|
|
|
R: ACTCTTGGAACCAGGTGTC
|
|
|
S100A9
|
F: GAGACCATCATCAACATCTTCC
|
58
|
|
|
R: TGATCTTGTTTATGGCGTTGTC
|
|
MMPs
|
MMP-3
|
F: CCCAAGTGGAGGAAAACTCA
|
60
|
|
|
R: CACCTCCTTCCAGACATTCAG
|
|
|
MMP-9
|
F: CGCATGACATCTTCCAGTACCA
|
63
|
|
|
R: CCGAGAATTCACACGCCAGTA
|
|
Cytokines/ Chemokines
|
IL-1B
|
F: TGCTGCCAAGACCTGAACCAC
|
68
|
|
|
R: TCCAAAGCTACAATGACTGACACG
|
|
|
IL-6
|
F: GAGCCCACCAGGAACGAAAGAGA
|
65
|
|
|
R: CCGGGGTAGGGAAAGCAGTAGC
|
|
|
IL-8
|
F: CTGTTGCTCTCTTGGCAGC
|
63
|
|
|
R: GGGATGGAAAGGTGTGGAG
|
|
|
IL-18
|
F: GAGGATATGCCCGATTCTGA
|
56
|
|
|
R: TCCGGAGGACTCATTTCTG
|
|
|
CCL2
|
F: AGCCAGATGCAATTATTTCTCC
|
60
|
|
|
R: GACGGTCTTGAAGATCACAG
|
|
|
COX2
|
F: TTCCAGACGAGCAGGCTAAT
|
60
|
|
|
R: GCAGCTCTGGGTCAAACTTC
|
|
Reference genes
|
HPRT
|
F: AGCTTGCTGGTGAAAAGGAC
|
58
|
|
|
R: TTATAGTCAAGGGCATATCC
|
|
|
RPL13
|
F: GCCGGAAGGTTGTAGTCGT
|
61
|
|
|
R: GGAGGAAGGCCAGGTAATTC
|
|
|
RPS5
|
F: TCACTGGTGAGAACCCCCT
|
62
|
|
|
R: CCTGATTCACACGGCGTAG
|
|
|
RPS19
|
F: CCTTCCTCAAAAAGTCTGGG
|
62
|
|
|
R: GTTCTCATCGTAGGGAGCAAG
|
|
|
SDHA
|
F: GCCTTGGATCTCTTGATGGA
|
61
|
|
|
R: TTCTTGGCTCTTATGCGATG
|
|
|
TBP
|
F: CTATTTCTTGGTGTGCATGAGG
|
57
|
|
|
R: CCTCGGCATTCAGTCTTTTC
|
|
|
YWHAZ
|
F: CGAAGTTGCTGCTGGTGA
|
58
|
|
|
R: TTGCATTTCCTTTTTGCTGA
|
|
Category
|
Gene
|
Primer Sequence
|
Annealing temperature (°C)
|
CD markers
|
CD29
|
F: GATGCCTACAACTCCCTTTCCTCA
|
58
|
|
|
R: CATTTTCCCCTGTTCCATTCACC
|
|
|
CD34
|
F: TCAGGGCCCCCGACATCTC
|
65
|
|
|
R: TCTCTGCTCACCCCTCTGGAAAAA
|
|
|
CD44
|
F: CTTCTGCAGATCCGAACACA
|
60
|
|
|
R: GAGTAGAAGCCGTTGGATGG
|
|
|
CD73
|
F: CTCCAACACATTCCTTTACAC
|
61
|
|
|
R: ACTCAACCTTCAAATAGCCT
|
|
|
CD90
|
F: CAGCATGACCCGGGAGAAAAAG
|
63
|
|
|
R: TGGTGGTGAAGCCGGATAAGTAGA
|
|
|
CD105
|
F: CATCCTTCACCACCAAGAG
|
60
|
|
|
R: CAGATTGCAGAAGGACGG
|
|
|
CD146
|
F: GGGAATGCTGAAGGAAGG
|
63
|
|
|
R: CTTGGTGCTGAGGTTCTG
|
|
|
CD166
|
F: AAGCGTCATAAACCAAACAG
|
61
|
|
|
R: TATAGCAGAGACATTCAAGGAG
|
|
|
VCAM-1
|
F: CTACAAGTCTACATCTCACCCA
|
58
|
|
|
R: TTCCAGAATCTTCCAGCCTC
|
|
Chondrogenic markers
|
ACAN
|
F: GGACACTCCTTGCAATTTGAG
|
61
|
|
|
R: GTCATTCCACTCTCCCTTCTC
|
|
|
SOX9
|
F: CGCTCGCAGTACGACTACAC
|
62
|
|
|
R: GGGGTTCATGTAGGTGAAGG
|
|
|
COL2A1
|
F: GCAGCAAGAGCAAGGAC
|
65
|
|
|
R: TTCTGAGAGCCCTCGGT
|
|
|
COL1A1
|
F: GTGTGTACAGAACGGCCTCA
|
61
|
|
|
R: TCGCAAATCACGTCATCG
|
|
Osteogenic markers
|
SPARC
|
F: TCTGTATGAAAGGGATGAGGAC
|
64
|
|
|
R: GCTTCTCGTTCTCGTGGA
|
|
|
RUNX2
|
F: AACGATCTGAGATTTGTGGGC
|
64
|
|
|
R: TGTGATAGGTGGCTACTTGGG
|
|
|
BGLAP
|
F: CTGATGGTCCTTGCCCT
|
62
|
|
|
R: CTTGGACACGAAGGTTGC
|
|
|
PTHR1
|
F: GACCACATCCTTTGCTGG
|
51
|
|
|
R: CAAACACCTCCCGTTCAC
|
|
Flow cytometry of cSM-MPCs and P2 cSM-MSCs
Surface marker expression of normal and OA cSM-MPCs was conducted directly after digestion (n = 10 per conditions, ± 0.5–1 × 106 cells/reaction) and P2 cSM-MSCs (n = 8 per condition, ± 1–2 × 105 cells/reaction). Zombie Violet™ Fixable Viability Kit (423114, BioLegend, San Diego, USA; concentration proprietary) was diluted 1:500 in flow cytometry staining buffer (00-4222-26, Invitrogen) and used at 1 µl/L × 104 cells. Cells were incubated in Zombie Violet™ for 15 to 30 minutes at room temperature (RT), protected from light. Subsequently, cells were washed with 400 µL flow cytometry staining buffer (00-4222-26, Invitrogen) and resuspended in 50 µL buffer. At this point, cells were incubated with a combination