Clinical characteristics. After consecutive exclusion of 1 T1DM individual from the MAGNA VICTORIA study, 5 individuals who withdraw from the RCT, and 3 individuals with missing plasma samples, 92 individuals with T2DM were included. None of the healthy controls were excluded (Figure 1).
In total, 143 subjects were included in the present study: 47 DSA-T2DM subjects (19 men/28 women), 21 DSA-C (9 men/15 women), 45 DwC-T2DM subjects (25 men/20 women), and 30 DwC-C (16 men/14 women), (Table 1).
Compared to DSA-C, systolic blood pressure, BSA, BMI, waist circumference, waist-to-hip ratio, fasting glucose, HbA1c, triglyceride levels, and VAT were higher in DSA-T2DM; while total cholesterol, HDL-C, and LDL-C were lower (Table 1). In the DwC-T2DM group, BSA, BMI, waist circumference, waist-to-hip ratio, total cholesterol, LDL-C, total body fat, and SAT were higher compared to DwC-C, together with a higher proportion of current smokers. Comparing individuals with T2DM between the ethnic groups, DSA subjects had a longer diabetes duration, a higher incidence of vascular-related complications (e.g., retinopathy and macrovascular problems), and a higher albumin/creatine ratio compared to DwC subjects.
Comparison between NMR-based results vs clinical chemistry approach. NMR-based lipoprotein subclass measurements are shown in Figure 2a. To verify the quality of the NMR measurements we compared: total triglycerides, total cholesterol, HDL-C, and LDL-C to the clinical chemistry measurements revealing a high correlation in the total cohort (R = 0.81-0.99, p-value < 2e-16) as well as any single group (Supplemental Figure S1).
Distinct HDL composition between DSA-T2DM and DwC-T2DM. To identify differences in HDL composition between the various groups, 32 HDL-related features were tested (Supplemental Table S1) using multinomial logistic regression analyses. In total, 14 lipoprotein subfraction features were different (5 higher and 9 lower) in DSA-T2DM compared to DSA-C (Figure 2b and Supplemental Table S2); 21 lipoprotein subfraction features were different (4 higher and 17 lower) in DwC-T2DM compared to DwC-C (Figure 2c and Supplemental Table S3); 14 lipoprotein subfraction features (3 higher and 11 lower) were different in DSA-T2DM compared to DwC-T2DM (Supplemental Figure S2a and Supplemental Table S4); 20 lipoprotein subfraction features were lower in DSA-C than DwC-C (Supplemental Figure S2d and Supplemental Table S5). We found that 7 lipoprotein subfractions were specifically different in DSA, 13 lipoprotein subfraction features that were unique to DwC, and 8 lipoprotein subfractions that were common to both ethnicities (Figures 2c and f).
Multinomial logistic regression analysis was used to evaluate the association between HDL composition and the odds of having T2DM. The common trend in both ethnic groups showed that higher free cholesterol content in all HDL subfractions was associated with lower odds of having T2DM, while higher triglyceride content in total HDL, HDL-2, and HDL-3 was associated with higher odds of having T2DM (Figures 2d and g). Specifically, in DSA with T2DM we found a distinct HDL composition phenotype when compared to DwC with T2DM. These findings revealed that higher ApoA1-, Apo-A2-, and cholesterol content in the smallest and dense HDL (i.e., HDL-4), and higher total ApoA2 were associated with lower odds of having T2DM in DSA, whereas higher triglyceride content in the largest HDL particles (i.e., HDL-1) was associated with higher odds of having T2DM (Figure 2d). In the total DwC population, higher triglyceride content in HDL-4 was associated with higher odds of having T2DM while higher ApoA1 and total lipid content in the larger HDL fractions, especially in HDL-1, were associated with lower odds of having T2DM (Figure 2g).
When we compared T2DM subjects between DSA and DwC, notable changes were observed that in all the small and dense HDL subfractions, total ApoA1 and ApoA2, and phospholipid content in total HDL (HDPL) were higher and while in DwC-T2DM, large HDL subfractions such as ApoA1, cholesterol, and phospholipid content in HDL-1 (H1A1, H1CH, and H1PL) were lower in DSA with T2DM compared to those in DwC (Figure 2i). Considering the higher prevalence of T2DM in DSA, we also compared HDL composition among healthy individuals of both ethnicities and found that the majority of HDL composition except for small and dense HDL subfractions was lower in DSAs, and within small and dense HDL, only H4PL was lower in DSA-C (Supplemental Figures S2a and b). Our findings revealed ethnic differences in HDL composition between DSA and DwC, as well as changes in HDL composition in T2DM between two ethnicities that were not detectable by routine lipid or laboratory assessments.
