Acquisition of Primers used for Fluorescence Quantification
Eight gene-specific primers were finally obtained through the validation of conventional PCR amplification--electrophoresis single bands, fluorescence quantitative PCR single melting curve and amplification efficiency. The sequence of primer name, annealing temperature and amplification efficiency of each gene are shown in Table 1:
Table 1 Primers Used for Fluorescent Quantitative PCR
Primer
|
Sequences(5’-3’)
|
TM
|
Amplification efficiency
|
NCBI Accession number
|
β-actin-F
|
GCTGTGCTATGTCGCCTTG
|
59.28
|
96.4%
|
NM_001308179.1
|
β-actin-R
|
TACCAAGGAAGGAAGGCTGG
|
59.01
|
|
|
TLR2-F
|
TGTTACGGTTTGACTGGCGT
|
60.18
|
102.2%
|
XM_025061574.1
|
TLR2-R
|
AAGATTGGGCATGTAGCCCC
|
60.11
|
|
|
MyD88-F
|
GTGTGTGGACCATCACGAGT
|
59.97
|
91.3%
|
NM_001294201.1
|
MyD88-R
|
ACGTTTCTTCTCGGCTCCAG
|
60.04
|
|
|
NF-κB-F
|
AGCTACGAGGTCTCAGGAGG
|
60.11
|
102.9%
|
XM_025063059.1
|
NF-κB-R
|
CCTCTACAGTGGAGCCTTGC
|
60.11
|
|
|
CD28-F
|
AGATTGGACTTGCTGTTGAT
|
54.93
|
104.2%
|
XM_008325487.3
|
CD28-R
|
GGCTTGGTGTTGATGTAGT
|
55.10
|
|
|
CD40-F
|
ATTCGTGTCATTCGCTCGC
|
59.00
|
107%
|
XM_025059755.1
|
CD40-R
|
ACTGTGTGCCAAAGATGTCCC
|
60.82
|
|
|
IL-1β-F
|
ATCTCGAGGAAGTGAAGGACCC
|
61.21
|
96%
|
NM_001297581.1
|
IL-1β-R
|
ATAGCGCTGGCTGGTCTCT
|
60.76
|
|
|
TNF-α-F
|
CGACACCTGGCTGTAAACGA
|
60.32
|
100%
|
XM_008331806.3
|
TNF-α-R
|
CAACCCCAAAATGACCAACTC
|
57.61
|
|
|
TLR2 Expression in Liver, Kidney, Gill and SpleenTLR2
The expression of TLR2 in the liver of soaking group was significantly higher than that of the control group at 0h, and the expression of TLR 2 in the two experimental groups increased first and then decreased at other time points, which was consistent with the change of the expression of MyD88 in injection immunization. The expression of TLR2 in the liver of soaking group was the highest at 48h, which was 2.37 times that of the control group, while the expression of TLR2 in injection group was the highest at 12h, which was 2.72 times that of the control group. The transcription value of TLR2 in the kidney of soaking group was significantly higher than that of the control group from 0h, and then the transcription level was basically 1-3 times that of the control group from 4h to 7d, and its expression peak was 2.87 times that of the control group at 72h, and then gradually decreased;In the kidney of the injection group, the number of transcripts increased significantly from 8h, and the maximum value appeared at 72h, which was 5.78 times that of the control group, and then the expression gradually became lower until 7d when it was basically not significantly different from the control group. In gill tissues, the transcriptional values of TLR2 in the immersion group appeared to increase and then decrease, reaching a peak at 8h, which was 3.3 times that of the control group, and the expression at subsequent time points was basically 1-2 times that of the control group;However,TLR2 expression in the gills of the injection group reached a small peak at 48 h, which was 4.36 times that of the control group, followed by a peak at 7d. In the spleen of the soaked group, the expression of TLR2 reached a peak at 0h, and then appeared to increase and then decrease, with the maximum value at 48h being 1.75 times that of the control group;However, in the spleen of the injection group, the expression of TLR2 showed a trend of increasing first and then decreasing, and reached the maximum at 24 hours, which was 1.9 times that of the control group. TLR2 was significantly elevated in all four organs across immunization modalities, with faster onset of immunization in the liver, kidney and spleen in the immersion group than in the injection group, with higher gene upregulation in the gill tissue than in the other tissues in the immersion group, and significantly higher levels of gene upregulation in the kidney than in the other tissues in the injection group.
