Table 1: Predicted miRNAs targeting the submitted 29903 bp ss-RNA SARS-COV-2 genome, accession number NC_045512.2
Table 2: Predicted targets function for hsa-miR-4288 on 29903 bp ss-RNA SARS-COV-2 genome
Target Rank
|
Target Score
|
miRNA Name
|
Gene Symbol
|
Gene Description
|
1
|
97
|
hsa-miR-4288
|
UIMC1
|
ubiquitin interaction motif containing 1
|
2
|
97
|
hsa-miR-4288
|
CC2D1A
|
coiled-coil and C2 domain containing 1A
|
3
|
96
|
hsa-miR-4288
|
ING3
|
inhibitor of growth family member 3
|
4
|
96
|
hsa-miR-4288
|
KCMF1
|
potassium channel modulatory factor 1
|
5
|
96
|
hsa-miR-4288
|
CAPZB
|
capping actin protein of muscle Z-line subunit beta
|
6
|
96
|
hsa-miR-4288
|
BCL11A
|
BCL11A, BAF complex component
|
7
|
96
|
hsa-miR-4288
|
AMELX
|
amelogenin X-linked
|
8
|
96
|
hsa-miR-4288
|
NTM
|
neurotrimin
|
9
|
95
|
hsa-miR-4288
|
LRRC4C
|
leucine rich repeat containing 4C
|
10
|
95
|
hsa-miR-4288
|
PSIP1
|
PC4 and SFRS1 interacting protein 1
|
Table 3: Predicted targets function for hsa-miR-195-5p on 29903 bp ss-RNA SARS-COV-2 genome
Target Rank
|
Target Score
|
miRNA Name
|
Gene Symbol
|
Gene Description
|
1
|
100
|
hsa-miR-195-5p
|
PAPPA
|
pappalysin 1
|
2
|
100
|
hsa-miR-195-5p
|
FASN
|
fatty acid synthase
|
3
|
100
|
hsa-miR-195-5p
|
UNC80
|
unc-80 homolog, NALCN channel complex subunit
|
4
|
100
|
hsa-miR-195-5p
|
FGF2
|
fibroblast growth factor 2
|
5
|
100
|
hsa-miR-195-5p
|
TNRC6B
|
trinucleotide repeat containing 6B
|
6
|
100
|
hsa-miR-195-5p
|
PTPN4
|
protein tyrosine phosphatase, non-receptor type 4
|
7
|
100
|
hsa-miR-195-5p
|
PHF19
|
PHD finger protein 19
|
8
|
100
|
hsa-miR-195-5p
|
DESI1
|
desumoylating isopeptidase 1
|
9
|
99
|
hsa-miR-195-5p
|
UBE2Q1
|
ubiquitin conjugating enzyme E2 Q1
|
10
|
99
|
hsa-miR-195-5p
|
LSM11
|
LSM11, U7 small nuclear RNA associated
|
Table 4: Predicted targets function for hsa-miR-16-5p on 29903 bp ss-RNA SARS-COV-2 genome
Target Rank
|
Target Score
|
miRNA Name
|
Gene Symbol
|
Gene Description
|
1
|
100
|
hsa-miR-16-5p
|
PAPPA
|
pappalysin 1
|
2
|
100
|
hsa-miR-16-5p
|
FASN
|
fatty acid synthase
|
3
|
100
|
hsa-miR-16-5p
|
UNC80
|
unc-80 homolog, NALCN channel complex subunit
|
4
|
100
|
hsa-miR-16-5p
|
FGF2
|
fibroblast growth factor 2
|
5
|
100
|
hsa-miR-16-5p
|
TNRC6B
|
trinucleotide repeat containing 6B
|
6
|
100
|
hsa-miR-16-5p
|
PTPN4
|
protein tyrosine phosphatase, non-receptor type 4
|
7
|
100
|
hsa-miR-16-5p
|
PHF19
|
PHD finger protein 19
|
8
|
100
|
hsa-miR-16-5p
|
DESI1
|
desumoylating isopeptidase 1
|
9
|
99
|
hsa-miR-16-5p
|
UBE2Q1
|
ubiquitin conjugating enzyme E2 Q1
|
10
|
99
|
hsa-miR-16-5p
|
LSM11
|
LSM11, U7 small nuclear RNA associated
|
