Animals
C57BL/6 female mice were provided by Soochow University Animal Experimental Center. All mice maintained in SPF level room with temperature 21 ± 2 °C, humidity 30%–35%, 12/12-h dark/light cycle, and free access to food and water. All experimental procedures followed the guidelines of animal research of the Science and technology department of China and were approved by the ethics committee of animal research Soochow University.
Model of SCI and tissue preparation
Surgical procedures for SCI model were performed as previous report [30]. C57BL/6 female mice were anesthetized by intraperitoneal injection of 3% pentobarbital. A laminectomy was performed at T9-T11 levels to expose the T10 thoracic spinal cord. The spinal cord was contused with a Multicenter Animal Spinal Cord Injury Study (MASCIS) Impactor weight-drop device. A 5-g weight impact rod dropped from 25 mm in height to produce a reliable contused SCI model (impacting force: 125 kdyn). In contrast, mice in the sham group were only performed laminectomy. After the surgery, all mice were individually housed. An intramuscular injection of antibiotics (20 ,000 units penicillin) was provided for three consecutive days. Massage the bladder of mice in the SCI group to help void twice a day until spontaneous voiding resumed.
Mice were sacrificed at different time points for the specific experiments. Mice were anesthetized and transcardially perfused with cold phosphate-buffered saline (PBS). For proteomic analysis (n = 3/time point) and Western blot assays (n = 3/time point), the spinal cord tissues (a 10 mm length of spinal cord tissue, including the center of SCI) were removed and stored at – 80 °C for processing. To perform H&E and fluorescent staining (n = 5/time point), the animals were perfused with PBS followed by 4% ice-cold paraformaldehyde. The spinal cord tissue samples were dissected and post-fixed with paraformaldehyde overnight for subsequent experiments.
Mass spectrometry (MS) analysis
Briefly, total protein was extracted from spinal cord tissue, followed by filter-aided sample preparation (FASP Digestion) [31]. Then, the above sample was loaded onto the C18-reversed phase analytical column (Thermo Fisher Scientific, Acclaim PepMap RSLC 50um X 15cm, nano viper, P/N164943) at a flow rate of 300 nL/min. LC-MS/MS analysis was performed using an Orbitrap Exploris 480 mass spectrometer (Thermo Scientific) coupled with Easy nLC (Thermo Scientific). Finally, MS data were analyzed using MaxQuant software v1.6.17.0.
Cell culture
HT22 and Neuro2A cell lines were purchased from the type culture collection of Chinese Academy of Sciences (Shanghai, China). Cells were cultured incells cultured in DMEM medium (Hyclone, Beijing, China), containing 10% fetal bovine serum (FBS) (Gibco, Carlsbad, CA, USA) and 1% penicillin/streptomycin (Thermo Scientific) at 37 °C with 5% CO2 .
Primary cortical neurons were isolated from embryonic stage 15 (E15) mice and cultured. Briefly, the cerebral cortex was separated and then digested with type I collagenase (Gibco) and Accutase (Sigma, St. Louis, MO, USA) for 30 min at 37 °C in sequence, and gently agitated by every 5 min. After digestion inactivated with 10% FBS, and filtrated through a 70 µm pore-sized mesh, centrifuged at 1,000 rpm for 5 min at 4 °C, and cell precipitate was collected. Neurons were then plated onto Poly-D-Lysine (Gibco) coated dishes in Neurobasal medium (Gibco) supplemented with 2% B27 supplements (Gibco), 0.5 mM L-glutamine (Sigma) and 1% penicillin/streptomycin (Thermo Scientific) at a density of 300 neurons/mm2. Neuronal cultures were incubated at 37 °C with 5% CO2. The neurons were used for subsequent experiments after 5–7 days.
Lentivirus infection and production of stable cell lines
The lentivirus infection was manipulated by referring to instructions. All cells were in good condition. HT22 and Neuro2A were seeded in six-well plates for 12–16 h to be 20%–30% confluence. Neurons cultured for 3–5 days in vitro were infected with lentivirus. Then, the shRNA lentivirus, the control lentivirus, and the overexpression lentivirus (GeneChem) were added to the plates based on cell MOI and virus titer. Fresh medium was replaced after 16 h, and culture was continued. After 48–72 h of viral infection, the cells, except primary cortical neurons, were treated with a medium containing puromycin (1 µg/ml, SigmaSigma-Aldrich) to remove noninfected cells. Subsequently, the medium was replaced with fresh medium, and cells were evaluated under a microscope within 3–5 days. The stable cells were used for further experiments.
Real-time PCR
Total RNA was first extracted with Trizol (Thermo Scientific) and then converted to cDNA using a RevertAid cDNA Synthesis Kit (Thermo Scientific). Real-time PCR was performed three times in 20 μL reactions using iQ SYBR Premix Ex Taq Perfect Real Time (Bio-Rad Laboratories, Inc., Hercules, CA, USA), 50 ng of first-strand cDNA, and 0.2 mg of each primer. The cycle threshold(CT) method was used to calculate relative expression levels. Relative mRNA levels were determined by the 2−ΔΔCT method using GAPDH as endogenous control. For RT-PCR, the primers were as follows:
Mus-MST2 forward primer: 5'-CCAGGCCCTATGTCCAACAG-3', reverse primer: 5'-GGTCTAGTGCTTTTAGCCGC-3';
Mus-NF200 forward primer: 5'-GCAGCCAAAGTGAACACAGAT-3', reverse primer: 5'-TCCCACTTGGTGTTTCTCAGC-3';
Mus-βⅢ-tubulin forward primer: 5'-CACCTCCCTTCGATTCCCTG-3', reverse primer: 5'-CATCGAACATCTGCTGCGTG-3'.
