Cell culture
HK-2 is a human proximal tubule cell line from the kidney, provided by Hong Kong Biotechnology Limited. Shanghai FuHeng (Shanghai FH0228, China). After a while, cells were subcultured using RPMI - 1640 (SH30809.01 B; Hyclone) medium including 10% FBS (10270106; Gibco). Cell differentiation was induced by 1% dual antibiotics without interferon γ in a 5% CO2 incubator incubated under 37°C for 10-14 days. The medium was substituted daily or every other day depending on the growth of the cells. In addition, HK-2 cells were given 5.5 mM glucose (termed NG group) or 30 mM glucose (termed HG group) for 24 h when HG was administered. The mTOR inhibitor rapamycin (100nmol/L) was purchased from Selleck (S1039) treated cells. Recombinant rat Netrin-1 was obtained from R&D Systems (6419-N1-025). HK-2 cells were treated with the specified concentration of Netrin-1 (0 or 20ng/ml) for 24 h.
Western blotting
Cell proteins were extracted with RIPA lysis buffer (Solarbio, P0013B) and electrophoretized with 10% SDS-Page gel. After the membrane was transferred to PVDF, anti-Netrin-1 (20235-1-AP; proteintech), anti-cleavage Caspase 3(#9664T; cst), anti-Bax (#14796; cst), anti-Bcl-2 (ab1722; millipore), anti-LC3 (#12741S; cst), anti-p62 (#5114S; cst), anti-Beclin-1 (#3738S; cst), anti-p-AKT (#4060S; cst), anti-AKT (#4691; cst), anti-p-mTOR (ab109268; abcam), anti-mTOR (ab134903; abcam), anti-mouse IgG (HRP,#7076, cst), anti-rabbit IgG(HRP, #7074; cst) and anti-GAPDH (#5174; cst). After PBS washing and incubation with secondary antibody, the membrane was visualized using intesive chemiluminescence (ECL) detection system (Santa Cruz Biotechnology).
Cell apoptosis analysis
Apoptosis rate was detected by flow cytometry (40302ES20; YEASENusing) Annexin V-FITC/PI staining. In simple terms, different groups of cells are treated with trypsin. HK-2 was originally digested with 0.25% trypsin (without EDTA), centrifuged for 5 min, and then suspended with PBS. The cells were incubated with 300 μL binding buffer and stained with Annexin V-FITC (5 μL) and PI (10 μL).
RNA extraction and real-time quantitative PCR (RT-qPCR)
Total RNA was extracted with Trizol reagent (Invitrogen, CA) and reversed transcribed into complementary DNA (cDNA) using Prime Script RT Reagent Kit (Takara). SYBR Premix Ex Taq II (Takara Bio, Otsu, Japan) was used to detect gene fold change by RT-qPCR. The mRNA levels of target genes were normalized to GAPDH. Primer sequences are as follows:
Netrin-1: 5’-TGCAAGCCCTTCCACTACG-3′ (F) and 5’- TGTTGTGGCGACAGTTGAGG-3′ (R); GAPDH: 5’- GGAGCGAGATCCCTCCAAAAT-3′ (F) and 5’- GGCTGTTGTCATACTTCTCATGG-3′ (R).
GFP-mRFP-LC3 adenoviral transfection
HK-2 cells were placed in a glass substrate petri dish and infected with an adenovirus vector containing GFP-MRFP-LC3 (Asia-Vector Biotechnology, Shanghai Co.LTD). Fresh medium was used instead of medium, and HK-2 was incubated for one day.
Then, confocal laser scanning microscope (OLYMPUS; FV1000) was used to observe HK-2 in order to monitor autophagy flux and assess the number of yellow and green dots.
Actin cytoskeletal disorder score
F-actin in HK-2 cells was stained with TRITC Phalloidin (G1401, purchased from Servicebio, China) and the images were observed under a Zeiss (Zeiss, Jena, Germany) fluorescence microscope.The cells were inoculated into a 24-well plate with a glass lid and fixed in PBS with 4% paraformaldehyde. 0.5% Triton X-100 in PBS can pass through the cell membrane. DAPI (G1012, Servicebio) and TRITC Phalloidin (100 nM; G1401, Servicebio, Wuhan, China) for cell structure staining. For the semi-quantitative analysis of actin cytoskeleton disorder, we conducted a scoring study according to the above method [8]. The disorganized regions of F-actin stained by Phalloidin were defined as disordered regions.
Statistical Analysis.
The data are expressed as mean ± SEMs. One way ANOVA followed by Bonferroni correction was used to analyze means between more than two groups. Unpaired t-test was used to analyze data when two groups were present. GraphPad Prism software was used for statistical analyses. All experiments were repeated at least 3 times, and representative experiments are shown. P<0.05 was considered as statistically significant.