Table 5: Predicted targets function for hsa-miR-15b-5p on 29903 bp ss-RNA SARS-COV-2 genome
Target Rank
|
Target Score
|
miRNA Name
|
Gene Symbol
|
Gene Description
|
1
|
100
|
hsa-miR-15b-5p
|
PAPPA
|
pappalysin 1
|
2
|
100
|
hsa-miR-15b-5p
|
FASN
|
fatty acid synthase
|
3
|
100
|
hsa-miR-15b-5p
|
UNC80
|
unc-80 homolog, NALCN channel complex subunit
|
4
|
100
|
hsa-miR-15b-5p
|
FGF2
|
fibroblast growth factor 2
|
5
|
100
|
hsa-miR-15b-5p
|
TNRC6B
|
trinucleotide repeat containing 6B
|
6
|
100
|
hsa-miR-15b-5p
|
PTPN4
|
protein tyrosine phosphatase, non-receptor type 4
|
7
|
100
|
hsa-miR-15b-5p
|
PHF19
|
PHD finger protein 19
|
8
|
100
|
hsa-miR-15b-5p
|
DESI1
|
desumoylating isopeptidase 1
|
9
|
99
|
hsa-miR-15b-5p
|
UBE2Q1
|
ubiquitin conjugating enzyme E2 Q1
|
10
|
99
|
hsa-miR-15b-5p
|
LSM11
|
LSM11, U7 small nuclear RNA associated
|
Table 6: Predicted targets function for hsa-miR-15a-5p on 29903 bp ss-RNA SARS-COV-2 genome
Target Rank
|
Target Score
|
miRNA Name
|
Gene Symbol
|
Gene Description
|
1
|
100
|
hsa-miR-15a-5p
|
PAPPA
|
pappalysin 1
|
2
|
100
|
hsa-miR-15a-5p
|
FASN
|
fatty acid synthase
|
3
|
100
|
hsa-miR-15a-5p
|
UNC80
|
unc-80 homolog, NALCN channel complex subunit
|
4
|
100
|
hsa-miR-15a-5p
|
FGF2
|
fibroblast growth factor 2
|
5
|
100
|
hsa-miR-15a-5p
|
TNRC6B
|
trinucleotide repeat containing 6B
|
6
|
100
|
hsa-miR-15a-5p
|
PTPN4
|
protein tyrosine phosphatase, non-receptor type 4
|
7
|
100
|
hsa-miR-15a-5p
|
PHF19
|
PHD finger protein 19
|
8
|
100
|
hsa-miR-15a-5p
|
DESI1
|
desumoylating isopeptidase 1
|
9
|
99
|
hsa-miR-15a-5p
|
UBE2Q1
|
ubiquitin conjugating enzyme E2 Q1
|
10
|
99
|
hsa-miR-15a-5p
|
LSM11
|
LSM11, U7 small nuclear RNA associated
|
Table 7: Predicted targets function for hsa-miR-6838-5p on 29903 bp ss-RNA SARS-COV-2 genome
Target Rank
|
Target Score
|
miRNA Name
|
Gene Symbol
|
Gene Description
|
1
|
100
|
hsa-miR-6838-5p
|
PAPPA
|
pappalysin 1
|
2
|
100
|
hsa-miR-6838-5p
|
FASN
|
fatty acid synthase
|
3
|
100
|
hsa-miR-6838-5p
|
UNC80
|
unc-80 homolog, NALCN channel complex subunit
|
4
|
100
|
hsa-miR-6838-5p
|
FGF2
|
fibroblast growth factor 2
|
5
|
100
|
hsa-miR-6838-5p
|
TNRC6B
|
trinucleotide repeat containing 6B
|
6
|
100
|
hsa-miR-6838-5p
|
PTPN4
|
protein tyrosine phosphatase, non-receptor type 4
|
7
|
100
|
hsa-miR-6838-5p
|
PHF19
|
PHD finger protein 19
|
8
|
99
|
hsa-miR-6838-5p
|
UBE2Q1
|
ubiquitin-conjugating enzyme E2 Q1
|
9
|
99
|
hsa-miR-6838-5p
|
LSM11
|
LSM11, U7 small nuclear RNA associated
|
10
|
99
|
hsa-miR-6838-5p
|
ANKUB1
|
ankyrin repeat and ubiquitin domain containing 1
|
Table 8: Predicted targets function for hsa-miR-497-5p on 29903 bp ss-RNA SARS-COV-2 genome.
