Primer ID
|
Primer sequences (5′–3′)
|
SNP
type
|
Size (bp)
|
SNP
position
|
PIC
|
Ho
|
He
|
PHWE
|
TpSNP 1
|
F: ACGTTGGATGCACAAAGACTGATATTCGCC
R: ACGTTGGATGTCTGCATAGCTGAAAGGGTG
EXT: caTGAAAGGGTGCATTTTGAT
|
T/A
|
104
|
54
|
0.2278
|
0.1724
|
0.2622
|
0.0652
|
TpSNP 2
|
F:ACGTTGGATGTCTGACGCATGTTTCATCCG
R: ACGTTGGATGTTGGCCCATTCTCATTACCC
EXT: ccacCTTTCGCTTTCAAAGCTCTGA
|
A/C
|
99
|
49
|
0.2278
|
0.1724
|
0.2622
|
0.0652
|
TpSNP 3
|
F: ACGTTGGATGTCTTAGAATGGTGTAATCCC
R: ACGTTGGATGCCAGTCTCTAGTTCAGTTGG
EXT: CAGTTGGTACAGATGAGT
|
G/T
|
110
|
56
|
0.3747
|
0.3448
|
0.4994
|
0.0956
|
TpSNP 4
|
F: ACGTTGGATGTGGATAAAGGTGCCAACTGC
R: ACGTTGGATGTATTCTTTTGTCCCACCCTG
EXT: AGGTGTGGCAGTGGA
|
A/T
|
92
|
55
|
0.2447
|
0.2069
|
0.2854
|
0.1386
|
TpSNP 5
|
F: ACGTTGGATGAAGTCAGCTCCTCTCATGTG
R: ACGTTGGATGAAGTGCAAACGAAGCGGAAG
EXT: ggacCGAAGCGGAAGGTTTATAAAGGG
|
A/G
|
96
|
45
|
0.2447
|
0.3448
|
0.2854
|
0.2619
|
TpSNP 6
|
F: ACGTTGGATGCATTCGTCACTAGCTATGTC
R: ACGTTGGATGTATTTCGGTGTCGGCATGTC
EXT: ggtTGAAGATCTGGAATTCTACTATTTA
|
T/C
|
106
|
61
|
0.2278
|
0.3103
|
0.2622
|
0.3226
|
TpSNP 7
|
F: ACGTTGGATGACGCATTCCGCCAATCAGG
R: ACGTTGGATGTCCTTCAATTCCCCTTCCTC
EXT: CCTTCCTCCACATCTAC
|
C/G
|
93
|
77
|
0.2278
|
0.3103
|
0.2622
|
0.3226
|
TpSNP 8
|
F: ACGTTGGATGTGACCTCTCTCTAAAAAGTC
R: ACGTTGGATGCCATTCAATTAGAAAGCGTC
EXT: cccacTTAGAAAGCGTCAATCTGAAC
|
T/C
|
101
|
57
|
0.3738
|
0.5862
|
0.4976
|
0.3377
|
TpSNP 9
|
F: ACGTTGGATGAGTGATCAAATTACCGCTG
R: ACGTTGGATGGCCAAGTTGCAGGTAGATAG
EXT: cACAAATGCTTCTTTACAAAAGGA
|
G/A
|
107
|
46
|
0.2095
|
0.2759
|
0.2378
|
0.3889
|
TpSNP 10
|
F: ACGTTGGATGTAGCTGGATACTTTCCGGAC
R: ACGTTGGATGAGTAACTGCCCACTCATTCG
EXT: aactGGTAGACATGTCATGGAGC
|
T/C
|
111
|
41
|
0.2095
|
0.2759
|
0.2378
|
0.3889
|
TpSNP 11
|
F: ACGTTGGATGGCGGTCATGGTATTGTTTAG
R: ACGTTGGATGTCCCCCTCTCTAATAACTCC
EXT: ccctgACGAAAATAACGACGACCATTGA
|
G/A
|
112
|
73
|
0.2743
|
0.2759
|
0.3282
|
0.3906
|
TpSNP 12
|
F: ACGTTGGATGCAAACTAGCCAGACAATGGG
R: ACGTTGGATGGTAAAAAGAAGAAATCACAC
EXT: TCACACAATATATATGACACTATCTCTT
|
C/T
|
102
|
65
|
0.2743
|
0.2759
|
0.3282
|
0.3906
|
TpSNP 13
|
F: ACGTTGGATGTGACATGTACCAACAGGAGG
R: ACGTTGGATGTTTGCCATCACTGGTGATAG
EXT: AGCGGAGATCCCATAG
|
G/A
|
83
|
59
|
0.1897
|
0.2414
|
0.2123
|
0.4598
|
TpSNP 14
|
