1. Study sites, sample collections and mosquito handling
Adults and immature stages of Ae. albopictus were collected during the summer of 2017, 2018 and 2019, in a total of 19 urban and peri-urban localities in Greece, in the regions of Thessaloniki [32] and Rodopi (Northern Greece), Attica and Argolida (Central Greece), the Island of Chios (North Eastern Aegean Islands complex) [32], Patra and Kalamata (Western Greece), the Island of Kefalonia (Ionian Islands complex) and Crete (Chania, Rethymno and Heraklion-Southern Greece) (Table 1).
Adult specimens were collected with aspiration catches and CDC-light traps baited with dry ice. Larvae were sampled with dipping collections and eggs were collected with oviposition traps (black plastic cup with 2 wooden tongue depressors as ovipositional substrate). Both larvae and eggs were collected from at least five different sites within each locality in order to minimize the probability of including isofemale mosquitoes in the molecular analyses.
Following ovitrap collections, eggs were reared to adults in standard insectary conditions (temperature 27± 2oC and relative humidity 70-80%), identified morphologically to species [33] and stored in ethanol at -4oC for the subsequent molecular analysis. A subgroup of eggs from Aghios Stefanos (region of Attica), Kefalonia, Patras and Heraklion were reared to larvae or adults to use for susceptibility bioassays, as described below.
2. Genomic DNA extraction and molecular identification of mosquito species
Genomic DNA (gDNA) was extracted from individual larvae or adult mosquitoes and from pools of eggs (10 eggs per pool per locality; 3 localities), using DNazol reagent according to manufacturer’s instructions (Invitrogen, Carlsbad, CA).
Species identification was based on the PCR amplification (KAPA Taq PCR Kit) of the nuclear ribosomal spacer gene ITS2 [34] (primers 5.8S, 28S; Additional file 1: Table S1), following an assay that discriminates between Ae. albopictus, Ae. cretinus and Ae. aegypti, by generating PCR products of 509 bp, 385 bp and 324 bp in length, respectively. The applied thermal protocol was the following: initial denaturation at 94oC for 10 min, 40 cycles x [denaturation at 94oC for 1 min, primer annealing at 52oC for 1 min, primer extension at 72oC for 1 min] and final extension at 72oC for 10 min. The PCR products were electrophoresed on a 1.5% w/v agarose gel containing ethidium bromide.
3. Insecticide susceptibility bioassays
a) Larval bioassays
Following the WHO guidelines for laboratory and field testing of mosquito larvicides [35], we examined the susceptibility of Ae. albopictus populations to two larvicides; the bacterial larvicide Bti (VectoBac 1200 ITU (International Toxin Units)/ mg; 11,61% w/v) and the insect growth regulator DFB (DU-DIM 15SC; 15% w/v). Both insecticides were diluted in distilled water. Bioassays were performed using Ae. albopictus third-early fourth instar larvae (F0-F1 generation), reared under standard insectary conditions (temperature 27±2oC and relative humidity 70-80%). Fifteen to twenty larvae were placed in 99 ml water, to which 1 ml of the insecticide solution was added. A range of five to nine concentrations was tested for each insecticide (Bti: 0,008 - 0 ,50 mg/L; DFB: 0,0004 – 0,02 mg/L) in order to define a mortality range between 10 and 95% and determine the LC50 and LC95 values. At least three replicates were prepared for each concentration. Larval mortality was recorded after the WHO recommended exposure time for each insecticide. Moribund larvae were counted as dead [35]. Results were compared to the LC50 and LC95 values reported for susceptible-laboratory Ae. albopictus strains reported in other studies [36, 37, 38].
b) Adult bioassays
Three to five days old, non-blood fed female mosquitoes were subjected to insecticide susceptibility tests against deltamethrin and malathion, following the CDC Bottle Bioassay Guidelines [39]. A standard Ae. albopictus susceptible laboratory strain was included [40]. Insecticide stock solutions in acetone were prepared and Wheaton bottles were cleaned and coated as described in the CDC guidelines. The diagnostic dose of the insecticide under evaluation was used: Deltamethrin 10 ug/bottle and Malathion 50 ug/bottle. Tests were performed using 20-25 mosquitoes per bottle. Four insecticide treated replicate bottles and at least one control bottle (coated with acetone only) were used in each experiment set. The diagnostic time for both insecticides tested is 30 minutes [39]. Alive and dead mosquitoes in each bottle were recorded at time intervals of 5-15 minutes. Mortality rate at the diagnostic time was calculated to determine the insecticide susceptibility status, according to CDC recommendations.
