Preparing CFPH
The hydrolysis process on chicken feathers (CF) was realized by using a modified method employed by Taşkın and Kurbanoğlu (2011) and Taşkın et al. (2012). Briefly, chicken feathers were dried at 70 °C until a constant weight after washing with distilled water. Then, it was ground with a Waring blender until becoming a feather powder. A 100 g of CF powder was added into a 250 mL of KOH solution (2 N) in a glass tube and the tube including CF powder was subjected to hydrolysis processes for 60 h with gently stirring (150 rpm) on a shaker. The obtained alkaline extract was neutralized with H3PO4 (10 N) and then infiltrated by Whatman filter paper to remove the particles that are non-hydrolyzable. Then, it was dried at 80 °C until it became powder and called chicken feather protein hydrolysate (CFPH). Aqueous solutions (0.1%, w/v) of CFPH were prepared from the obtained dried powder by dissolving in sterile pure water. The final pH value of the solutions was adjusted to 6-6.5. Amino acid content determination was carried out by Düzen Norwest Laboratory (Environmental, Food, and Veterinary Health Services Training and Consulting Trade Co., Ankara, Turkey) using Varian CP-3800 gas chromatograph (Varian Inc., Palo Alto, Calif., USA) and rapid amino acid analysis kits (Phenomenex Inc., Torrance, Calif., USA).
Plant material and CFPH application
Altındane and Bezostaya varieties of wheat (Triticum aestivum L., cvs.) were used as plant material and seeds were obtained from Karadeniz Agricultural Research Institute and Geçit Kuşağı Agricultural Research Institute. After seed sterilization, prepared soils with sand+peat mixture (3:1) were filled into pots, and swelled seeds with distilled water were planted in equal amounts in each pot. Seedlings were grown in a climate chamber under controlled conditions (20,000 lux, 70% humidity, at 23/20 oC and 14/10 h, light-dark) and irrigated daily with an equal amount of distilled water and also once with Hoagland nutrient solution. The aqueous solution of CFPH (0.1%, w/v) was sprayed once to the leaves of 11-day seedlings. Also, the same amount of distilled water was used for the untreated group. Twelve hours after the application, the CFPH-treated and the untreated seedlings (control) were transferred in a climate chamber at 5/2 oC (15,000 lux, 50% humidity, and 14/10 h, light-dark). After 3 days, all the seedlings were harvested to use for physiologic and biochemical experiments.
Determining plant growth, soluble sugar, and pigment content
Plant growth was determined by measuring root and shoot lengths of seedlings and then their dry weights were determined after incubation for 48 h at 70 °C. Chlorophyll and carotenoid content were detected as spectrophotometrically at fresh leaves according to the method of Lichtenthaler (1987) and were submitted as mg/g fresh tissue. Soluble sugar content was measured according to the phenol-sulphuric method (Dubois et al. 1956). Dried leaves (1 g) were powdered and 5 mL of ethanol (70%) was added to the powdered leaves. The mixture in a tube was incubated in a water bath for 45 min at 75 °C. The tubes were centrifuged for 10 min at 3500xg and obtained supernatant was diluted at a rate of 1/10 with ethanol (70%). Then, a reaction mixture (3 mL) was prepared to include 100 mL of the supernatant, 300 mL of saturated phenol, and 2.6 mL of concentrated H2SO4. The absorbance of the mixture was monitored as spectrophotometrically at 480 nm for pentose and 488 nm for hexoses. Data is submitted as mg/g dry tissue in comparison with a standard chart prepared by using pure fructose and glucose.
Determining Rubisco expression via Western Blot analysis
After SDS-PAGE of total soluble proteins, polypeptides were transferred in a nitrocellulose membrane (0.45 mm) using a buffer containing 13 mM Tris (pH: 7.2), methanol (10%), and 190 mM glycine for 50 min at 15 volts. The membrane was enclosed in a buffer (Tris-HCl; 20 mM, pH 7.6) including Tween-20 (0.1%), NaCl (140 mM), bovine serum albumin (3%), and powdered milk (2%), and incubated throughout a night at 4 °C. After the membrane was bathed with Tween-20 (0.1%), it was incubated in powdered milk (2%) including Tween-20 (0.1%) and the monoclonal antibody of Rubisco (Ribulose-1,5-bisphosphate carboxylase/oxygenase; EC 4.1.1.39) for one hour at room conditions. Subsequently, the membrane bathed with Tween-20 (0.1%) was incubated in powdered milk (2%) including Tween-20 (0.1%) and secondary antibody for 1 hour at room conditions. Then, the membrane was bathed with Tween-20 (0.1%) and distilled water, respectively. Interacting antibodies were determined by using a chemiluminescent substrate (Genç and Atıcı 2019).
