3.1 Chemicals
BM-1197 was kindly provided by Professor Yang Dajun.BEZ235 and ABT-263 were purchased from Selleckchem (Houston, TX). Gemcitabine hydrochloride was purchased from Jiangsu Haosen Company and Doxorubicin hydrochloride was purchased from Pharmacia Co., Ltd. Vinblastine sulfate was purchased from Shenzhen Wanle Pharmaceutical Co., Ltd. For in vitro assays, all compounds were dissolved in dimethylsulfoxide (DMSO; Sigma Aldrich, MO, USA) at a stock concentration of 40 mM and stored at -20 ℃. The final concentration of DMSO to dilute compound in culture media did not exceed 0.1%.
3.2 Cell lines and cell culture
The cell lines used in this study include OCI-ly1, OCI-ly8, OCI-ly19, Su-DHL-4 and Nu-DHL-1 cells, which are from diffuse large B cell lymphoma. Raji, Ramos and Namalwa cells are from Burkitt lymphoma. Jurkat cells are from human peripheral blood leukemia T cells. All cells were cultured at 37℃ with 5% CO2. OCI-ly1, OCI-ly8, OCI-ly19,Raji,Ramos,and Namalwa cells were cultured in RPMI-1640 medium containing 10% fetal bovine serum, while Su-DHL-4 and Nu-DHL-1 cells were cultured in RPMI-1640 medium containing 20% fetal bovine serum. All culture media contained 100 IU/ml penicillin and 100 mg/ml streptomycin. All experiments were performed in the logarithmic growth phase of the cells.
3.3 Cell viability assay
Cell viability was determined by a CCK-8 kit. Lymphoma cells at the logarithmic growth phase were inoculated into 96-well culture plates with 180 μl of medium (cell concentration: 5000/well). After incubation for 24 h, 20 μl of BM-1197 at different concentration was added. After incubation for 72 h, 10 μl of CCK-8 was added to each well and incubated for 3-4 h. OD values were measured at 450 nm using a microplate reader. All experiments were performed in triplicate.
The combination effect of BM-1197 and other chemotherapy drugs were determined by combined index value (CI value). After OCI-ly8 cells incubation for 24 h, BM-1197 was combined with Adriamycin, Gemcitabine and Vincristine at indicated ratio and concentration. After incubation for 68 h, 10 μl of CCK-8 was added to each well and incubated for another 3-4 h. The OD value was read at 450 nm using a microplate reader. The inhibition rate was calculated according to the above formula. CompuSyn software (Chou-Talalay formula) was used to calculate the combined index value (CI value). A CI value less than 0.1 indicated a strong synergistic effect of two drugs; a CI value less than 0.9 indicated a synergistic effect of two drugs; a CI value greater than 0.9 and less than 1.1 indicated a weak synergistic effect; and a CI values greater than 1.1 indicated an antagonistic effect of two drugs.
3.4 Hoechst 33258 staining for the detection of apoptotic morphological changes
OCI-ly8 cells were treated with BM-1197 at different concentrations (0, 0.5, 1.0, 2.0 μM) for 24 h. The cells were collected and fixed with 0.5 ml of fixative at 4℃ overnight. After fixation, cells were washed twice with PBS, each for 3 min. Cells were fixed on a glass slide, and 0.5 ml of Hoechst 33258 staining solution was added for 5 min. After washing in PBS, anti- quenching solution was added, followed by cover slipping. Blue nuclear staining was observed under a fluorescence microscope with an excitation wavelength of approximately 350 nm and an, emission wavelength of approximately 460 nm.
3.5 Annexin V / PI double staining for the detection of early apoptosis
OCI-ly8 cells in the logarithmic growth phase were inoculated in 6-well plates at 3 × 105 per well and incubated for 2-4 h. After treatment with BM-1197 at different concentrations (0, 0.5, 1.0, 2.0 μM) for 24 h, the cells were collected. Cells were washed with PBS twice, and 20 μl of Annexin-Ⅴ and PI staining solution was added. Cells were incubated for 15 min at room temperature in the dark. Stained cells were analyzed within 1 h with a flow cytometer. The negative control group was divided into three groups with binding buffer: one was treated with Annexin Ⅴ, another was single-stained for PI, and the third was used as a standard sample for flow cytometry.
3.6 Detection of Caspase-3/ Caspase-9activity
The activity of caspase-3/caspase-9 was determined using a Caspase-3/caspase-9 activity kit (Beyotime Institute of Biotechnology, Haimen, China). After treatment with BM-1197, cell lysates were prepared by incubating 2 × 106 cells/ml in extraction buffer (25 mM Tris–HCl, pH 7.5, 20 mM MgCl2, 150 mM NaCl, 1% Triton X-100, 25 μg/ml leupeptin, and 25 μg/ml aprotinin) for 30 min on ice. Lysates were centrifuged at 12,000×g for 15 min, the supernatants were collected and protein concentrations were determined by the Bradford Protein Assay Kit (Beyotime Institute of Biotechnology, Haimen, China). Cellular extracts (30 μg) were then incubated in a 96-well plate with 20 ng of Ac-DEVD-pNA/Ac-LEHD-pNA for 2 h at 37 °C. Caspase-3 and caspase-9 activities were measured by cleavage of the Ac-DEVD-pNA and Ac-LEHD-pNA substrates, respectively, to pNA, the absorbance of which was measured at 405 nm. Relative caspase activity was calculated as a ratio of the emission of treated cells to untreated cells.