Expressions of MyD88 in Liver, Kidney, Gills and Spleen
The expression of MyD88 in the liver of the immersion group all showed a down-regulation performance, MyD88 was significantly lower than the control group from 4h, and then continued to decline, reaching the lowest at 8h, which was 0.4 times that of the control group, and then gradually up-regulated. the expression of MyD88 in the liver of the injection group showed a trend of rising, then falling and then rising again, reaching the first small peak of expression after 8h of injection, after which the expression became smaller, and the highest peak of expression was reached at 96h, with the two peaks being 1.52 and 3.33 times that of the control group. In the kidney, the expression of MyD88 was basically unchanged in the immersed group compared with the group immersed in seawater, and a small peak of expression occurred in the immersed group at 8h, which was 1.21 times that in the control group. However, the expression level in the injection group increased first, then decreased and then rose again. The two small peaks of expression level appeared at 8 hours and 72 hours respectively, which were 3.44 times and 1.99 times that of the control group. In gill tissue, compared with the control group, the expression level of MyD88 in the soaking group reached the first peak at 0h, which was 2.99 times that of the control group, and then decreased rapidly and then rose again, and the second peak at 7d was 2.77 times that of the control group. However, in the injection group, MyD88 increased in gill from 0 to 4 hours, and reached the first peak at 4 hours, which was 2.06 times that of the control group, and then showed a trend of decreasing and then increasing, and the expression reached the peak at 72 hours, which was 2.66 times that of the control group. In the spleen, MyD88 reached a peak at 0 h in the immersion group, similar to the trend at 0 h in gill tissue, after which it rapidly became lower and showed a second small climax at 7d, which was 2.14 times that of the control group. In the injection group, MyD88 basically increased first and then decreased, and its peak appeared at 24 hours, which was 1.85 times that of the control group.
Expression of NF-κB in Liver, Kidney, Gills and Spleen
In the liver, NF-κB showed an overall increase, then decrease and then increase in both experimental groups, reaching its first maximum at 48 h, which was 1.3 times that of the control group, and its maximum at 7d, which was 2.15 times that of the control group. In contrast, in the injection group, NF-κB showed a rise in the liver from 0-8h, with a peak at 8h, which was 3.17 times that in the control group, and showed a trend of decreasing before rebounding in the following time points, and the expression increased at 7d, which was 2.03 times that in the control group. In kidney tissues, the expression of NF-κB in the immersion group was significantly higher than that in the control group from 0h, 1.42 times that in the control group, and the transcript level was basically lower than that in the control group in the following time points. However in the injection group, the expression of NF-κB appeared to first increased and then decreased, reaching a peak expression at 8 h, which was 3.32 times that of the control group. In the gill tissues, the NF-κB expression in the immersion group first decreased and then increased, and the lowest and highest values of expression were 0.4 and 2.67 times at 8h and 72h, respectively. The expression of NF-κB in the immersion group was significantly higher than that in the control group from 72h, while it still maintained a relatively high level at 7d, while the expression in the injection group basically showed a phenomenon of increasing and then decreasing, with its expression reaching a peak at 4h, which was 3.2 times that of the control group, and then gradually decreasing, with no significant difference from that of the control group at 7d. In spleen, after the expression of MyD88 in the immersion group reached the highest peak at 0h, it declined rapidly thereafter and showed an overall slow increase during the time point of 4h-7d, reaching a second small peak of expression at 7d, which was 2.64 times higher than that of the control group. However the expression trend of MyD88 in the injection group showed a rising trend followed by a decreasing trend, reaching a maximum at 24 h and then slowly decreasing.
Expression of CD40 in Liver, Kidney, Gills and Spleen
The CD40 gene transcripts were significantly higher in the four tissues of the immersion group at 0h than in the control group. In liver and kidney, the CD40 gene transcripts in the soaking group were significantly less expressed than the control group at all time points except for 0h. However, the total expression of CD40 in the liver of the injection group increased at first and then decreased. The highest transcription level was 2.62 times that of the control group at 8 hours, and then the expression level gradually decreased. At 7days, the expression level reached the second small peak, which was 2.03 times that of the control group.The expression of CD40 in the kidneys of the injection group showed a general trend of increasing and then decreasing, and the expression at 8 h was significantly higher than that of the control group, which expression was 4.51 times of its transcript amount, and then the expression decreased and peaked again at 7d, which was 2 times higher than that of the control group. In gill tissues, CD40 in the soaking group showed a trend of up-regulation, then down and then back up, reaching a small peak of expression at 8h, which was 1.9 times higher than that of the control group, followed by a down-regulation, and the expression reached peak at 7d, which was 2.28 times that of the control group. However the transcript amount of CD40 in the injection group showed a trend of increasing and then decreasing, and the maximum transcript amount appeared at 48 h, which was 1.64 times that of the control group, and then the expression amount slowly decreased and at 7d,there was no significant difference between the expression amount of the injiction group and that of the control group. In the spleen, the expression of CD40 in the immersion group was significantly higher than that in the control group at 0h and 7d, and significantly lower than that in the control group at the rest of the time. However in the injection group, the total transcription increased first and then decreased, reaching a maximum of 1.99 times that of the control group at 24 hours, and then decreased to 7days, which was significantly lower than that of the control group. Overall, the highest expression level of CD40 in 4 tissues in the soaking group appeared earlier than that in the injection group, but the transcription level of CD40 in liver, kidney and gill tissues in the injection group was higher than that in the soaking group.
Expression of CD28 in the Liver, Kidney, Gills and Spleen.
