Isolation of human osteoprogenitor cells and osteogenic differentiation
Human bones obtained from surgery were cut into small bone chips using a sterilized rongeur and operating scissors, and attached tissues around the bone chips were removed. The bone chips were washed with phosphate-buffered saline (PBS, Hyclone, UT, USA) containing 1% penicillin-streptomycin (P/S, Gibco, MA, USA) to remove non-adherent bone marrow cells. After washing twice, the bone chips were placed in cell culture plates to isolate osteoprogenitor cells and incubated in Dulbecco’s modified eagle medium (DMEM, Hyclone) containing 10% fetal bovine serum (FBS, Gibco) and 1% P/S, followed by outgrowth culture methods [18, 19]. Isolated osteoprogenitor cells cultured to passage 2–4 were used in the experiments. For osteogenic differentiation, these cells were stimulated using osteogenic media containing supplements of 50 µM ascorbic acid (Sigma-Aldrich, MO, USA), 10 mM β-glycerophosphate (Santa Cruz, TX, USA), and 100 nM dexamethasone (Sigma-Aldrich), as described in our previous studies [20, 21]. Osteogenic media were changed every 3 days.
Microarray and RNA sequencing
Microarray data with human osteoprogenitor cells were analyzed with genes changed by osteogenic differentiation and were screened by canonical and non-canonical WNT/β-catenin signaling-related molecules. RNA sequencing was analyzed with changed genes by DKK1 and screened by DKKs and WNT/β-catenin signaling related molecules. All data visualization was conducted using MeV.
DKK1 overexpression and knockdown
For DKK1 overexpression, human osteoprogenitor cells were transfected with DKK1 (HG10170-CY) and an empty plasmid (CV013) using Lipo3000 (Thermo Fisher, MA, USA) for 48 h. These plasmids were purchased from Sino Biological (Wayne, Beijing, china).
To construct the DKK1 knockdown cells, SaOS2 cells were cultured in RPMI 1640 (Hyclone) medium containing 10% Tet-System Approved FBS (Gibco) and 1% P/S. Cells were seeded in a 6 cm culture dish and transfected with shRNA vectors using Lipo3000 (Thermo Fisher) for 48 h. Transfected SaOS2 cells were selected with 1 µg/mL of puromycin (Sigma-Aldrich) and treated with doxycycline (Sigma-Aldrich) to induce knockdown of DKK1.
The vector sequences for knockdown of DKK1 expression were as follows: Empty: tet-pLKO-puro (Addgene), shDKK1: tet-pLKO-puro with the targeting sequence 5'-CCGG-AATGGTCTGGTACTTATTCCC-CTCGAG-GGGAATAAGTACCAGACCATT- TTTTTG-3'. Vectors were cloned by Cosmogenetech (Seoul).
Assessment of osteogenic differentiation
Maturation of the extracellular matrix (early stage of differentiation) was evaluated by alkaline phosphatase (ALP) activity (Biovision, CA, USA) and staining (Sigma-Aldrich) and Sirius Red (Abcam, Cambridge, UK) staining. Matrix mineralization (late stage of differentiation) was evaluated by Alizarin Red (ARS, Sigma-Aldrich, MO, USA), hydroxyapatite (HA, Lonza, Basel-stadt, Swiss), and Von Kossa (VON, Sigma-Aldrich) staining, as described in our previous study [22, 23]. For quantification by ARS staining, stained wells were eluted with 200 µL of acetic acid at 37 ℃ for 2 h. The eluate solution was loaded in each well of a 96-well plate and measured at a wavelength of 450 nm with an ELISA plate reader. For VON quantification, captured images were analyzed with Image J. For HA quantification, stained wells were detected at an excitation wavelength of 492 nm and an emission wavelength of 550 nm using an ELISA plate reader.
Western blotting and mRNA analysis
Harvested cells were washed with PBS and lysed with 1X RIPA buffer containing phosphatase inhibitors and proteinase as supplements. The lysates underwent lysis in ice for 15 min and were centrifuged at 12,000g for 15 min at 4 ℃. Then the proteins in the lysates were quantified by a Bradford assay (Bio-Rad Laboratories, CA, USA), separated by SDSPAGE, and transferred onto nitrocellulose membranes (Cytiva, MA, USA). The membranes were blocked with 5% skim milk, immunoblotted with primary and secondary antibodies, and detected with ECL detection kits (Thermo Fisher). The total RNA was extracted with Nucleozol (Macherey-Nagel, PA, USA) reagent. At least 0.2 µg of the total RNA was used for reverse transcription. RT-qPCR was performed on a CFX96 Real-Time PCR detection system (Bio-Rad Laboratories) with SYBR Green Supermix (170-8882AP, Bio-Rad). The expression of each target gene was normalized to that of GAPDH. Normalized expression values were averaged, and then average fold changes were calculated. Antibodies used for western blotting and primers used for RT-qPCR are presented in Tables 1 and 2, respectively.