HDL composition in plasma can differentiate patients with T2DM from healthy controls in two ethnic groups. Using HDL-related features, sPLS-DA, a supervised machine learning method combining variable selection and classification in a one-step procedure was performed. When comparing the T2DM between two ethnic groups, a significant separation was observed (Figure 3a).
Ranking HDL-related feature measurements by discriminating capability, we found all HDL-4 subfractions and total ApoA2 had the greatest contribution (Figure 3b). Notably, when comparing the rank generated from MLR and sPLS-DA, they were highly correlated (ρ = 0.9, p-value = 6.2e-8, Figure 3c), which further validated our previous findings. Meanwhile, similar but less profound findings were found in healthy individuals between the two ethnic groups (Supplemental Figures S2c-e). In addition, a clear separation between T2DM and healthy control was observed in both ethnicities, and the top 5 ranked features in DSA were free cholesterol content in total HDL and subclasses (HDL-2, HDL-3, and HDL-4) and ApoA2 in HDL-4 (HDFC, H2FC, H3FC, H4FC, and H4A2); those in DwC were free cholesterol content in total HDL and subclasses (HDL-1, HDL-2, and HDL-4) and ApoA1 in HDL1 (HDFC, H1FC, H2FC, H3FC, and H1A1), (Supplemental Figures S3c-d). The rank generated from MLR and sPLS-DA were highly correlated in both ethnic groups (ρ = 0.94-0.98, p-value < 2e-16, Figures 3e-f). These results suggested that HDL composition was different in T2DM and had ethnic specificity, especially ApoA2 and HDL-4 subfractions.
HDL anti-thrombotic capacity reduction in T2DM subjects in both ethnicities. Anti-thrombotic capacity was measured in 142 people to evaluate HDL functionality (47 DSA-T2DM, 21 DSA-C, 45 DwC-T2DM, and 29 DwC-C). Based on the thrombin generation curve, diabetic subjects had a higher curve than non-diabetic subjects in both ethnic groups (Supplemental Figures S4b and d). Furthermore, the endogenous thrombin potential (ETP) was significantly higher in T2DM patients versus healthy controls in both ethnicities (Supplemental Figures S4c and e), revealing that HDL functionality in anti-thrombin formation was impaired both in DSA and DwC with T2DM.
Associations between differential HDL composition and clinic outcomes. We further investigated the associations between differential HDL composition (ApoA2 and HDL-4 subtractions) and clinic outcomes (laboratory and anthropometric markers). In DSA-T2DM, with 1 SD increase of ApoA2 and cholesterol content in HDL-4 (H4A2 and H4CH), we found decreased levels of VAT. With 1 SD increase of ApoA1, ApoA2, phospholipids, free cholesterol, and cholesterol content in HDL-4 (H4A1, H4PL, H4FC, and H4CH), we observed lower waist circumference and waist-to-hip ratio; while with 1 SD increase of triglyceride content in HDL-4 (H4TG), we observed higher waist-to-hip ratio. 1 SD increase of H4PL and H4FC, was associated with lower fasting glucose and HbA1c; and per SD increase in H4CH was negatively associated with HbA1c. Interestingly, no association was observed between differential HDL composition in DSA-T2DM and GGT (Supplemental Figure S5a).
In DwC-T2DM, per 1 SD increase of total ApoA2 and H4A2, a negative association was observed with waist circumference and waist-to-hip ratio. 1 SD increase of H4FC was associated with lower fasting glucose. Per SD increase of H4TG was positively associated with GGT. No associations were found with levels of VAT and HbA1c. These data suggest that changes in HDL composition were clinically relevant, especially in DSA-T2DM which could partly reflect long-term dysregulated blood-glucose control.
Associations between differential HDL composition and pan-microvascular-related complications. Glycaemic control is associated with multiple diabetes-related complications, especially microvascular problems; therefore, we then investigated the associations between differential HDL composition (ApoA2 and HDL-4 subtractions) and microvascular complications. Interestingly, there was no association between HDL composition and pan-microvascular-related complications in white Caucasian subjects with T2DM, while, in DSA-T2DM, we observed total ApoA2, H4A1, H4FC and H4PL were lower in patients with pan-microvascular-related complications (Figure 4a).
When we compare single complications, TPA2, H4A1, H4A2, and H4FC were significantly lower in DSA-T2DM with retinopathy, while H4FC was higher in DwC-T2DM with retinopathy (Figure 4b). In DSA-T2DM, TPA2, H4A1, H4A2, H4CH, H4FC, and H4PL were significantly lower in diabetic neuropathy while none of these HDL compositions were associated with diabetic neuropathy in DwC-T2DM (Figure 4c). None of the differential HDL composition was changed between with and without diabetic nephropathy (Figure 4d). These data suggest that HDL composition changes, especially TPA2 and HDL-4 subfractions except for H4TG, in DSA were associated with diabetes-related microvascular complications such as neuropathy and retinopathy.