A. baumannii is one of the main causative agents of healthcare-associated infections worldwide [10]. Currently, the information regarding the clinical and molecular characterization of carbapenem-resistant A. baumannii infections in the pediatric population is scarce [11, 12]. A high prevalence of the neonatal population (44.8%) was described in our study, with ventilator-associated pneumonia being most frequent type of infection (48.9%), and a high rate of MDR-resistant isolates (48.9%). Interestingly, A. baumannii isolates co-harboring blaOXA−24, and blaIMP genes were detected in 48% of cases.
The issue of CRAB infections in neonates has primarily been studied in the context of outbreaks in intensive care units, and there is limited information available regarding active epidemiological surveillance. In our study, the neonatal population had the highest incidence of infections, accounting for 62% of cases. The case fatality rate was 36.7%, although half of the deaths were reported in neonates. This mortality is similar to that observed in previous outbreaks in neonatal intensive care units, which ranged from 30.8%-42.9% [13].
The prevalence of CRAB poses a significant threat to public health, as per the data published by the European Center for Disease Prevention and Control for the 2020–2021 period, which showed a sharp increase of 121% in CRAB infections [14]. A recent study in Turkey on children demonstrated a rise in the prevalence of CRAB from 95–100% between 2015 and 2016. In all cases, co-resistance to cephalosporins and quinolones was observed, while 3.8% of the cases documented the emergence of colistin resistance [15]. In the United States, the proportion of CRAB in children escalated from 0.6% in 1999 to 6.1% in 2012 [16]. Similarly, in Latin America, a study conducted in Bolivia reported a high incidence of CRAB (90%) with a co-resistance of over 80% for all groups of antibiotics [17].
There is limited information available on the epidemiology of A. baumannii in Mexico. A multicenter study conducted in the adult population reported a prevalence of carbapenem resistance of more than 80%, with an alarming increase in co-resistance to cefepime (83.6%) [18]. Another study showed a significant increase in A. baumannii cases in intensive care units from 18 cases in 1999 to over 500 in 2010. This was accompanied by a decrease in carbapenem susceptibility from 91.7–11.8% [4]. In the pediatric population, a study of 54 cases reported a prevalence of carbapenem resistance of 21%, and co-resistance to amikacin, and trimethoprim/sulfamethoxazole of 29% and 33% respectively [12]. In comparison to these reports, our populations exhibit similar rates of co-resistance to most of the groups of antibiotics, with a colistin resistance of 4%.
Class D carbapenemases genes corresponding to oxacillinases are highly prevalent within Acinetobacter species. These genes are categorized into six groups: blaOXA−51−like, blaOXA−23−like, blaOXA−24/40−like, blaOXA−58−like, blaOXA−143−like and blaOXA−235−like. Among these groups, the presence of blaOXA−51 is naturally present in A. baumannii strains. The distribution of the different types of oxacillinases differs by region. In Europe, a multinational study showed an endemic prevalence of blaOXA−23 and blaOXA−72 [19]. In Brazil, blaOXA−23 accounts 51.2–97.9% of isolates, in comparison to 64.4% in Argentina [20–22]. In Mexico, a multicenter study conducted on the adult population described a prevalence of blaOXA−40, and blaOXA−23 of 60.4%, and 23.2%, respectively. Other national studies report a high prevalence of blaOXA−72 (49.6%), and blaOXA−58 (28.3%) [23, 24].
There is a lack of information regarding the molecular characterization of CRAB infections in children (25–26). Chen et al. (9) reported that blaOXA−23 was present in 90.7% of cases, followed by blaOXA−24 (23.3%), and blaOXA−58 (22.1%). In Turkey, blaOXA−23 (31%) and blaOXA−58 (11%) were the most prevalent carbapenemase genes [25]. In Bolivia, the presence of blaOXA−23 was detected in all CRAB cases in children [17], while in Mexico, blaOXA−23 was identified in all cases in a study of five patients in Puebla, and in 51.13% of cases in another study from Mexico City, along with blaOXA−24 (4.54%), and blaOXA−58 (2.27%) [27, 28]. Notably, co-harboring genes were not observed in these studies. Our study found that 92% of CRAB cases carried blaOXA−24, while blaOXA−23, and blaOXA−58 were not detected. This highlights the importance of increasing epidemiological reports on the molecular characterization of CRAB in children, especially considering regional variations within the same country.
The occurrence of class B carbapenemases genes in A. baumannii is relatively low, as noted in previous studies [29, 30]. Lukovic et al. [29] reported a prevalence of blaNDM of 3%. In another study, blaNDM was reported as the sole carbapenemase gene in 22% of CRAB cases, while co-harboring with class D carbapenemase genes, blaOXA−24, and blaOXA−58, was identified in 6% and 3% of cases, respectively. Although blaIMP−1 was not detected alone, it was co-detected with blaOXA−58 and blaOXA−23 in 7% and 2% of cases, respectively. In Mexico, Alcántar-Curiel et al [24] reported a high prevalence of 78.3% A. baumannii with the class B phenotype, but only 1.2% were identified with blaVIM−1, while the remaining cases were linked to class D carbapenemases. In contrast, our study showed a high prevalence of blaIMP (48%); however, all blaIMP genes were co-detected with blaOXA−24. Our study highlights the first occurrence of co-detection of class B and D carbapenemase genes in children from Latin America and reports the highest prevalence of carbapenemase class B genes in this population.