F: ACGTTGGATGGAGCTGGTTAGGAAATTTTGC
R: ACGTTGGATGGGAATCTTGGACTACATGAG
EXT: tGACTACATGAGAATACCAAG
|
T/G
|
117
|
52
|
0.3364
|
0.4828
|
0.4281
|
0.4914
|
TpSNP 15
|
F: ACGTTGGATGCGAGATTTAGCCTGAAAAG
R: ACGTTGGATGCTGTTTCACATGTCAACGTC
EXT: attaACATGTCAACGTCTTCATAC
|
T/C
|
91
|
44
|
0.3364
|
0.4828
|
0.4281
|
0.4914
|
TpSNP 16
|
F: ACGTTGGATGCTTTGTGAGCATTTTCCTAG
R: ACGTTGGATGATGTGGCGACGTACATCAAC
EXT: CAACAGGAGGCAGAAT
|
G/T
|
98
|
78
|
0.1683
|
0.2069
|
0.1855
|
0.5344
|
TpSNP 17
|
F: ACGTTGGATGGCTATGCTGTCTAAAACCTC
R: ACGTTGGATGGGTTGAGAGAAAAATGTCAG
EXT: ttAGAGAAAAATGTCAGCTGGAT
|
G/A
|
116
|
46
|
0.3747
|
0.5517
|
0.4994
|
0.5727
|
TpSNP 18
|
F: ACGTTGGATGGGAAAGGGAGAATGGGAGTG
R: ACGTTGGATGAGAGACATTGCAAGCACTCC
EXT: CTCCCCTCCCTCATT
|
G/T
|
91
|
68
|
0.1451
|
0.1724
|
0.1576
|
0.6114
|
TpSNP 19
|
F: ACGTTGGATGCTGTCCGACATGAAATTGCC
R: ACGTTGGATGAACTCCATTTTCTGCTTTG
EXT: tgcACTCCATTTTCTGCTTTGGAATTTG
|
T/C
|
89
|
54
|
0.1451
|
0.1724
|
0.1576
|
0.6114
|
TpSNP 20
|
F: ACGTTGGATGCGAAAATATTAGTCTGAATATG
R: ACGTTGGATGTGTGGAGAAATGACAAGGCG
EXT: ttggaGGAGACCAAAGTGGAAGGAAAT
|
T/C
|
102
|
41
|
0.2873
|
0.3793
|
0.3478
|
0.6256
|
TpSNP 21
|
F: ACGTTGGATGCAGTTGTACTAACTGTACGC
R: ACGTTGGATGATTTTCCACGAGTCAGTCAG
EXT: ggGAGTCAGTCAGGAAAGT
|
C/A
|
92
|
65
|
0.2873
|
0.3793
|
0.3478
|
0.6256
|
TpSNP 22
|
F: ACGTTGGATGCTGACAGACTTGTTTCTCTTG
R: ACGTTGGATGTAGTGACGAAAAGACAAAGG
EXT: ggaggAAAGACAAAGGCAGCAA
|
G/A
|
95
|
76
|
0.3702
|
0.4483
|
0.4905
|
0.6430
|
TpSNP 23
|
F: ACGTTGGATGTCACGAACAACTTTGAAAGC
R: ACGTTGGATGTCGACGCTTAGATCTGTAAC
EXT: aacacACTAGTAACGAAAACTGTTTATA
|
C/T
|
98
|
50
|
0.3285
|
0.3793
|
0.4144
|
0.6485
|
TpSNP 24
|
F: ACGTTGGATGTATTCTCCTGATGAGTCGTG
R: ACGTTGGATGAATAAGGGATGCAGTCACCG
EXT: TCGCCTTCCATCCTA
|
T/A
|
99
|
53
|
0.2278
|
0.2414
|
0.2622
|
0.6691
|
TpSNP 25
|
F: ACGTTGGATGAGTGAGGCCAAGTTTCACAG
R: ACGTTGGATGTGCTGAACCCAAATGACTCG
EXT: gCCGGTTGGGTAGAGT
|
C/A
|
96
|
67
|
0.2278
|
0.2414
|
0.2622
|
0.6691
|
TpSNP 26
|
F: ACGTTGGATGGCCACAAGGTTGGGAACCAT
R: ACGTTGGATGCTGGAGTACTTGGATCCTTG
EXT: CCCATCTTTTGAAACCTG
|
A/G
|
91
|
45
|
0.1202
|
0.1379
|
0.1284
|
0.6900
|
TpSNP 27
|
F: ACGTTGGATGTAGCAAGAACAAAGCAGACC
R: ACGTTGGATGTCCTGAGAAACTTATGTGTC
EXT: CGTTGAATGACAACAAAACTG
|
T/C
|
103
|
67
|
0.1202
|
0.1379
|
0.1284
|
0.6900
|
TpSNP 28