Determining ROS and lipid peroxidation level
Endogenous H2O2 level was measured by the method of Hu et al. (2005). Tissue (0.5 g) was homogenized in 10 mL of cold acetone and centrifuged at 5000xg for 15 min at 4 °C. One-half mL of supernatant was mixed with 0.15 mL of 5% Ti(SO4)2 and 0.3 mL of 19% NH4OH. The mixture was centrifuged at 3000xg for 10 min at 4 °C. The obtained pellet was washed two times with cold acetone and dissolved in 3 mL of 1 M H2SO4. After filtering, absorbance measurement was carried out at 415 nm versus blank. Data were expressed as ng/g fresh tissue. Superoxide anion (O2.−) content was determined by using XTT {(2,3-bis (2-methoxy-4-nitro-5-sulfophenyl)-5-[(phenylamino) carbonyl]-2H-tetrazolium hydroxide} (Frahry and Schopfer 2001). Fresh tissue (0.5 g) was ground in a 5 mL of 500 mM XTT (pH 7.0) with or without 3.5 U/mL superoxide dismutase. Two hours later, the homogenate was centrifuged at 10000xg for 10 min at 4 °C. Then, 1 mL of the supernatant was mixed with 0.9 mL of 65 mM phosphate buffer (pH 7.8) and 0.1 mL of 10 mM hydroxylamine hydrochloride. After the mixture was incubated at 25 °C for 15 min, 1 mL of the mixture, 1 mL of 17 mM anhydrous amino benzene sulfonic acid, and 1 mL of 17 mM 1-naphthylamine were mixed and incubated at 25 °C for 20 min. A 3 mL aliquot of butyl alcohol was added to the mixture and the absorbance was measured at 530 nm. Sodium nitrite (NaNO2) was used for the standard curve to calculate the content of superoxide. Lipid peroxidation level (LPO) is determined by measuring malondialdehyde (MDA) level (Heath and Packer 1968). Tissue (0.5 g) was homogenized in 5 mL of 1% TCA and centrifuged at 12000xg for 20 min. One mL of the supernatant obtained was mixed with 4 mL of 0.5% TBA (thiobarbituric acid) in 20% TCA (trichloroacetic acid). The reaction mixture was incubated for 30 min at a boiling water bath, and the reaction was terminated in an ice bath. The samples were once more centrifuged at 5000xg for 10 min. The absorbance of the supernatant was followed at 532 nm and it was corrected by subtracting non-specific absorbance at 600 nm. MDA level was expressed as nmol/g fresh tissue.
Determining non-enzymatic antioxidants
Reduced glutathione (GSH) and oxidized glutathione (GSSG) content were determined enzymatically by using the method of Griffith (1980). Fresh tissue (0.2 g) was homogenized in 2 mL of 5% meta-phosphoric acid and centrifuged at 12000×g for 20 min. For total GSH, 150 mL of the obtained meta-phosphoric extract was mixed in an Eppendorf tube with 1050 mL of KH2PO4, (50 mM, pH 7.5), 200 mL of EDTA (2.5 mM), 200 mL of DTNB (1 mM), 200 mL of GR (0.3 unit), 200 mL of NADPH (1 mM M) in a final volume of 2 mL at 25 °C. The reaction was started with the addition of 200 mL of NADPH, and the increase in absorbance at 412 nm was monitored for 3 min at 25 °C. For GSSG, 150 mL of the meta-phosphoric extract was neutralized with 96 mL of 1 M triethanolamine. Then, 8 mL of 2-vinylpyridine was added to the extract. The mixture was allowed to incubate for 60 min at 25 °C. Then, 228 mL of the derivatized extract was added to the reaction medium consisting of 0.972 mL of KH2PO4, (50 mM, pH 7.5), 200 mL of EDTA (2.5 mM), 200 mL of DTNB (1 mM), 200 mL of GR (0.3 unit), 200 mL of NADPH (1 mM M) in a final volume of 2 mL at 25 oC. ReaThe reactions started with the addition of 200 mL of NADPH, and the increase in absorbance at 412 nm was recorded for 3 min at 25 °C. Calibration curves were drawn using standards of GSH (1.6–80 mM) and GSSG (0.8–40 mM) prepared in 2% (w/v) meta-phosphoric acid. Reduced GSH was total GSH-GSSG. The contents of reduced (AsA) and oxidized (DHA) ascorbate were determined as described by Genç and Atıcı (2019). Briefly, a 0.2 g powdered sample in liquid nitrogen was extracted in 2 mL of 5% TCA. The homogenate was centrifuged at 12000xg for 20 min at 4 oC. Ten mL of 5 M NaOH was added to 400 mL of supernatant and it was equally divided into two parts. The first mixture was combined with 200 mL of KH2PO4 (150 mM, pH 7.4) and 200 mL of distilled water. The second mixture was combined with 200 mL of KH2PO4 (150 mM, pH 7.4), 100 mL of DTT (10 mM), and 100 mL of N-ethylmaleimide (0.5%). In both mixtures were added separately to 400 mL of 10% TCA, 400 mL of 44% H3PO4, 400 mL of 2,2¢-dipyridyl (4% in ethanol 70%) and 150 mL of 3% FeCl3. Both samples were incubated at 37 °C for 60 min and the absorbance of the samples was recorded at 525 nm. Standard curves of AsA and DHA were prepared in 5% (w/v) TCA. The first mixture gives reduced ASA and the second mixture gives total ASA. DHA is extracted from II to I (DHA= II-I). For soluble phenolic compound, fresh plant tissue (0.2 g) was homogenized in 2 mL of KH2PO4 (pH: 7.4), and obtained homogenate was centrifuged at 12000xg for 15 min at 4 °C. Total phenol content was determined using Folin-Ciocalteu reagent (FCR) and gallic acid as standard (McDonald et al. 2001). The samples of the extract (0.5 mL) were added to 2.5 mL of 10% (v/v) FCR after 6 min, 2 mL of sodium carbonate (Na2CO3, 7.5%) was added to the mixture. After 1 h of reaction, the absorbance of the mixture was measured at 765 nm in a spectrophotometer. Blank is formed from a like sample that does not contain extract. Total phenol content was determined with the use of an external standard curve and expressed as mg gallic acid/mg fresh weight of tissues. Soluble proline content was determined according to the method of Bates et al. (1973). Total proline content was determined with the use of an external standard curve and expressed as micromoles per gram of fresh weight.