Target Rank
|
Target Score
|
miRNA Name
|
Gene Symbol
|
Gene Description
|
1
|
100
|
hsa-miR-497-5p
|
PAPPA
|
pappalysin 1
|
2
|
100
|
hsa-miR-497-5p
|
FASN
|
fatty acid synthase
|
3
|
100
|
hsa-miR-497-5p
|
UNC80
|
unc-80 homolog, NALCN channel complex subunit
|
4
|
100
|
hsa-miR-497-5p
|
FGF2
|
fibroblast growth factor 2
|
5
|
100
|
hsa-miR-497-5p
|
TNRC6B
|
trinucleotide repeat containing 6B
|
6
|
100
|
hsa-miR-497-5p
|
PTPN4
|
protein tyrosine phosphatase, non-receptor type 4
|
7
|
100
|
hsa-miR-497-5p
|
PHF19
|
PHD finger protein 19
|
8
|
99
|
hsa-miR-497-5p
|
UBE2Q1
|
ubiquitin conjugating enzyme E2 Q1
|
9
|
99
|
hsa-miR-497-5p
|
LSM11
|
LSM11, U7 small nuclear RNA associated
|
10
|
99
|
hsa-miR-497-5p
|
ANKUB1
|
ankyrin repeat and ubiquitin domain containing 1
|
Table 9: Predicted targets function for hsa-miR-424-5p on 29903 bp ss-RNA SARS-COV-2 genome.
Target Rank
|
Target Score
|
miRNA Name
|
Gene Symbol
|
Gene Description
|
1
|
100
|
hsa-miR-424-5p
|
PAPPA
|
pappalysin 1
|
2
|
100
|
hsa-miR-424-5p
|
FASN
|
fatty acid synthase
|
3
|
100
|
hsa-miR-424-5p
|
UNC80
|
unc-80 homolog, NALCN channel complex subunit
|
4
|
100
|
hsa-miR-424-5p
|
FGF2
|
fibroblast growth factor 2
|
5
|
100
|
hsa-miR-424-5p
|
TNRC6B
|
trinucleotide repeat containing 6B
|
6
|
100
|
hsa-miR-424-5p
|
PTPN4
|
protein tyrosine phosphatase, non-receptor type 4
|
7
|
100
|
hsa-miR-424-5p
|
PHF19
|
PHD finger protein 19
|
8
|
99
|
hsa-miR-424-5p
|
UBE2Q1
|
ubiquitin-conjugating enzyme E2 Q1
|
9
|
99
|
hsa-miR-424-5p
|
LSM11
|
LSM11, U7 small nuclear RNA associated
|
10
|
99
|
hsa-miR-424-5p
|
ANKUB1
|
ankyrin repeat and ubiquitin domain containing 1
|
Table 10: Predicted targets function for hsa-miR-3133 on 29903 bp ss-RNA SARS-COV-2 genome.