|
F: ACGTTGGATGTATGACGTCCAATTTCGCTG
R: ACGTTGGATGACAACAGAAGGGTTCTTCTC
EXT: agCATTAGTGTTACTGGTATATAATTTG
|
G/A
|
100
|
68
|
0.1202
|
0.1379
|
0.1284
|
0.6900
|
TpSNP 29
|
F: ACGTTGGATGGTGTCCAGGCAATAAACGAG
R: ACGTTGGATGTTTGTGCTGCTGCGTATATC
EXT: CCGTGATTGAGTCCG
|
A/T
|
107
|
71
|
0.1202
|
0.1379
|
0.1284
|
0.6900
|
TpSNP 30
|
F: ACGTTGGATGTCTTTAGATTCCTGTATGC
R: ACGTTGGATGTCCAGCATCATAAACCTGAC
EXT: ATGAACCAATGGAATGTG
|
G/A
|
98
|
61
|
0.1202
|
0.1379
|
0.1284
|
0.6900
|
TpSNP 31
|
F: ACGTTGGATGGACATGCTCTGCTCTCCAAG
R: ACGTTGGATGGTGAGCTAATTTACGCCATC
EXT: accccTCACCTGAGATATTAGTGAT
|
T/C
|
99
|
42
|
0.1202
|
0.1379
|
0.1284
|
0.6900
|
TpSNP32
|
F: ACGTTGGATGACTCAGATGTTTAGGGTGGC
R: ACGTTGGATGATGATGCGGATGAAAGCCTG
EXT: ggGAAAATGTCATATAAGACTCAAAG
|
G/A
|
111
|
60
|
0.1202
|
0.1379
|
0.1284
|
0.6900
|
TpSNP 33
|
F: ACGTTGGATGCAGTTCCTTCATCAGCTTCG
R: ACGTTGGATGACCAGAGAAGATTCCACCAC
EXT: cCCACCCCCACCAGCGGC
|
C/T
|
105
|
59
|
0.1202
|
0.1379
|
0.1284
|
0.6900
|
TpSNP 34
|
F: ACGTTGGATGGGTTTTGTGGATTATGCCTG
R: ACGTTGGATGCGAAAGTGGTGATATAATAC
EXT: ccccACAATGTTTTCATTTTGAAAGA
|
G/A
|
124
|
44
|
0.3498
|
0.4828
|
0.4518
|
0.7125
|
TpSNP 35
|
F: ACGTTGGATGACAGCTTTAGAAGGAATAGG
R: ACGTTGGATGGCATTGGTATATGCTCTAAG
EXT: TGCATTCTTGTTTTCATGTATA
|
G/A
|
100
|
46
|
0.2992
|
0.3448
|
0.3662
|
0.7530
|
TpSNP 36
|
F: ACGTTGGATGTCCTTGGTAATCCGTGCAAC
R: ACGTTGGATGTGAGCTATCAACAGACAGAC
EXT: cccaaTCAAACAAGAAATTCATGCCG
|
G/A
|
100
|
67
|
0.0933
|
0.1035
|
0.0981
|
0.7690
|
TpSNP 37
|
F: ACGTTGGATGCTAGCGATTCTGATAGCGTC
R: ACGTTGGATGGGTGATGAAACCAAGTGTAG
EXT: GTGTAGTTATGATGTTTTTCAG
|
A/G
|
100
|
54
|
0.0933
|
0.1035
|
0.0981
|
0.7690
|
TpSNP 38
|
F: ACGTTGGATGTTCACCTCAAACTTCCCCTG
R: ACGTTGGATGACCATCACTACGTGCAAGAG
EXT: ggagTGGCAGTATTTGTGTGG
|
G/A
|
104
|
54
|
0.0933
|
0.1035
|
0.0981
|
0.7690
|
TpSNP 39
|
F: ACGTTGGATGCAACCGTATGACAAAATAGC
R: ACGTTGGATGGTCTGCTGCTTTTGTATGCC
EXT: ctcCACCTTTATTGTTTCGGAC
|
G/A
|
103
|
60
|
0.0933
|
0.1035
|
0.0981
|
0.7690
|
TpSNP 40
|
F: ACGTTGGATGACGCATTGTCCAGACACAAG
R: ACGTTGGATGTGGAGAGGAGATTTCTGGAC
EXT: ACATTACTGACCAGACG
|
T/C
|
101
|
40
|
0.0933
|
0.1035
|
0.0981
|
0.7690
|
TpSNP 41
|
F: ACGTTGGATGTTAGAATTGAGCCCTCTGCG
R: ACGTTGGATGGGAGAATTCAGTCGTTGGTC
EXT: TACACAACTACAAAGTGATACA
|
A/G
|
112
|
72
|
0.0933
|