Activity assay of enzymatic antioxidants
Fresh tissue (0.2 g) was ground in 2 mL of extraction buffer (0.1 M KH2PO4 buffer, pH: 7.0) containing 0.2% polyvinylpyrrolidone and 1 mM EDTA, and the homogenate was centrifuged at 12000xg for 15 min at 4 °C. Protein content was determined according to the method of Bradford (1976). A protein standard curve was generated using bovine serum albumin. Antioxidant enzyme activities were assayed according to the method of Nakano and Asada (1981). One unit of superoxide dismutase (SOD, EC 1.15.1.1) activity was defined as the amount of enzyme that inhibited 50% photoreduction of nitroblue tetrazolium chloride. The activity was expressed as EU/min/mg protein. Guaiacol peroxidase activity (GPX, EC 1.11.1.7) was assayed by determining absorbance increase at 470 nm caused by tetraguaiacol which is a product of the reaction in which guaiacol and H2O2 are used as substrate. One unit of GPX is defined as the amount of enzyme that increased absorbance at a rate of 0.01 within 1 min at 25 °C, and data are expressed as EU/min/mg protein. Catalase (CAT, EC 1.11. 1.6) activity is based on the measurement of the decrease in absorbance at 240 nm when CAT provides the conversion of H2O2 to O2 and H2O. One unit of CAT is determined as the amount of enzyme disrupted 1 mM H2O2 within 1 min at 25 °C, and data are expressed as EU/min/mg protein. For ascorbate peroxidase (APX, EC 1.11.1.11) activity, the reaction mixture (3 mL) contained 0.5 mM ascorbic acid (AsA), 2 mM H2O2, 0.1 mM EDTA in 50 mM KH2PO4 buffer (pH 7.0). One unit of APX activity is defined as the amount required to decompose 1 mM oxidized ASA/min/mg protein. Glutathione reductase (GR, EC 1.6.4.2) activity was determined by monitoring glutathione-dependent oxidation of NADPH at 340 nm. Reaction mixture included 0.2 mM NADPH, 1 mM EDTA, 3 mM MgCl2, 0.5 mM oxidized glutathione (GSSG) and 100 mM Tris-HCl (pH 7.8). Data were expressed as EU/min/mg protein.
Native PAGE for isoenzyme staining of antioxidant enzymes
Native proteins were run on PAGE under non-denaturing conditions as suggested by Laemmli (1970). For SOD activity staining, the gel was incubated in 0.2 M sodium acetate buffer (pH 5) containing 30 mM H2O2 and 10 mM guaiacol in dark for 30 min at 37 °C, and then proteins were monitored after incubation for 30 min in 0.05 M phosphate buffer (pH 7.8) containing 1 mM EDTA (Weydert and Cullen 2010). GPX isoenzymes were monitored according to Weydert and Cullen (2010). Activity staining was realized after incubation for 30 min in 0.2 M sodium acetate buffer (pH 5.0) containing 30 mM H2O2 and 10 mM guaiacol. For CAT isoenzymes, the gel was incubated in 30 mM H2O2 for 10 min, it was stained with 2% FeCl3 and 2% K3FeCN6 solutions (Weydert and Cullen 2010). GR staining was carried out by incubating in a reaction solution including 250 mM Tris-HCl buffer (pH 8.4), 2 mM EDTA, 1 mM NADPH, 2 mM DTNB and 4 mM GSSG (Rao et al. 1996). For APX activity, the gel was at first incubated for 30 min in 0.05 M phosphate buffer (pH 7.0) containing 2 mM ascorbic acid and then incubated for 20 min in the same buffer containing 4 mM ASA and 2 mM H2O2. After this, staining was performed with 50 mM phosphate buffer (pH 7.8) containing 28 mM TEMED and 2.4 mM NBT (Rao et al. 1996).
Statistical Analysis
After each experiment was repeated at least three times, the statistical analysis of data obtained was conducted using SPSS 13.0, and means were compared by Duncan’s Multiple Range Test at a 0.05 level of confidence.