Differentially expressed genes in AD.
We screened the GSE5281 dataset in the GEO database to look for unreported genes associated with AD. Differential expression analysis was performed on the data of gene expression profiles in six brain regions. A total of 2306 differentially expressed genes (DEGs) were identified in brain tissue samples from the AD and control groups, with 584 up-regulated genes and 1758 down-regulated genes (shown in Fig. 1a). There were no DEGs that were upregulated in the posterior cingulate or primary visual cortex.
The expression of SLC25A18 in multiple regions is positively correlated with AD.
The Venny 2.1.0 tool was used to intersect the up-regulated genes in EC, HIP, TeA, and SFG, yielding 67 up-regulated co-expression differential genes (shown in Fig. 1b). Then, one by one, we queried these genes on the GeneCards website to learn more about their molecular functions. SLC25A18, a multi-domain co-expressed DEG, was discovered to be an important glutamate transporter on the mitochondrial membrane. Mitochondrial dysfunction caused by disruptions in glutamate uptake, transport, and metabolism [9; 10] is important in neurodegenerative diseases such as AD [11]. SLC25A18 piqued our interest as a key glutamate translocator at the mitochondrial membrane.
The expression of SLC25A18 is elevated in the 5×FAD transgenic AD animal model.
Among the many theories about AD, the amyloid cascade hypothesis remains dominant, and Aβ accumulation is thought to be one of the primary factors leading to pathological changes [2]. We chose 5×FAD (familial Alzheimer's disease, FAD) transgenic mice as our model. A large amount of Aβ deposition began to appear in the brain of the transgenic mice when they were 4 to 5 months old, and the transgenic mice displayed spatial cognitive dysfunction [12]. As a result, 5×FAD transgenic mice can accurately mimic the pathological process in the AD brain.
We used RT-PCR to detect mRNA in brain tissue homogenates from 6-month-old WT mice and Tg-AD mice and discovered that SLC25A18 mRNA expression was increased in Tg-AD mice's brains (shown in Fig. 2a). We then stained mouse brain sections for Aβ and SLC25A18 with immunofluorescence and discovered Aβ deposition in the cortex and hippocampus of Tg-AD mice brains, as well as elevated expression of SLC25A18 in the same regions (shown in Fig. 2b). Based on the bioinformatics results, we looked at the EC, TeA, and HIP regions and discovered that SLC25A18 expression was higher in Tg-AD mice than in WT mice (shown in Fig. 2c). SLC25A18's elevation in the CA region was primarily in the CA3 region.
The expression of SLC25A18 is elevated in the chemically induced animal model.
AlCl3 and D-gal can cause pathological changes in mice that mimic AD, such as cognitive impairment, oxidative stress, decreased immune response, and changes in gene transcription [13–15]. As a result, chemical induction has become one of the modelling methods for studying AD mechanisms and drug screening.
Behavioural testing was performed on AlCl3 plus D-gal-induced AD model mice. The test results showed that the Model group mice spent significantly more time in the target position than the Control group mice (shown in Fig. 3a), indicating that the modelling was successful. Following that, immunofluorescence staining was performed on brain sections from both groups of mice. The expression of SLC25A18 was found to be higher in the EC, TeA, and CA3 regions of the brains of the Model group mice than in the Control group mice (shown in Fig. 3b).
The expression of SLC25A18 is elevated in the natural ageing animal model.
Ageing is one of the primary causes of AD, and the natural ageing animal model is a model that simulates age-related cognitive dysfunction and pathological changes in AD. In this study, wild-type mice were reared to the age of 24 months to create an animal model of ageing [16].
We stained brain sections of 6-month-old and 24-month-old WT mice with Aβ immunofluorescence and discovered that the 24-month-old mice had already developed Aβ pathological deposition (shown in Fig. 4a). This demonstrates that the model was successfully constructed. The brain sections of the two groups of mice were then immunofluorescently stained for SLC25A18. In aged mice, the expression of SLC25A18 was found to be increased in EC, TeA, and CA3 (shown in Fig. 4b).
The expression of SLC25A18 is elevated in the Aβ1-42-induced Neuro 2A cells model.
Increased extracellular glutamate levels and NMDA receptor activation have been linked to cognitive deficits and neuronal loss in the brains of AD patients [17; 18]. As a result, we used Aβ1–42 to induce neurons and a small amount of L-Glu to the culture medium to simulate excitatory neurotoxicity caused by NMDA receptor activation in postsynaptic neurons.
N2a cells were cultured in DMEM containing various glutamate concentrations, and it was discovered that L-Glu did not affect N2a cell viability at concentrations less than 2 mmol/L. (shown in Fig. 5a). Following that, we added various concentrations of Aβ1–42 to DMEM (containing very low concentrations of L-Glu). N2a cells were incubated in such media, and cell viability assays were performed to determine the degree of cytotoxicity of A1-42 to N2a cells (shown in Fig. 5b). We discovered a significant difference in cell viability when the concentration of Aβ1–42 reached 10 mmol/L. Finally, 10 mmol/L Aβ1–42 was used to induce N2a cells, and the induced cells were detected using Western Blot. SLC25A18 expression was found to be higher in the Model group shown in Fig. 5c).