0.1035
|
0.0981
|
0.7690
|
TpSNP 42
|
F: ACGTTGGATGAGATGGACTGAAGGATTTGC
R: ACGTTGGATGTCTGTTTGATGAACACTGAG
EXT: GAACACTGAGTTTGCATC
|
G/A
|
112
|
50
|
0.0933
|
0.1035
|
0.0981
|
0.7690
|
TpSNP 43
|
F: ACGTTGGATGGACACAAGGTCAATTTGGTG
R: ACGTTGGATGCCAATCTTTTAGGTGTTTC
EXT: TTAGGTGTTTCTACCCC
|
C/A
|
96
|
41
|
0.3738
|
0.5172
|
0.4976
|
0.8319
|
TpSNP 44
|
F: ACGTTGGATGATCAGCAGAGCTTACACTGG
R: ACGTTGGATGTAGCGCAACCTTCATGGATG
EXT: cTGCTCCTTTTCAAATATTTTTC
|
T/C
|
124
|
68
|
0.0644
|
0.0690
|
0.0666
|
0.8475
|
TpSNP 45
|
F: ACGTTGGATGGCTGGCAACGAAATGAGAAG
R: ACGTTGGATGTATCAGAAGATCCGTCAAGC
EXT: TAGCTGTAATGTTCTATTTGAATT
|
A/G
|
117
|
46
|
0.0644
|
0.0690
|
0.0666
|
0.8475
|
TpSNP 46
|
F: ACGTTGGATGAGAATTACAGACAGCGCGAG
R: ACGTTGGATGCTTCACGTCATACGCGTTAC
EXT: TCGCAACACACCCGA
|
C/T
|
94
|
40
|
0.0644
|
0.0690
|
0.0666
|
0.8475
|
TpSNP 47
|
F: ACGTTGGATGACAGATGCTACACCTTGCAC
R: ACGTTGGATGCATAAGACCAGAACCTGAAC
EXT: CAGAACCTGAACACCTCT
|
G/T
|
92
|
48
|
0.0644
|
0.0690
|
0.0666
|
0.8475
|
TpSNP48
|
F: ACGTTGGATGGAATATAATGGGCCATGTGC
R: ACGTTGGATGTGTACTTGATAACAACCCAC
EXT: ccccATAACAACCCACAGGAAT
|
A/G
|
105
|
41
|
0.0644
|
0.0690
|
0.0666
|
0.8475
|
TpSNP 49
|
F: ACGTTGGATGACTGCGGCAGTGTTACAAAG
R: ACGTTGGATGCCTGATCGCACTGCAGTTTA
EXT: AGTTTATATATTCTACATGAAGAAATAT
|
G/A
|
124
|
70
|
0.0644
|
0.0690
|
0.0666
|
0.8475
|
TpSNP 50
|
F: ACGTTGGATGGTGGAAAGTTGGTTTTGGGC
R: ACGTTGGATGACCAGTGCTGAATGGTAGTG
EXT: cttctTGGTAGTGACCAACAATCAG
|
T/C
|
91
|
55
|
0.0644
|
0.0690
|
0.0666
|
0.8475
|
TpSNP 51
|
F: ACGTTGGATGCGAGGCCAGTAAAGTTGTAA
R: ACGTTGGATGGCCTTCACAATCAAGTCTGG
EXT: TTGTTCCACTGATCAGTGAC
|
A/T
|
118
|
54
|
0.0644
|
0.0690
|
0.0666
|
0.8475
|
TpSNP 52
|
F: ACGTTGGATGTTGTATAGAGCATAATGTG
R: ACGTTGGATGCACAAACATAGCTCACGGTC
EXT: cCACGGTCTCTCATTTTAC
|
T/C
|
83
|
43
|
0.0644
|
0.0690
|
0.0666
|
0.8475
|
TpSNP 53
|
F: ACGTTGGATGCTCTATTGGTAAACTGGGTG
R: ACGTTGGATGCTTTGTTCATAGGGTGGAGC
EXT: caGTGGAGCTATGTTCTGT
|
T/C
|
105
|
43
|
0.0644
|
0.0690
|
0.0666
|
0.8475
|
TpSNP 54
|
F: ACGTTGGATGAGTAACTGGGCTTCCATCTC
R: ACGTTGGATGCAAAAAGTGACTCCACAGGC
EXT: tcttCACCAGTGTTTCCCC
|
A/T
|
93
|
46
|
0.0644
|
0.0690
|
0.0666
|
0.8475
|
TpSNP 55
|
F: ACGTTGGATGAGGAGACGAACAACAGATTG
R: ACGTTGGATGATGTTACGGCTTCCTCTTCG
EXT: TTCGTTATTTTTCTTTACTGGC
|
T/G
|
102
|