Table 1
Antibodies used for western blotting
Antibody | Company | Cat. No. |
DKK1 | Santa-cruz | sc-374573 |
OCN | Santa-cruz | sc-365797 |
Active β-catenin | Cell signaling | 19807 |
β-catenin | Cell signaling | 9562 |
p-CAMK2A | Abclonal | AP0255 |
CAMK2A | Abclonal | A17916 |
p-CREB1 | Abclonal | AP0019 |
CREB1 | Abclonal | A10826 |
HSP90 | BD Biosciences | 610418 |
Lamin B1 | abcam | Ab65986 |
GAPDH | Cell signaling | 2118 |
Table 2
Primer | Sequences |
DKK1 | F - CACACCAAAGGACAAGAAGG |
R - CAAGACAGACCTTCTCCACA |
OCN | F - AGCCACCGAGACACCATGAGA |
R - CTCCTGAAAGCCGATGTGGTC |
Runx2 | F - GTGGCCTTCAAGGTGGTAG |
R - ACTCTTGCCTCGTCCACTC |
GAPDH | F - CAAGATCATCAGCAATGCC |
R - CTGTGGTCATGAGTCCTTCC |
GAPDH | F – GTCAGTGGTGGACCTGACCT |
R - AGGGGTCTACATGGCAACTG |
Immunofluorescence (IF)
The cells were washed with PBS and fixed using 10% formalin for 15 min. Then, the cells underwent permeabilization with PBS containing 0.1% Triton X-100 (Sigma-Aldrich) and 1% BSA (Rocky Mountain Biologicals, Inc, MT, USA) for 1 h, followed by incubation with primary antibody overnight at 4 ℃. These cells were washed twice with PBS and incubated with Cy3 or Alexa 488-conjugated secondary antibody for 1 h at room temperature. The stained cells were washed with distilled water and mounted with DAPI (Vector CA, USA). Images were obtained using a confocal microscope (Leica Microsystems). The antibodies used for IF are presented in Table 3.
Table 3
Antibody | Company | Cat. No. |
DKK1 | Santa | sc-374573 |
OCN | Santa | sc-365797 |
p-CREB | Abclonal | AP0019 |
Alexa-488 | ThermoFisher | A11001 |
Cy3 | Jackson ImmunoResearch | 111-165-003 |
Transfection and luciferase assay
All transfection experiments were performed with Lipo3000 (Thermo Fisher) according to the manufacturer’s protocol. For the luciferase assay, human osteosarcoma cell line SaOS2 was co-transfected with each osteoblast-specific element (OSE) and osteocalcin (OCN) promoter (3 µg/well) and Renilla (0.3 µg/well). After transfection, the cells were reseeded and treated with DKK1 for 24 h in a dose-dependent manner. Cells were lysed and underwent a luciferase assay (Promega, WI, USA) according to the manufacturer′s protocol. Luciferase activity was measured with a Luminometer (Berthold), and the data were normalized to that of Renilla luciferase. SaOS2 cells were kindly donated by Dr. Heekyoung Chung (Hanyang University, Korea). OSE and OCN promoters were received from Dr. Kwang Yeol Lee (College of Pharmacy, Chonnam National University, Korea) [24]. For laboratory-scale production, the plasmid was transformed by Dh5a (Dongin Company, Korea) and subjected to Exfection™ Plasmid LE midi kit (GeneAll, Korea).
Ca+ influx assay
For assessment of Ca+ influx, cells were treated with DKK1 (PeproTech, NJ, USA) and verapamil (Ca+ channel blocker, Sigma-Aldrich) in a dose-dependent manner. The cells were analyzed with a Ca+ influx assay kit (Abcam) according to the manufacturer′s protocol.
Cytosolic and nucleus fractionation
Osteoprogenitor and SaOS2 cells were differentiated into mineralized osteoblasts. Cells were washed with PBS and centrifuged at 700g at 4°C to obtain a cell pellet. For the cytosolic fraction, cell pellets were lysed with cytoplasmic lysis buffer (0.2% Triton X-100, 200 mM Tris-HCl pH 8.0, supplemented with proteinase and phosphatase inhibitors) by gently pipetting. The lysates were placed on ice for 10 min and centrifuged at 700g for 10 min at 4 ℃, and then the supernatants were collected as cytosol proteins. The pellets were washed twice with cytoplasmic lysis buffer, and the supernatant was discarded. The pellets were lysed with nucleus lysis buffer (1% Triton X-100, 200 mM Tris-HCl pH 8.0, 400 mM NaCl, supplemented with proteinase and phosphatase inhibitors), placed on ice for 10 min, and centrifuged at 12,000g for 10 min at 4 ℃. The supernatant was collected as nucleus proteins. The proteins were analyzed with western blotting.
Trichloroacetic acid (TCA) precipitation
The method for TCA precipitation was previously reported [25]. Briefly, cells were seeded in a culture dish. The next day, the cells were transfected with DKK1 cDNA plasmid and empty plasmid using Lipo3000 for 2 days. After transfection, growth media was replaced with serum-free DMEM media for 1 day. To obtain the cell supernatants, the cultured media was collected and centrifuged at 700g for 10 min at 4 ℃, and then the supernatants were subjected to TCA precipitation.
Statistical analysis
All experiments in this study were performed more than 3 times. Graph Pad Prism version 7 (GraphPad, CA, USA) was used to analyze and visualize the data. All data were analyzed by analysis of variance, followed by an unpaired or paired t-test. Values are given as mean ± standard deviation.