General
Dulbecco’s Modified Eagle Medium (DMEM), 1640 Medium and fetal bovine serum were obtained from Hyclone (Invitrogen Corporation, NY, USA), CCK-8 reagents were obtained from Dojindo (Kumamoto, Japan), oxidized low density lipoprotein (ox-LDL, MDA 30 μM) was obtained from Institute of Basic Medicine, Peking Union Medical College (Beijing, China), anti-LXRα antibody, anti-ABCA1 antibody were obtained from novusbio Biologicals (IL, USA), anti-CD68 antibody was obtained from Sigma-aldrich (CA, USA), anti-IL-1β antibody and anti-TNF-α antibody were obtained from Santa Cruz Biotechnology (TX, USA), PE-conjugated secondary antibodies and PE-conjugated secondary antibodies were obtained from Biolegend Inc (SD, USA),Oil Red O, atorvastatin, T-PER protein extraction reagent and SR9243 were obtained from Sigma-Aldrich (CA, USA), reporter genes were synthesized by Shanghai Genechem Co.,Ltd.(Shanghai, China), IL-1β and TNF-α ELISA kit were obtained from Dakewe Biotechnology (Beijing, China),BCA assay kit was obtained from Beyotime (Shanghai, China), bovine serum albumin was obtained from Sangon Biotech (Shanghai, China), HRP-conjugated anti-β-actin antibody was obtained from Kangchen Inc.(Shanghai, China).
Animals and treatments
To study the preventive and therapeutic effects of compound on atherosclerosis in vivo, Seventy-two male C57BL/6 ApoE-/- mice aged 8 weeks (22–25 g) were purchased from Peking University Health Science Center (Beijing, China). The mice were housed under specific pathogen-free conditions on a 12-hour light-dark cycle in the animal facility at the Animal Center of the Third Military Medical University. Animals were randomly divided into five groups (n=6) and provided with unlimited access to water and high-fat and high-choline diet (basic feed containing 40% fat and 1.25% cholesterol and 0.5% sodium cholate), except the control group with basic feed. Animals were treated with CKN (3 mg/kg), CK (3 mg/kg) and atorvastatin (3 mg/kg) by intra-peritoneal injection once a day. After 10 weeks, the mice were fasted overnight and sacrificed by CO2 inhalation in accordance with the AVMA guidelines for the euthanasia of animals, 2013 edition. Samples were collected for the subsequent experiments.
Histology and Image analysis of aortic
For en face analysis, the thoracic aorta and brachiocephalic trunk were opened longitudinally and fixed by 10% formalin. The samples were stained with Oil-Red O for 15 minutes and washed. The cross-sections of aorta root were separately stained with hematoxylin/eosin (H&E), and cross-sections of aorta root were separately stained with CD68 and ABCA1. We used 4% PFA solution to fix mouse liver tissues. Sections of the liver samples or the frozen liver tissues were stained with H&E or Oil Red O. The sections were examined under a light microscope Images were captured with Laser Confocal Microscope (Nikon Eclipse 90i light microscope), Image-Pro Plus 6.0 software were used to aortic tissues semiquantitative analysis.
Serum lipid and cytokines
Blood sample was collected from the abdominal vena cava and the plasma supernatants were collected for further study. The levels of total cholesterol (TC), low-density lipoprotein cholesterol (LDL-C), triglycerides (TG), and high-density lipoprotein cholesterol (HDL-C) were detected using an AU-2700 automatic biochemical analyzer (Olympus, Tokyo, Japan). The serum cytokine levels, including tumor necrosis factor-α (TNF-α) and interleukin-1β (IL-1β), were detected using a Mcytomag-70K-3 Mouse Cytokine/ Chemokine Magnetic Bead Panel (Merck Millipore Co. LTD).
Immunofluorescence
The murine macrophage cell line RAW264.7 was obtained from the Cell Bank of the Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences. Immunofluorescence assay was performed to detect the expression and the distribution of CD68 and ABCA1 in the aortic tissues, or LXRα and ABCA1 in RAW 264.7 macrophages. After being blocked by goat serum for 60 min at room temperature, the samples were incubated with primary antibodies overnight at 4 °C. Subsequently, the samples were treated with the corresponding PE-conjugated secondary antibodies or FITC-conjugated secondary antibodies for 60 min at room temperature and 4, 6-diamidino-2-phenylindole (DAPI) in the dark. Images were visualized under a fluorescence microscope (OLYMPUS fv1000, Japan) at 400× magnification.