73
|
0.3197
|
0.4138
|
0.3995
|
0.8475
|
TpSNP 56
|
F: ACGTTGGATGGAGTCTAGCCTAGAAATGTC
R: ACGTTGGATGCCAATCTGGATTAGGTCAGT
EXT: AGTTGAATTGGTAATGTGAAACTA
|
C/T
|
107
|
62
|
0.2447
|
0.2759
|
0.2854
|
0.8575
|
TpSNP 57
|
F: ACGTTGGATGCCAACGACATAAGCCATTCC
R: ACGTTGGATGTACTACTGCTGGCCCTTGTAT
EXT: TGTTGCTGGCCCTCT
|
T/C
|
104
|
71
|
0.2447
|
0.2759
|
0.2854
|
0.8575
|
TpSNP58
|
F: ACGTTGGATGGGCTAGAAAATAGCTACAAG
R: ACGTTGGATGTCTAGACGGTGAAAATAGGC
EXT: GTGAAAATAGGCGACTAAAA
|
G/A
|
104
|
63
|
0.3364
|
0.4138
|
0.4281
|
0.8575
|
TpSNP 59
|
F: ACGTTGGATGGTAGATGATATTACAGAATAC
R: ACGTTGGATGTAGCTGTGCCTTCACAAATC
EXT: gAAATCAATAATATAATTGATGTTCATG
|
A/G
|
105
|
50
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 60
|
F: ACGTTGGATGGAGAAATTGACTGGTAAAC
R: ACGTTGGATGGTAGCAATCCCAGCAGATAC
EXT: CCCAGCAGATACTGCAAT
|
G/A
|
101
|
60
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 61
|
F: ACGTTGGATGCTTCAATGTTGATAAGCAGG
R: ACGTTGGATGTTCCCGTACCGGCTTATTTC
EXT: gtcTCAGCATCCATCGGA
|
A/G
|
93
|
62
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 62
|
F: ACGTTGGATGACTGGCATAGATTTCTACCG
R: ACGTTGGATGACCGACTCGGACAGCAATAT
EXT: gagATCTTCACGATTCAATTTGT
|
G/A
|
110
|
52
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 63
|
F: ACGTTGGATGTTTACATGCACCCATCCCTC
R: ACGTTGGATGTATTACAGATGGTGCCGTCC
EXT: gggagCTCTGGGAAAGGTTAGTTTA
|
C/T
|
110
|
61
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 64
|
F: ACGTTGGATGGGCCTCTGTGCTATTCTATG
R: ACGTTGGATGTGCGTAATACCAGTGATGAC
EXT: TGACATATGGCTGCG
|
G/A
|
105
|
54
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 65
|
F: ACGTTGGATGCATTTGGCCTTGAGACACAC
R: ACGTTGGATGTTTCCTGGTGTCGTACTGAG
EXT: TGAGCTATGCTTCAATGTC
|
C/T
|
100
|
72
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 66
|
F: ACGTTGGATGCCCTCCTTGAGATGGATATG
R: ACGTTGGATGTGTGGCTTTGGAACAGTTCG
EXT: CGACTCCTCGTTCAACA
|
T/C
|
116
|
69
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 67
|
F: ACGTTGGATGGCGATCAATGCTCAAAAGCG
R: ACGTTGGATGATCGTCATCACTTTTGTTCC
EXT: AATTCTTCTTACTCAACTTCCTC
|
T/G
|
104
|
64
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 68
|
F: ACGTTGGATGCTTTGTTTGTGCAGCCGATG
R: ACGTTGGATGTACTAGCAAGGAGACTCCTC
EXT: ccccCCGTACGCTGAGTAGAC
|
T/C
|
117
|
63
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 69
