Patients
From June 2002 to December 2012, 81 patients underwent radical curative resection for pancreatic cancer at Gangnam Severance Hospital, Yonsei University College of Medicine, Seoul, Korea. Among these patients, three were excluded due to poorly preserved tissue samples, incomplete clinicopathologic data, or loss to follow-up. Hence, 81 patients were retrospectively reviewed. Patients were followed every 3 months during the first 12 months, and then every 6 months after the first year. The study protocol was approved by the Institutional Review Board at Gangnam Severance Hospital, Yonsei University of Korea (3-2014-0153) and Institutional Animal Care and Use Committee (2019-0104) and complied with the Declaration of Helsinki. Informed consent was obtained from all participants.
Cell culture
MIA PaCa-2, PANC-1, BxPC-3, and AsPC-1 cells were obtained from American Type Culture Collection (ATCC) and cultured according to the ATCC guidelines. Cells were cultured in DMEM or RPMI (Biowest) supplemented with 10% fetal bovine serum (Biowest) and 1% antibiotic-anti mycotic (Gibco). Cells were incubated in a humidified atmosphere with 5% CO2 at 37℃.
siRNA interference
For gene knockdown, the following small interfering RNAs (siRNA) were purchased from Bioneer (Daejeon, KR). siLOXL2 (Bioneer, Cat.No 4017-1, sense : 5’-AGAUUCCGGAAAGCGUACA-3’/ antisense 5’-UGUACGCUUUCCGGAAUCU-3’)
si N-WASP (Bioneer, Cat.No 8976-1, sense: 5’-GUGCAUUAAUGGAAGUGAU-3’, antisense: 5’-AUCACUUCCAUUAAUGCAC-3’). Transfection was conducted using Lipofectamine RNAiMAX (Invitrogen) according to the manufacturers’ instructions. Cells were harvested and processed 48–72 h post-transfection.
Antibodies and western blot
To prepare the lysates, frozen pancreatic cancer tissues and cells were washed with ice-cold phosphate buffer solution (PBS) and lysed in RIPA lysis buffer. Protein was separated by SDS-PAGE and transferred on nitrocellulose membranes, blocked in 5% skim milk, and incubated with respective primary antibodies (1:1000 dilution). Anti N-WASP, phospho-N-WASP, LOXL2 (Abcam), anti-vimentin and anti-snail (Cell Signaling), N-cadherin, E-cadherin (BD Bioscience), β-actin (Santa Cruz Biotechnology), and γ-tubulin (Sigma-Aldrich) were used. The membranes were washed twice with Tris-buffered saline and Tween 20 (TBST), followed by incubation with HRP-conjugated secondary antibody (1:7,000 dilution, Cell Signaling Technology) in TBST with 3% skim milk. Bound antibody was probed using the ECL solution (Bio-Rad). Chemiluminescent signals were captured using X-ray films (AGFA). All experiments were performed in triplicate.
RNA isolation and qPCR
Cells and tissues were collected, and RNA was isolated using TRIZOL Reagent® (Sigma-Aldrich) according to the manufacturer’s instructions. Of the total isolated RNA, 0.2 µg was analyzed by reverse transcriptase PCR using one-step RT-PCR kit (Intron, KR). The first-strand cDNA was synthesized with 1 µg of RNA as a template, using the RT-qPCR cDNA Synthesis Kit (Intron, KR), according to manufacturer’s instructions. RT-qPCR was performed using SYBR qPCR reaction mix (Applied Biosystems). The primer sequences used in this study are listed in Supplementary Table 1. The results are presented as a relative mRNA expression level calculated with the 2−ΔΔCT method, using Gapdh as a reference gene.
Migration and invasion assays
For scratch wound migration assay, transfected cells were plated at 1.2–1.4×104 on a 24-well plate. Wound scratches were made 24 h after plating. Images of migrated cells were taken every 24 h using a microscope. For invasion assays, 8-µm pore size wells in a Transwell system (Corning Inc.) were coated for 1 h with Matrigel (1:50, Corning) at room temperature. Transfected cells (2×104)were seeded on the apical side of the Transwell chamber (24-well insert) in serum-free media and growth media was added to the basal compartment. The cells were allowed to invade for 24 h. The remaining cells on the top of the chamber were gently scraped off using wetted cotton swabs. The cells that had invaded the basal side were fixed in methanol for 10 min, stained with 0.2% crystal violet, and then washed multiple times with 3’DW. The migration and invasion assays were performed in triplicate and repeated three times independently.