Target Rank
|
Target Score
|
miRNA Name
|
Gene Symbol
|
Gene Description
|
1
|
100
|
hsa-miR-3133
|
HOOK3
|
hook microtubule tethering protein 3
|
2
|
100
|
hsa-miR-3133
|
RIMS2
|
regulating synaptic membrane exocytosis 2
|
3
|
100
|
hsa-miR-3133
|
TGFBRAP1
|
transforming growth factor-beta receptor-associated protein 1
|
4
|
99
|
hsa-miR-3133
|
RPRD1A
|
regulation of nuclear pre-mRNA domain-containing 1A
|
5
|
99
|
hsa-miR-3133
|
TFAP2B
|
transcription factor AP-2 beta
|
6
|
99
|
hsa-miR-3133
|
PTPRK
|
protein tyrosine phosphatase, receptor type K
|
7
|
99
|
hsa-miR-3133
|
MAP2
|
microtubule-associated protein 2
|
8
|
99
|
hsa-miR-3133
|
NRF1
|
nuclear respiratory factor 1
|
9
|
99
|
hsa-miR-3133
|
KAT6A
|
lysine acetyltransferase 6A
|
10
|
99
|
hsa-miR-3133
|
URI1
|
URI1, prefoldin like chaperone
|
Table 11: Predicted targets function for hsa-miR-21-3p on 29903 bp ss-RNA SARS-COV-2 genome.
Target Rank
|
Target Score
|
miRNA Name
|
Gene Symbol
|
Gene Description
|
1
|
99
|
hsa-miR-21-3p
|
STK38L
|
serine/threonine kinase 38 like
|
2
|
98
|
hsa-miR-21-3p
|
PCDH19
|
protocadherin 19
|
3
|
96
|
hsa-miR-21-3p
|
LAMP1
|
lysosomal associated membrane protein 1
|
4
|
96
|
hsa-miR-21-3p
|
GRIA2
|
glutamate ionotropic receptor AMPA type subunit 2
|
5
|
96
|
hsa-miR-21-3p
|
TOGARAM1
|
TOG array regulator of axonemal microtubules 1
|
6
|
96
|
hsa-miR-21-3p
|
ATP1B1
|
ATPase Na+/K+ transporting subunit beta 1
|
7
|
96
|
hsa-miR-21-3p
|
TSC22D2
|
TSC22 domain family member 2
|
8
|
96
|
hsa-miR-21-3p
|
NAP1L5
|
nucleosome assembly protein 1 like 5
|
9
|
95
|
hsa-miR-21-3p
|
UBE4B
|
ubiquitination factor E4B
|
10
|
95
|
hsa-miR-21-3p
|
ZNF326
|
zinc finger protein 326
|
Table 12: Predicted miRNAs targeting region on 29903 nt SARS-COV-2 complete genome
Severe acute respiratory syndrome coronavirus 2 (SARS-COV-2 sequence) isolate Wuhan-Hu-1, complete genome
NCBI Reference Sequence: NC_045512.2
|
miRNAs targeting the submitted 29903 nt SARS-COV-2 complete genome
|
181 ttctgcaggc tgcttacggt ttcgtccgtg ttgcagccga tcatcagcac atctaggttt
241 cgtccgggtg tgaccgaaag gtaagatgga gagccttgtc cctggtttca acgagaaaac
|
miRNA Name
|
hsa-miR-15b-5p
|
|
Previous Name
|
hsa-miR-15b
|
|
miRNA Sequence
|
5' - uagcagcacaucaugguuuaca - 3'
(length = 22)
|
|
miRNA Name
|
hsa-miR-497-5p
|
Previous Name
|
hsa-miR-497
|
miRNA Sequence
|
5' - cagcagcacacugugguuugu - 3'
(length = 21)
|
|
4441 tgtggaaact aaagccatag tttcaactat acagcgtaaa tataagggta ttaaaataca