|
F: ACGTTGGATGCATGTCAACCTAGAAACACC
R: ACGTTGGATGACATAGATATAGCACTTTC
EXT: gATAGCACTTTCTAAAATGTACTG
|
G/A
|
91
|
69
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 70
|
F: ACGTTGGATGTTGAAAGTGGCTGCGTCATC
R: ACGTTGGATGAGCAAGAAAGGCAAATGGAG
EXT: ATGGAGTTATTCGCCCAAAT
|
C/G
|
99
|
80
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 71
|
F: ACGTTGGATGGGCAACTATCGCTCCATTAC
R: ACGTTGGATGCGAGAATGTTTGTTAGTCGG
EXT: AGTATTTTTGTGAAGAGTTTATATATG
|
T/G
|
105
|
54
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP72
|
F: ACGTTGGATGCCCTAGTCATTGAGTAAAATC
R: ACGTTGGATGTGTACCATGAAGTATGTGTG
EXT: AGTATGTGTGATGAACTTGA
|
A/G
|
82
|
47
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 73
|
F: ACGTTGGATGTTCTCAACTGGGAGATCGTC
R: ACGTTGGATGGGAAAGGAGTGAAGAAGAGG
EXT: agGATGAGGAAGATTATGAGGA
|
C/T
|
101
|
41
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 74
|
F: ACGTTGGATGCTGTGAAAAGAGCGTCTTCC
R: ACGTTGGATGCAGATTGGCAGTAATAAGCTC
EXT: GGCAGTAATAAGCTCTAAACAAAACT
|
G/A
|
95
|
61
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 75
|
F: ACGTTGGATGGATGTGACGTTGGTTGTCAG
R: ACGTTGGATGGGCCAACGATTTCGTTGATG
EXT: tctcgTGGCCGCCGTCAATTA
|
C/G
|
98
|
53
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 76
|
F: ACGTTGGATGATTCATTGTGGTGTGGAGGG
R: ACGTTGGATGTAGCACCTTGAATAAGACCC
EXT: ccatACCCAATAAATCCGAATCTCTG
|
T/A
|
104
|
79
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 77
|
F: ACGTTGGATGCCCAGCAACATCTCCAATT
R: ACGTTGGATGGGAATAAAGTAACAAACACCG
EXT: ggacAACACCGAAGTAGGGT
|
T/G
|
101
|
70
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 78
|
F: ACGTTGGATGGTATGCACGCATATACACTC
R: ACGTTGGATGATACACACAACTATGTGTGG
EXT: aaaaAACTATGTGTGGGGATGT
|
T/C
|
94
|
68
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 79
|
F: ACGTTGGATGAACGACTGTCCTTGTCTCGG
R: ACGTTGGATGGCAAGACGCGTATATTTGAG
EXT: CCCTCTTCGTAATCTATGTAA
|
A/G
|
118
|
57
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 80
|
F: ACGTTGGATGGTGGGATTTGGGATTTACGC
R: ACGTTGGATGACCGCTGTCACTCTATATCC
EXT: atagATCCTATTCTCCATCCTCTTATTA
|
G/A
|
110
|
80
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 81
|
F: ACGTTGGATGAGATGGACAGACATCTGGTG
R: ACGTTGGATGTATCTAGGGTGGAATTCAGG
EXT: GTAATATTAGCTTATGTTATAAAAAGTG
|
G/A
|
126
|
70