CD28 showed a significant overall down-regulation in the livers of the soaking group, while the expression was significantly lower than that of the control group. In the injection group, the expression of CD28 in the liver showed an overall trend of increasing and then decreasing, and the transcript amount from 8h was significantly higher than that of the control group while the maximum value appeared, which was 2.98 times higher than that of the control group. A second small peak of expression occurred at 7d, which was 1.76-times that of the control group. The CD28 transcripts amount at 0h in the kidney, gill and spleen of the immersion group showed higher expression than that of the control group. In the kidney, the expression of CD28 in the immersion group was significantly higher than that in the control group at 8h, 1.38 times that of the control group, and reached a second peak of transcription by 96h, 1.28 times that of the control group. However in the injection group, the overall expression trend was up-regulated and then down-regulated, which was significantly higher than that of the control group at 4h, and the highest transcript peak appeared at 48h, which was 2.25 times that of the control group. In gill tissue, the overall expression level rose, declined and rose. After 4 hours, the expression level gradually increased, and it was significantly higher than that of the control group at 24 hours, reaching the first small peak of expression level, which was 2.34 times that of the control group. The maximum expression was reached at 7d, which was 2.6 times that of the control group. In the injection group, the expression of CD28 in gills was significantly upregulated at 7d compared with the control group, and the transcript levels at the rest of the time were not significantly different from the control group. In the spleen, the expression trend of CD28 in the immersion group was similar to that in the gill, and the overall expression in the spleen showed a rising, falling and rebounding performance, and the transcript amount gradually increased after 4h. The first small peak of transcript amount appeared at 24h, which was 2.29 times that of the control group, and reached the maximum expression amount at 7d, which was 2.96 times that of the control group. In the injection group, the expression of CD28 in the spleen showed an overall phenomenum of increase and then decrease, reaching a maximum transcript level at 24h that was 1.9 times that of the control group.
IL-1β Expression in Liver, Kidney, Gills and Spleen
The transcript levels of IL-1β in the liver and kidney of the immersion group were significantly lower than those of the control group, while the overall trend of IL-1β expression in the liver of the injection group showed an increase and then down-regulation, reaching the highest value at 8 h, which was 15.19 times that of the control group, and then showed a down-regulation trend to 2.36 times the expression of the control group at 7d. The expression trend of IL-1β in the kidney of the injected group showed a general trend of increasing and then decreasing, and the expression of IL-1β reached the highest value at 48h, which was 3.1 times that of the control group, and then decreased to 1.68 times that of the control group at 7d. In gill tissues, two expression peaks of IL-1β were observed in the immersion group, at 0h and 7d, with transcripts 11.99 and 6.6 times that of the control group. However in the injection group, the transcript amount of IL-1β was highest at 4h, reaching 10.13 times that of the control group. After that, the expression was down-regulated and reached the highest value at 96h, which was 14.7 times that of the control group. In the spleen, the transcripts of IL-1β in the immersion group were significantly lower than those in the control group until 96h. The expression was highest at 7d, which was 6.73 times that of the control group. However the expression of IL-1β in the injection group showed an overall trend of rising and then down-regulating, with two swings to a peak at 4h and 24h in 9 time points, which were 3.6 and 2.56 times those of the control group, respectively, after which the expression decreased.
TNF-α Expression in Liver, Kidney, Gills and Spleen
The expression of TNF-α in the liver, kidney, gill and spleen of the soaking group was significantly higher than that of the control group at 0h. In the liver, the expression of TNF-α in the soaking group showed a trend of up-regulation followed by down-regulation from 4h-7d, and was significantly higher than that in the control group at 12h, reaching the highest value at 48h, which was 2.14 times that of the control group, and then decreased to 7d when there was no significant difference with the expression in the control group. However, in the injection group, the peak of TNF-α transcription appeared at 4h, 12h and 7d, respectively. The transcription level at 4h was significantly higher than that in the control group, and the peak of TNF-α expression appeared at 12h, which was 7.41 times that of the control group. In the kidney, the expression of TNF-α in the soaking group showed a downward trend from 4h to 7d, and the highest expression level appeared at 24h, which was 3.28 times that of the control group. After that, the expression level was down-regulated, and there was basically no difference between the soaking group and the control group at 7days. However, the expression of TNF-α gene in injection group reached the first small peak at 8 hours, which was 4.47 times that of control group, and then the expression decreased first and then increased, and the transcription reached the peak at 48 hours, which was 5.91 times that of control group. In gill, the transcription of TNF-α in soaking group increased obviously at 24 hours, and the maximum transcription reached at 72 hours was 2.37 times that of control group. However the expression of TNF-α gene in the injection group showed a maximum at 4h that was 3.3 times that of the control group, and the expression at the subsequent time points was one time that of the control group. In the spleen, TNF-α transcripts were significantly higher in the soaking group than in the control group at 24h. The maximum transcript level appeared at 7d, which was 9.09 times that of the control group. The TNF-α transcript level in the injection group showed an overall trend of increasing and then decreasing, and its maximum transcript level appeared at 24h, which was 2.72 times higher than that of the control group, and then slowly decreased to a significantly lower expression than that of the control group.