|
miRNA Name
|
hsa-miR-16-5p
|
Previous Name
|
hsa-miR-16
|
miRNA Sequence
|
5' - uagcagcacguaaauauuggcg - 3'
(length = 22)
|
|
6361 cgcgcaggga atggataatc ttgcctgcga agatctaaaa ccagtctctg aagaagtagt
6421 ggaaaatcct accatacaga aagacgttct tgagtgtaat gtgaaaacta ccgaagttgt
|
miRNA Name
|
hsa-miR-6838-5p
|
miRNA Sequence
|
5' - aagcagcaguggcaagacuccu - 3'
(length = 22)
|
|
8821 attgattgct gcagtcataa caagagaagt gggttttgtc gtgcctggtt tgcctggcac
|
miRNA Name
|
hsa-miR-4288
|
miRNA Sequence
|
5' - uugucugcugaguuucc - 3'
(length = 17)
|
|
12421 aagagatggt tgtgttccct tgaacataat acctcttaca acagcagcca aactaatggt
12481 tgtcatacca gactataaca catataaaaa tacgtgtgat ggtacaacat ttacttatgc
|
miRNA Name
|
hsa-miR-497-5p
|
Previous Name
|
hsa-miR-497
|
miRNA Sequence
|
5' - cagcagcacacugugguuugu - 3'
(length = 21)
|
|
14221 ttaacaaagc cttacattaa gtgggatttg ttaaaatatg acttcacgga agagaggtta
14281 aaactctttg accgttattt taaatattgg gatcagacat accacccaaa ttgtgttaac
|
miRNA Name
|
hsa-miR-15a-5p
|
Previous Name
|
hsa-miR-15a
|
miRNA Sequence
|
5' - uagcagcacauaaugguuugug - 3' (length = 22)
|
|
20161 aaagttgatg gtgttgtcca acaattacct gaaacttact ttactcagag tagaaattta
20221 caagaattta aacccaggag tcaaatggaa attgatttct tagaattagc tatggatgaa
|
miRNA Name
|
hsa-miR-3133
|
miRNA Sequence
|
5' - uaaagaacucuuaaaacccaau - 3'
(length = 22)
|
|
21301 ccacgcgaac aaatagatgg ttatgtcatg catgcaaatt acatattttg gaggaataca
|
miRNA Name
|
hsa-miR-424-5p
|
Previous Name
|
hsa-miR-424
|
miRNA Sequence
|
5' - cagcagcaauucauguuuugaa - 3'
(length = 22)
|
|
24841 tgtctttgtt tcaaatggca cacactggtt tgtaacacaa aggaattttt atgaaccaca
|
miRNA Name
|
hsa-miR-497-5p
|
Previous Name
|
hsa-miR-497
|
miRNA Sequence
|
5' - cagcagcacacugugguuugu - 3'
(length = 21)
|
|
28501 caatagcagt ccagatgacc aaattggcta ctaccgaaga gctaccagac gaattcgtgg
|
miRNA Name
|
hsa-miR-195-5p
|
Previous Name
|
hsa-miR-195
|
miRNA Sequence
|
5' - uagcagcacagaaauauuggc – 3'
(length = 21)
|
|
29521 aactcaggcc taaactcatg cagaccacac aaggcagatg ggctatataa acgttttcgc
|
miRNA Name
|
hsa-miR-21-3p
|
Previous Name
|
hsa-miR-21*
|
miRNA Sequence
|
5' - caacaccagucgaugggcugu - 3'
(length = 21)
|
|
Table 13: Predicted miRNAs targeting the submitted 3822 bp ss-RNA spike glycoprotein of SARS-COV-2 sequence, accession number NC_045512.2 REGION: 21563-25384.
Table 14: Predicted targets function for hsa-miR-510-3p on 3822 bp ss-RNA spike glycoprotein of SARS-COV-2 sequence, accession number NC_045512.2 REGION: 21563-25384.