4. Genotyping of target site resistance mutations
a) Detection of knock-down resistance (kdr) mutations in the VGSC gene
The VGSC domain I was investigated for the presence of the V1016G mutation and domain III for mutations I1532T and F1534L/S/C via PCR and product sequencing.
The PCR (KAPA Taq PCR Kit) for domain II was carried out in 25 ul containing: 1.5 ul of mixed gDNA extracted from 5-8 Ae. albopictus individuals of the same locality, 10X DNA polymerase Buffer, 0.4 uM of each primer (primers kdr2F, kdr2R; Additional file 1: Table S1), 0.4 uM of dNTPs and 1.5 U of Taq polymerase. The PCR thermal conditions were: initial denaturation at 95oC for 3 min, 40 cycles x [denaturation at 94oC for 30 sec, primer annealing at 55oC for 30 sec, primer extension at 72oC for 1 min] and final extension at 72oC for 5 min. A small amount of the PCR products (5 ul) was electrophoresed on a 1% w/v agarose gel to verify the presence of the correct size amplicon (500bp), and the remaining amount was purified using the Nucleospin PCR & Gel Clean-Up Kit and sequenced using primer kdr2F.
The PCR for domain III was carried out in 25 ul containing: 1.5 ul of gDNA from Ae. albopictus individuals, 10X DNA polymerase Buffer, 2 mM MgCl2, 0.3 uM of each primer (primers kdr3F, kdr3R; Additional file 1: Table S1), 0.4 uM of dNTPs and 1.5 U of Taq polymerase. The thermal conditions of the PCR were: initial denaturation at 95oC for 3 min, 40 cycles x [denaturation at 94oC for 30 sec, primer annealing at 57oC for 30 sec, primer extension at 72oC for 1 min] and final extension at 72oC for 5 min. The products were electrophoresed on a 1% w/v agarose gel and the specific 740 bp band was gel extracted and purified using the Nucleospin PCR & Gel Clean-Up Kit and sequenced with primer kdr3Rin.
b) Analysis of the CHS locus 1043
Analysis of the CHS1 locus I1043, to identify possible conserved DFB resistance mutations that have been found in other species [28, 30] was performed in pools of mixed gDNA extracted from 5 to 8 Ae. albopictus individuals of the same locality. Available Ae. albopictus DNA samples from other countries [27] were included in the analysis and genotyped individually. A 350bp fragment of the Ae. albopictus chitin synthase gene, spanning the locus 1043 (numbering based on Musca domestica genomic sequence) was amplified in a 25 ul PCR (KAPA Taq PCR Kit) containing 1.5 ul DNA, 10X DNA polymerase Buffer, 0.4 uM of each primer (primers kkv F3, kkv R3; Additional file 1: Table S1), 0.4 uM of dNTPs and 1.5 U of Taq polymerase. The thermal conditions were: initial denaturation at 95oC for 5 min, 40 cycles x [denaturation at 94oC for 30 sec, primer annealing at 55oC for 30 sec, primer extension at 72oC for 1 min] and final extension at 72oC for 10 min. A small amount of the PCR products was electrophoresed on a 1.5% w/v agarose gel containing ethidium bromide to verify amplification. The remaining amount of the PCR products was purified using the Nucleospin PCR & Gel Clean-Up Kit (Macherey Nagel, Dueren, Germany) and sequenced using the kkv F3 primer.
5. Metabolic resistance: detection of esterase gene amplification
CCEae3a and CCEae6a gene copy numbers were determined using quantitative real-time PCR on individual Ae. albopictus specimens. Amplification reactions at a 10ul final volume were performed on a StepOnePlus Real-Time PCR System (Applied Biosystems) containing 0.5 ul of gDNA, 0.2 uM of each primer (CCEae3aF, CCEae3aR and CCEae6aR, CCEEae6aF; Grigoraki et al., 2017; Additional file 1: Table S1) and SYBR Select Master Mix (Applied Biosystems, Thermo Fischer Scientific). Histone 3 (NCBI: XM_019696438.1) was used as a reference gene for normalization (primers His3 TaqF, His3 TaqR; Additional file 1: Table S1). The thermal parameters were: 50oC for 2 min, 95oC for 2 min and 40 cycles x [95oC for 3 sec, 60oC for 30 sec]. Melting curves were performed for reference and target genes to verify the presence of a unique specific PCR product, which was also checked on a 1% w/v agarose gel. A no-template control was included to detect possible contamination. Two replicates per sample were included. CCEae3a and CCEae6a gene copy numbers were estimated relatively to a temephos susceptible Αe. albopictus lab-strain from Greece.