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 82
|
F: ACGTTGGATGATCCATTACAGAAATGAAC
R: ACGTTGGATGTTACTTTGAAATGGCAAGC
EXT: ggggATGGCAAGCTAACATGTC
|
T/G
|
90
|
47
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 83
|
F: ACGTTGGATGGTGTGGTTCCAAGTTTTCCC
R: ACGTTGGATGCAGATGTCGCATGAATATGG
EXT: gtgtTTTCACTCCGGTGTGTGCTCGCA
|
G/A
|
107
|
75
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 84
|
F: ACGTTGGATGCAAAATACAGAATTGCATAGC
R: ACGTTGGATGTGTCTCCAATGTTGCACTCG
EXT: tCACAAAGTCAGCACACTAT
|
G/T
|
106
|
51
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 85
|
F: ACGTTGGATGGTCGCCTTTTATACTACACAG
R: ACGTTGGATGAGGTGTTCTCCTAAGAGGTG
EXT: AGGTGAATGTTACTGCTA
|
A/T
|
103
|
73
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 86
|
F: ACGTTGGATGTTCCTTCTTCTCCTCAGCTC
R: ACGTTGGATGTAAGACAGAGCACACACAGG
EXT: agcaTCCCTCGGGTCTTGA
|
C/G
|
101
|
41
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 87
|
F: ACGTTGGATGCGTTCAACGAAATTGCAATC
R: ACGTTGGATGACTGGCAGAGTTAGAAGTGG
EXT: tcctATGATGCAATCCTAATCTTTACA
|
C/T
|
114
|
53
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 88
|
F: ACGTTGGATGGATTAGTCCCAAAAGGTCAG
R: ACGTTGGATGAGGAATTAGGCAAAGGCCAG
EXT: GGCCAGCAATCTCAAGA
|
C/A
|
98
|
62
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 89
|
F: ACGTTGGATGGGTTTCCTCAACTAAGCCTG
R: ACGTTGGATGTGACACATCATAGCCAGACC
EXT: ctACCGATCCAAAGAAACACAAA
|
G/A
|
102
|
50
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 90
|
F: ACGTTGGATGTCTTGACATCTGACGATCGG
R: ACGTTGGATGTGTTGAAGTCATCTGTCTGC
EXT: gagTCTGTCTGCAAGCTTGTTTC
|
A/G
|
80
|
55
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 91
|
F: ACGTTGGATGGATTATGGATTATCTCCTC
R: ACGTTGGATGACTGAACTACTTCACGGGAG
EXT: TGGACAGCTTTTATAGCTTG
|
C/T
|
88
|
56
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 92
|
F: ACGTTGGATGCGATTTTTGCCTGAAGCAGT
R: ACGTTGGATGTATGACGCAGGGCAATTCAG
EXT: CAATTCAGATATATGCTTTATCTATG
|
A/T
|
114
|
56
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 93
|
F: ACGTTGGATGCTCTCGTCTGTAAGATCTGC
R: ACGTTGGATGAGTCGGGTTTTCTGGATATG
EXT: AAAGAGGGTAGACCAAAC
|
C/T
|
87
|
41
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 94
|
F: ACGTTGGATGGAGGAGCATTGCGTCAAAAT
R: ACGTTGGATGCGACAAAATGCAGTAAAAG
EXT: TTTTCTTTCATTTCACTATTTTATTAG
|
C/T
|
133
|
77