Target Rank
|
Target Score
|
miRNA Name
|
Gene Symbol
|
Gene Description
|
1
|
100
|
hsa-miR-510-3p
|
CNOT6
|
CCR4-NOT transcription complex subunit 6
|
2
|
99
|
hsa-miR-510-3p
|
NEXMIF
|
neurite extension and migration factor
|
3
|
99
|
hsa-miR-510-3p
|
RBMS3
|
RNA binding motif single stranded interacting protein 3
|
4
|
99
|
hsa-miR-510-3p
|
DENND6A
|
DENN domain containing 6A
|
5
|
99
|
hsa-miR-510-3p
|
SNAP91
|
synaptosome associated protein 91
|
6
|
99
|
hsa-miR-510-3p
|
BCLAF1
|
BCL2 associated transcription factor 1
|
7
|
99
|
hsa-miR-510-3p
|
LATS2
|
large tumor suppressor kinase 2
|
8
|
99
|
hsa-miR-510-3p
|
ELOVL7
|
ELOVL fatty acid elongase 7
|
9
|
98
|
hsa-miR-510-3p
|
ZFHX3
|
zinc finger homeobox 3
|
10
|
98
|
hsa-miR-510-3p
|
FMR1
|
fragile X mental retardation 1
|
Table 15: Predicted targets function for hsa-miR-624-5p on 3822 bp ss-RNA spike glycoprotein of SARS-COV-2 sequence, accession number NC_045512.2 REGION: 21563-25384.
Target Rank
|
Target Score
|
miRNA Name
|
Gene Symbol
|
Gene Description
|
1
|
96
|
hsa-miR-624-5p
|
ARL4A
|
ADP ribosylation factor like GTPase 4A
|
2
|
96
|
hsa-miR-624-5p
|
SOWAHC
|
sosondowah ankyrin repeat domain family member C
|
3
|
95
|
hsa-miR-624-5p
|
SYT1
|
synaptotagmin 1
|
4
|
95
|
hsa-miR-624-5p
|
CLOCK
|
clock circadian regulator
|
5
|
95
|
hsa-miR-624-5p
|
STK38
|
serine/threonine kinase 38
|
6
|
95
|
hsa-miR-624-5p
|
LCP1
|
lymphocyte cytosolic protein 1
|
7
|
95
|
hsa-miR-624-5p
|
ZNF800
|
zinc finger protein 800
|
8
|
95
|
hsa-miR-624-5p
|
DOCK11
|
dedicator of cytokinesis 11
|
9
|
94
|
hsa-miR-624-5p
|
UAP1
|
UDP-N-acetylglucosamine pyrophosphorylase 1
|
10
|
94
|
hsa-miR-624-5p
|
NFKBIA
|
NFKB inhibitor alpha
|
Table 16: Predicted miRNAs targeting region on 3822 bp ss-RNA spike glycoprotein of SARS-COV-2 sequence
3822 bp ss-RNA spike glycoprotein of SARS-COV-2 sequence isolate Wuhan-Hu-1, complete genome NCBI Reference Sequence: NC_045512.2
|
miRNAs targeting the submitted 3822 bp ss-RNA spike glycoprotein of SARS-COV-2 sequence
|
1 atgtttgttt ttcttgtttt attgccacta gtctctagtc agtgtgttaa tcttacaacc
|
miRNA Name
|
hsa-miR-624-5p
|
Previous Name
|
hsa-miR-624;hsa-miR-624*
|
miRNA Sequence
|
5' - uaguaccaguaccuuguguuca - 3' (length = 22)
|
|
2821 acagcaagtg cacttggaaa acttcaagat gtggtcaacc aaaatgcaca agctttaaac
|
miRNA Name
|
hsa-miR-510-3p
|
miRNA Sequence
|
5' - auugaaaccucuaagagugga - 3' (length = 21)
|
|
3241 atttgtcatg atggaaaagc acactttcct cgtgaaggtg tctttgtttc aaatggcaca
3301 cactggtttg taacacaaag gaatttttat gaaccacaaa tcattactac agacaacaca
|
miRNA Name
|
hsa-miR-497-5p
|
Previous Name
|
hsa-miR-497
|
miRNA Sequence
|
5' - cagcagcacacugugguuugu - 3' (length = 21)
|
|
3661 atagctggct tgattgccat agtaatggtg acaattatgc tttgctgtat gaccagttgc
3721 tgtagttgtc tcaagggctg ttgttcttgt ggatcctgct gcaaatttga tgaagacgac
|
miRNA Name
|
hsa-miR-624-5p
|
Previous Name
|
hsa-miR-624;hsa-miR-624*
|
miRNA Sequence
|
5' - uaguaccaguaccuuguguuca - 3' (length = 22)
|
|
Table 17: Original and del 432 TTAdel. Y144 have the same miRNA and target score
Table 18: Original 1841 A target miRNA score
Table 19: 1841A>G D614G showed a change in the sequence of the miRNA and increase in the target score from 90 to 91 on variable ss-RNA spike glycoprotein of SARS-COV-2 sequence from Jordanian samples
Table 20: Original 3415G target miRNA score
Table 21: 3415G>T D1139Y show same the miRNA and increase the target score 80 to 81 on variation ss-RNA spike glycoprotein of SARS-COV-2 sequence from Jordanian samples
Table 22: Original 3499 G target miRNA score.