Cytotoxicity assay
Cellular toxicity assays were carried out using the CCK-8 method. RAW 264.7 macrophages were seeded in 96-well plates at 5×104/mL in RPMI-1640 containing 10% fetal bovine serum. The cells were treated with 3, 10, or 30 μM of CKN for 24 hours. Ten microliters per well of CCK-8 reagent was then added. The cells were incubated at 37 °C for 1 hour, and the OD value was measured at 450 nm by SpectraMax M3 microplate reader (Molecular Devices, CA, USA). The experiments were performed in triplicate.
Intracellular ox-LDL internalization stained by oil red O
RAW264.7 cells were cultured in 6-well plates (5 × 105/mL), cells were processed as follows: (a) the control group was treated with 1640 culture medium, (b) the model group was treated with 100 μg/ml ox-LDL for 24 h, (c) the DMSO group was treated with 100 μg/ml ox-LDL+0.5%DMSO for 24 h, (d) the CKN group was treated with different concentrations of CKN dissolved in DMSO along with 100 μg/mL ox-LDL for 24 h. Then the cells fixed with 4% paraformaldehyde and then stained with Oil Red O, red stained intracellular internalization ox-LDL was visualized under a phase-contrast microscope (Leica DM500). Subsequently, washed Oil Red O-stained cellular lipid was extracted by isopropanol (250 μL/well), and the optical density at 500 nm was determined. The OD values were calculated relative to the model group. The experiments were performed in quintuplicate.
In vitro anti-inflammatory effect
The anti-inflammation effect of CKN on macrophages was conducted in 24-well plates. Cells were incubated with 100 ug/mL ox-LDL, meanwhile treated by CKN for 24 h. Then, culture media were harvested to detect expression of tumor necrosis factor-α (TNF-α) and interleukin-1β (IL-1β) by ELISA kit.
Western blotting
After treatment, aorta tissue or cells were homogenized on ice for 10-20 min in 50 mM T-PER, 150 mM NaCl, and 2 mM DTT (Thermo Fisher Scientific), and total protein concentrations were determined using a bicinchoninic acid protein assay kit (Thermo Fisher Scientific). Equal amounts of protein extracts were separated using 10% sodium dodecyl sulphate polyacrylamide gel electrophoresis. After blocking by 5% defatted milk for 1 h at room temperature, the PVDF (Millipore, USA). membrane with protein on it was treated with the primary antibodies overnight at 4 °C and corresponding secondary antibody for 30 min at room temperature. After washing with TBST, membranes were incubated with a horseradish peroxidase-conjugated secondary antibody for 1 h at room temperature. Finally, proteins were visualized using an enhanced chemical luminescent system (BLT GelView 6000 Pro).
Dock into the LXRα
Chem Draw 12.0 program was used for converting the chemical structures into 3D conformation. Ligand preparation was done using Pymol 1.8.6. The crystal structure of mouse LXRα (PDB entry: 5 AVL) was prepared by SYBYL-X 2.0. After the software validation by re-docking method with respective reference ligands CKN was docked into the active site of the LXRα within the radius of 6.5 Å (default). Other parameters were set referring the default values. The docking scores and suitable binding patterns were reported by comparing with the reference ligands.
Reporter gene experiment
HEK293T cells were adjusted to 5 × 105/mL in DMEM containing 10% (v/v) fetal bovine serum. LXR-α-pcDNA3 or LXR-β-pcDNA3, LXRE-Luc (reporter plasmid), and pSV-β-galactosidase (transfection efficiency control) were transfected into HEK293T cells, and the cells were cultured for 48 h prior to further treatments. Different concentrations of CK and CKN were added into the medium and GW3965 (10 μM) was used as positive control.
Cellular Thermal Shift Assay
The RAW264.7 cells were collected and lysed in 50 mM T-PER, 150 mM NaCl, and 2 mM DTT. Then two groups divided in EP tubes. One group was mixed with 30 μM CKN, and the other was mixed with 0.5% DMSO as a negative control. The samples were heated at 45 to 69 °C under the same conditions using a heat block. Each sample was heated at a single temperature for 2 min, placed on ice, and centrifuged at 12,000g for 30 min. The supernatant was collected for western blotting testing.