3.7 Western Blot Analysis
OCI-ly8 cells were treated with different concentrations of BM-1197 (0, 0.25, 0.5, 1, 2 μM) for 24 h or with 2 μM BM-1197 for 0, 1, 3, 6, 12 and 24 h. After that, cells were collected and washed twice with cold PBS and lysed in 1 × cell lysis buffer, which was diluted from 10 × cell lysis buffer (Cell Signaling Technology). Then, 1x proteinase inhibitor cocktail was added in the lysis buffer. Lysates were centrifuged at 12000 g at 4 °C for 20 min. Supernatants were collected and stored at -80℃ until used. The protein concentration of the supernatants was determined using BCA protein assay reagents. The relevant primary antibodies used included: Bcl-2, Bax (6A7) and PARP-1 polyclonal antibodies purchased from Santa Cruz Biotechnology, Inc. (Santa Cruz, CA), and anti-Mcl-1, PUMA, Bcl-xl, caspase 3, Caspase 9, cytochrome c (cyt c), and GAPDH monoclonal antibody purchased from Cell Signaling Technology (Danvers, MA). The COXⅣ polyclonal antibody was purchased from Biyun Tian Biotechnology Research Institute. Mouse and rabbit secondary antibodies were from Cell Signaling Technology (Danvers, MA). Antigen-antibody complexes were detected using the PhototopeTM-HRP Chemiluminescent Substrate System (Cell Signaling Technology) per the manufacturer’s instructions.
3.8 Mitochondrial cytochrome c release assay
OCI-ly8 cells were treated with different concentrations of BM-1197 (0, 0.25, 0.5, 1, 2 μM) for 24 h or with 2 μM BM-1197 for 0, 1, 3, 6, 12 and 24 h. After that, cells were collected and washed twice with cold PBS and lysed in 1 × cell lysis buffer, which was diluted from 10 × cell lysis buffer (Cell Signaling Technology). Then, 1x proteinase inhibitor cocktail was added in the lysis buffer. Lysates were centrifuged at 12000 g at 4 °C for 20 min. Supernatants were collected and stored at -80℃ until used. The protein concentration of the supernatants was determined using BCA protein assay reagents. The relevant primary antibodies used included: Bcl-2, Bax (6A7) and PARP-1 polyclonal antibodies purchased from Santa Cruz Biotechnology, Inc. (Santa Cruz, CA), and anti-Mcl-1, PUMA, Bcl-xl, caspase 3, Caspase 9, cytochrome c (cyt c), and GAPDH monoclonal antibody purchased from Cell Signaling Technology (Danvers, MA). The COXⅣ polyclonal antibody was purchased from Biyun Tian Biotechnology Research Institute. Mouse and rabbit secondary antibodies were from Cell Signaling Technology (Danvers, MA). Antigen-antibody complexes were detected using the PhototopeTM-HRP Chemiluminescent Substrate System (Cell Signaling Technology) per the manufacturer’s instructions.
3.9 Immunoprecipitation
OCI-ly8 cells were incubated with 2 μM BM-1197 or 0.1% DMSO for 6 h. The cells (1×107) were then harvested and lysed in 500 μl of CHAPS lysis buffer (50 mM Tris-Cl [pH 7.4], 150 mM NaCl, 1% CHAPS, 1 mM EDTA, 1 mM EGTA, protease inhibitors, PhosSTOP [Roche], and 20 mM MG132) on ice for 30 min. Whole cell lysates were obtained, precleared with protein A/G-Sepharose, and incubated overnight with 1 μg of a specific antibody (Bak, Bax, Bcl-2, Bcl-xl, PUMA, Bim) at 4℃. Immunocomplexes were captured with either protein A-Sepharose or protein G-Agarose. The beads were pelleted, washed 3 times, and boiled in SDS sample buffer. The presence of immunocomplexes was determined by western blot analysis.
3.10 Gene knockdown using siRNA
The siRNAs to Mcl-1 or control siRNA were all purchased from GenePharma (Shanghai). OCI-Ly8 cells were transfected with siRNA using Lipofectamine 2000 (Invitrogen) according to the manufacturer’s instructions. Cells were incubated for 8 h, and then the culture medium was refreshed for further treatment.
3.11 In vivo xenograft studies
In the xenograft cancer model, male nonobese diabetic severe combined immunodeficiency (NOD/SCID) mice were purchased from Charles River (Beijing, China), housed in groups of five and given three days to acclimate to the housing facility. Each of the mice was approximately 4 weeks with a body weight of approximately 18 g before the cancer cells were implanted. The mice were fed under constant temperature (21℃ ±2℃) and humidity (55% ±10%) in specific pathogen free (SPF) rooms in Sun Yat-sen University laboratory animal center with a 12:12 light:dark cycle with lights on at 07:00 and off at 19:00. During housing, animals were monitored twice daily for health status. No adverse events were observed. All the materials were autoclave-sterilized before contacting the mice.
OCI-Ly8 cells were implanted subcutaneously in the right side of axillary with 1×107 tumor cells suspended in a 200-μl volume of PBS. For drug efficacy studies, when the mean tumor volume reached approximately 100~200 mm3, mice were randomized into the vehicle control group (1% Klucel LF/0.1% Tween 80) or BM-1197 treatment group (10 mg/kg; QOD), with five mice per group. The randomization was performed with a randomized table. Tail intravenous injection was performed in both groups. Tumor sizes were measured by caliper equipment, and animal body weights were recorded 2~3 times per week. Tumor volume (mm3) =1/2 × (length×width2). The mice were killed by the cervical dislocation method. All animal experiments were carried out under the guide of the Sun Yat-sen University Committee for the Use and Care of Laboratory Animals and approved by the animal experimentation ethics committee.
3.12 Statistical analysis
All experiments were performed at least three times. Statistical analysis was carried out using Microsoft Excel 2001, and data are presented as the mean± standard error of the mean (SEM) combining three experimental repeats. P<0.05 was considered a significant difference.