of antibodies against surface markers CD90, CD44, CD73, CD271, CD34 and CD45 (Table 2) for 15 minutes at 4°C in the dark. One reaction per donor was left unstained as a negative control. Following antibody incubation, cells were washed with staining buffer and transferred to 5 mL Falcon® round-bottom polypropylene tubes (352063, Corning Life Sciences) for data acquisition. Data collection was performed with CytExpert Software (Version 2.2.0.97, Beckman Coulter, Brea, USA) on a CytoFLEX S Flow Cytometer (Beckman Coulter) and analysed using CytExpert Software version 2.2.0.97. Firstly, small debris was excluded in forward scatter (FSC)/side scatter (SSC) plots. Then, unstained reactions were used to distinguish between background and specific fluorescence signal of each antibody. Based on these gates, the relative numbers of positively or negatively stained events were determined. Dead and hematopoietic cells were excluded by negatively selecting for Zombie Violet™/CD45-stained events, and percentages of CD90, CD73, CD44, CD34 and CD271 positively stained events were evaluated within the CD45- fraction.
Table 2
Antibodies used in flow cytometry. No.: Number; PE: R-Phycoerythrin; FITC: Fluorescein isothiocyanate
Target
|
Catalog No.
|
Manufacturer
|
Host
|
Reactivity
|
Clone
|
Fluorochrome
|
CD90
|
12-5900-42
|
eBioscience
|
Rat
|
Dog
|
YKIX337.217
|
PE
|
CD73
|
bs-4834R
|
Bioss antibodies
|
Rabbit
|
Human, Mouse, Rat, Dog, Chicken
|
Polyclonal
|
FITC
|
CD271
|
12-9400-42
|
Invitrogen
|
Mouse
|
Dog, Human, Mouse
|
ME20.4
|
PE
|
CD44
|
11-5440-42
|
Invitrogen
|
Rat
|
Dog
|
YKIX337.8
|
FITC
|
CD45
|
48-5450-42
|
Invitrogen
|
Rat
|
Dog
|
YKIX716.13
|
eFluor 450
|
CD34
|
FAB3346S
|
R&D
|
Mouse
|
Dog
|
IH6
|
Alexa Fluor 750
|
Immunohistochemical evaluation
To assess the location of cMPCs in the native SM immunohistochemical staining of the MPC markers CD90 (ab92574, Abcam), CD73 (LS‑B8284, IHCPlus), CD44 (MA1-10225, ThermoFisher Scientific), CD271 (14-9400-82, eBioscience) and CD34 (bs-0646R, Bioss Antibodies) was performed (extensive protocols provided in Supplementary Table 2). For the quantification, images were captured using an Olympus BX51 microscope (Olympus, 100x magnification). Three to six random regions of interest (ROIs) were captured based on availability and analysed by a veterinary pathologist (SAK). The captured images were imported in the Image ProPlus 6.0 software (Media Cybernetics) to quantify the percentage of DAB-stained area.
Statistical analyses
Statistical analysis was performed using R Statistics (R version 3.6.3 [24], RStudio version 1.2.5033 [25]). Normality was tested via QQ plots, histograms, and Shapiro Wilk tests. If the data were normally distributed, linear mixed models were employed. If the data was not normally distributed, a Kruskal–Wallis test and Dunn’s Multiple Comparison Test were used. P values of the RT-qPCR analysis were subjected to corrections for multiple testing (Benjamini-Hochberg False Discovery Rate). Effect sizes (ES) with 95% confident intervals (CI) were calculated using Hedge’s g (HG) for normally distributed data and Cliff’s delta (CD) for non-normally distributed data. Outcomes were considered relevant if p < 0.05 or p < 0.1 with a large ES. Furthermore, a difference was considered biologically relevant if the expression was undetectable in one of the groups.