For internal control, we used GAPDH primers as follows:
Mus-GAPDH forward primer: 5'-ATCACTGCCACCCAGAAGAC-3', reverse primer: 5'-ATCCACGACGGACACATTGG-3' (Sangon Biotech, Shanghai, China).
Immunoprecipitation and western blot analysis
Western blot analysis was performed as previously reported[32]. Briefly, protein from spinal cord tissues and cells was extracted using RIPA lysis buffer containing protease inhibitor cocktail at 4 °C for 10 min and centrifuged at 4 °C and 12,000 rpm for 15 min. After that, equivalent protein samples were separated using SDS-PAGE and transferred to PVDF membrane (Millipore, Burlington, MA, USA). Afterward, the membrane was blocked with 5% BSA for 1 h and then incubated overnight at 4 °C with primary antibodies, including β3-tubulin (#5568; CST, Danvers, MA, USA), GAPDH (#2118; CST), p-AKT (S473) (#4060; CST), AKT (#4691; CST), MST2 (#ab52641; Abcam, Cambridge, UK), Flag (#AE005, ABclonal, Wuhan, China), Flag (#AE092; ABclonal), MST2 (#A9036; ABclonal), NF200 (#DF6060; Affinity Biosciences, Cincinnati, OH, USA). On the next day, PVDF membranes were incubated with the enhanced chemiluminescence (ECL) reagents (Thermo Fisher Scientific) to visualize protein bands using Tanon-5500 (Tanon Science & Technology, Shanghai, China), which were then quantified using densitometric analysis of ImageJ v1.57[33].
For immunoprecipitation, cells were lysed in IP buffer (Thermo Scientific) and centrifuged at 14,000 rpm for 15 min at 4 °C. Only 5% of the lysate was saved as input control. The remaining lysate was mixed with antibodies at 4 °C overnight and then incubated with protein A/G PLUS-Agarose beads (Santa Cruz Biotechnology, USA) at 4 °C for an additional 4 h. After being washed with IP buffer, the precipitates were analyzed using western blotting. Light chain-specific secondary antibody was used to eliminate heavy chain interference.
Immunofluorescence(IF) on neurons
The neurons were seeded in the 24-well plate and washed with cold PBS 72 h after transfection. Neurons were fixed in −20 °C methanol for 15 min, washed with PBS supplemented with Tween 80 (PBST), and permeabilized with 0.3% Triton X-100 for 10 min. The neurons were then incubated overnight with primary antibodies at 4 ° C. The next day, cells were incubated with secondary antibodies at room temperature for 1 h, and the nuclei were stained with DAPI for 5–10 min. The images were sequentially photographed using a fluorescent microscope (Nikon, Tokyo, Japan). For quantitative morphological evaluation, the Image J software v1.57 was used .
Lentiviral vector injection after SCI
Immediately following SCI, lentiviral vectors were injected into two points at a distance of 1.5 mm rostral and caudal to the center of the lesion site with a depth of 1.0 mm. 5 μL of lentiviral solution (1×108TU/mL) were injected at a fow rate of 50 μL/min for each site through a microinjection needle, which connected to a Hamilton syringe driven by a microinjection pump. After injection, the microinjection needle was left for 2 min and then withdrawn slowly from the injection site. Muscles and skin were then sutured.
Hematoxylin and eosin(HE) staining
After deparaffinization and rehydration, spinal cord tissue sections were stained in hematoxylin solution (beyotime, China) for 5 min and eosin solution (beyotime, China) for 2 min, followed by dehydration with graded alcohol and clearing in xylene. The slides were mounted, examined, and photographed using a microscope (Nikon, Tokyo, Japan).
Immunofluorescence on tissue
IF staining was conducted as previously described [27]. Briefly, the spinal cord was collected, and 20-µm-thick frozen sections were prepared. The samples were then incubated overnight at 4 °C with primary antibodies. Subsequently, sections were incubated at 37 °C for 1 h with secondary antibodies labeled with Cy3/FITC. The slides were then washed and stained with DAPI, and coverslipped using Vectashield mounting media (Vector Laboratories, Burlingame, CA, USA). All tissue samples were processed under the same conditions and observed using a fluorescent microscope (Nikon, Tokyo, Japan). Morphological evaluation was quantified using the ImageJ software v1.57 [33].
Basso mouse scale(BMS) and footprint test
Recovery of motor function was assessed using the BMS for locomotion [34]. All mice were observed for 5 min by two observers in a blinded manner. Scoring was based on different parameters such as ankle movements, paw placement, stepping pattern, coordination, trunk instability, and tail position. Mice were tested before injury (day -1) and on days 1, 3, 7, 14, 28, and 42 after injury. Mice with a BMS score of > 3 (some stepping) at one day after injury were excluded from the analysis. For the footprint test, the hind paws with non-toxic dyes were recorded during continuous locomotion on a 50-cm runway. Stride length width between two sides of the prints were measured and calculated from multiple steps.
Radiographic assessment
Magnetic resonance imaging (MRI) scans of mice were performed 7 days and 42 days after SCI to assess the integrity of spinal cord. Briefly, mice were anesthetized as described above and placed in an MR scanner (Supernova 1.5T, QuantumTec Medical Devices Limited, Beijing, China) with a whole-body coil to obtain MR images of the spinal cord.
Statistical analysis
All results are expressed as mean value ± SD of three independent experiments. Differences between experimental groups were evaluated using two-tailed unpaired Student's t-test or one-way ANOVA followed by post hoc test analysis. Two-way repeated-measures ANOVA was used to compare time course data of groups, and post hoc Bonferroni test was used to compare means at each time point unless otherwise stated. Statistical analyses were performed using GraphPad Prism software, and P < 0.05 was considered statistically significant.