Immunocytochemistry
Transfected cells were fixed with 3.7% paraformaldehyde for 10 min and permeabilized with 0.1% Triton X-100 for 30 min. Cells were washed with PBS thrice and incubated with 1% bovine serum albumin for 1 h at room temperature. Cells were incubated with primary antibodies (LOXL2, N-WASP, ARP2, phalloidin iFlour-488; Abcam) overnight at 4℃ (1:100 to 1:1000), and then, the cells were incubated at room temperature with Alexa Fluor 488 or 555 conjugated secondary antibodies (1:1000). FluoroShield mounting medium with DAPI (Abcam) was used stain and mount cells for 5 min. Immunostained cells were observed under a Carl Zeiss LSM780 confocal microscope.
Invadopodia formation assay
FITC-gelatin invadopodia assays were performed as per the manufacturer’s procedure (QCM™ Gelatin Invadopodia Assay, Millipore). Briefly, 8-well chamber slides were coated with poly-L-lysine for 20 min at room temperature, washed with PBS, fixed with glutaraldehyde for 15 min, and washed with DPBS three times. After washing, a gelatin mixture (1:5=Fluorescein gelatin:unlabeled gelatin) was applied to each well and incubated at room temperature for 10 min. Substrates disinfected with 70% ethanol in sterile water were incubated at room temperature for 30 min and protected from light. To eliminate residual free aldehydes, growth media were added to each well, incubated at room temperature for 30 min, and protected from light. Cells were plated in wells at 20–80% confluence and incubated for 24 h. After incubation time, slides were fixed with 3.7% formaldehyde in DPBS for 30 min at room temperature. Blocking or permeabilization buffer for fluorescent staining was treated for 1 h at room temperature. Slides were incubated in TRITC-phalloidin and DAPI in fluorescent staining buffer for 1 h. The chamber was removed and the slide was covered with mounting media. Imaging of invadopodia and ECM degradation was performed using fluorescence confocal microscopy (Carl Zeiss 780).
Knockdown stable cell lines
Five different short hairpin ribonucleic acid (shRNA) N-WASP sequences in a lentiviral vector (pLKO.1-Puro) and controlled shRNA were purchased from Sigma-Aldrich. For the production of lentiviruses and transfection to HEK293 cells, Lipofectamine 3000 (Invitrogen) was used. PANC-1 cells were infected with the collected and purified viral particles; cells were stably selected and maintained with 2 μg/ml puromycin treatment. The shRNA sequence that sufficiently knocked down N-WASP expression was GCACAACTTAAAGACAGAGAA. (TRCN0000123061, Sigma-Aldrich)
Immunoprecipitation
To analyze protein binding, cell lysates were incubated with anti-FAK or anti-ARP2 antibodies overnight at 4℃, and immune complexes were pulled down with protein A/G magnetic beads (EMD Millipore, USA). The interacted proteins were eluted in a denaturing SDS sample buffer and loaded on SDS-PAGE and transferred to a membrane. The membrane was blocked and incubated with indicated primary antibodies and stained using the ECL solution.
Pancreatic cancer orthotopic model
All animal studies were conducted with an approved protocol proposal from the animal ethics committee of Yonsei University College of Medicine (approval #2019-0104). BALB/c nude mice (age, 6 weeks, female) were purchased from Orient Bio. The pancreas was surgically exposed through an abdominal excision under anesthesia with an intraperitoneal injection (i.p.) of Alfaxan (25 mg/kg). Human pancreatic cancer cells were inoculated directly into the pancreas of the mice using a 30 G needle (BD Biosciences). PANC-1 cells (1 × 106) were mixed with serum-free DMEM and Matrigel (1:1) and injected at a volume of 50 μl. To prevent cancer cells from leaking, the excision was closed after covering the injection site with the surge cell. After the operation, the mice were warmed and monitored until conscious and then placed in HEPA-filtered cages with feed and water. After 12 weeks, the mice were sacrificed and examined for tumor spreading through macroscopic and microscopic observations using hematoxylin and eosin (H&E) staining. The pancreas, spleen, liver, and lung were examined using the H&E section.
Immunohistochemical (IHC) staining
Serial sections (5 µm) of each block were adhered to poly-L-lysine-covered slides and incubated at 62 ˚C for 60 min. After deparaffinization and rehydration, the sections were heated in a 10-mM citrate buffer (pH 6.0) for 15 min and stained with an antibody. Normal pancreas tissue within the block was used as positive controls. IHC staining was categorized as negative, “1+”, “2+”, or “3+” in high-power fields (200×) according to the staining intensity. Positivity was assigned for the scores “2+” and “3+”. The staining intensity was assessed by two pathologists who were blind to the clinical outcomes.
Statistical methods
For the statistical analysis, the unpaired t-test and ANOVA were performed. The differences were considered statistically significant at p < 0.05—*; p ≤ 0.01—**. The tests were performed using GraphPad Prism version 8.01 (GraphPad Software).