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 95
|
F: ACGTTGGATGACGCGTACGTCTTCTGTTTC
R: ACGTTGGATGTTTGACACGGGATATATGGG
EXT: tatgGTGATAATAATTTCACATCTGTC
|
A/T
|
124
|
71
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 96
|
F: ACGTTGGATGGTTCTAGTGACACTAGTGCC
R: ACGTTGGATGCAAGTCTCTCTTCCATGCAC
EXT: CTGAGTGAAGGGCAA
|
C/T
|
100
|
47
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 97
|
F: ACGTTGGATGTTCTTGGCTGCCATGTATCC
R: ACGTTGGATGTGGTCTGCCAATATGGAACG
EXT: cATGGAACGTATTATGAAGGC
|
C/A
|
100
|
62
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 98
|
F: ACGTTGGATGGTTTTTGTGAAACTTTACAG
R: ACGTTGGATGTGTTGCCTTCAAGACAATGC
EXT: GATTGCTTCTCTGACCT
|
A/G
|
107
|
47
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 99
|
F: ACGTTGGATGCCAGTTCTGGTAGTGTTGTC
R: ACGTTGGATGCTCTTGTGTTGATTACCTCC
EXT: tTTGATTACCTCCATCACCA
|
T/C
|
104
|
44
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 100
|
F: ACGTTGGATGGTTGATTCCTCACAACGAAG
R: ACGTTGGATGGCCGCACTATTACTTCAATC
EXT: gaCTGAACACTAATTTAGAAAATGT
|
T/A
|
94
|
42
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 101
|
F: ACGTTGGATGCGCCTATCGGTGACATTTAG
R: ACGTTGGATGCTGAATAGTCCGTATTTAG
EXT: caccAGTCCGTATTTAGAGACTC
|
T/G
|
93
|
55
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 102
|
F: ACGTTGGATGGGCTGGAAATTGCTAACTGC
R: ACGTTGGATGACCATGAAGTATGTGTGATG
EXT: TGTGTGATGAACTTGATATAAGTGA
|
G/T
|
116
|
68
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 103
|
F: ACGTTGGATGTGCATTGAAGATGAGGCAGG
R: ACGTTGGATGGGATGATCAATATTTTTAGC
EXT: cctcTTTTTAGCAATCTGCAACAT
|
A/G
|
80
|
80
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 104
|
F: ACGTTGGATGGTCTCTGATGTAAGGCCAAG
R: ACGTTGGATGCTAGCAGATGCCACTTGATG
EXT: aagcTGCCACTTGATGGATCTTCTA
|
G/A
|
86
|
56
|
0.0333
|
0.0345
|
0.0339
|
0.9247
|
TpSNP 105
|
F: ACGTTGGATGCATACAAAACAGACTCAAGC
R: ACGTTGGATGCTTAGTGGTGCCACTGTTAG
EXT: ACTGTTAGTCTCATTTTGACCATA
|
G/A
|
99
|
63
|
0.3435
|
0.4483
|
0.4406
|
0.9247
|
TpSNP 106
|
F: ACGTTGGATGGAACAGGCTGTCCAATTGAG
R: ACGTTGGATGTTGGAGACATATTGCCAGCG
EXT: actGCGTTGTTCTATTCAGG
|
C/T
|
99
|
74
|
0.2601
|
0.3103
|
0.3074
|
0.9585
|
TpSNP 107
|
F: ACGTTGGATGGCCATCAGATATGCCATCAA
R: ACGTTGGATGTCTGCTCATTTGCATATAGG
EXT: TGCATATAGGTATCTTAGTAAAGGAT
|
G/C
|
89
|
77
|
0.3675
|
0.4828
|
0.4851
|
0.9789
|