Table 23: 3499 G>A G1167S show same the miRNA and decrease the target score 73 to 72 on variation ss-RNA spike glycoprotein of SARS-COV-2 sequence from Jordanian samples
Table 24: Predicted miRNAs targeting region on variation ss-RNA spike glycoprotein of SARS-COV-2 sequence from Jordanian samples
Sample number with accision on GISAID
|
Sequence variation ss-RNA spike glycoprotein of SARS-COV-2 sequence
|
Single Amino Acid Variation
|
miRNAs targeting the submitted variation ss-RNA spike glycoprotein of SARS-COV-2 sequence
|
NCBI Reference Sequence: NC_045512.2
|
AATAACGCTACTAATGTTGTTATTAAATCTGTGAATTTCAATTTTGTAATGATCCATTTTTGGGTGTTTATTACCAAAAAACAACAAAAGTTGGATGGAAAGT
|
original
|
miRNA Name hsa-miR-196a-1-3p
miRNA Sequence 5' - caacaacauuaaaccacccga - 3'
(length = 21)
|
Sample 23:
hCoV-19/Jordan/SR-042/2020|EPI_ISL_430000|2020-03-30
|
AATAACGCTACTAATGTTGTTATTAAATCTGTGAATTTCAATTTTGTAATGATCCATTTTTGGGTGTTTACCAAAAAACAACAAAAGTTGGATGGAAAGT
|
del 432 TTA
del. Y144
|
miRNA Name hsa-miR-196a-1-3p
miRNA Sequence 5' - caacaacauuaaaccacccga - 3'
(length = 21)
|
NCBI Reference Sequence: NC_045512.2
|
GGAACAAATACTTCTAACCAGGTTGCTGTTCTTTATCAGGATGTTAACTGCACAGAAGTCCCTGTTGCTATTCATGCAGATCAACTTACTCCTACTTGGCGTGT
|
Original 1841A
|
miRNA Name hsa-miR-4793-5p
miRNA Sequence 5' - acauccugcuccacagggcagagg - 3' (length = 24)
|
Sample 3,5,7,8,9,10,11,12,13,15,18,20 and21
Example:
hCoV-19/Jordan/SR-036/2020|EPI_ISL_429996|2020-03-23
|
GGAACAAATACTTCTAACCAGGTTGCTGTTCTTTATCAGGGTGTTAACTGCACAGAAGTCCCTGTTGCTATTCATGCAGATCAACTTACTCCTACTTGGCGTGT
|
1841A>G
D614G
|
miRNA Name hsa-miR-3620-3p
Previous Name hsa-miR-3620
miRNA Sequence 5' - ucacccugcaucccgcacccag - 3' (length = 22)
|
NCBI Reference Sequence: NC_045512.2
|
ACTGTGATGTTGTAATAGGAATTGTCAACAACACAGTTTATGATCCTTTGCAACCTGAATTAGACTCATTCAAGGAGGAGTTAGATAAATATTTTAAGAATCATACA
|
Original 3415G
|
miRNA Name hsa-miR-548g-3p
Previous Name hsa-miR-548g
miRNA Sequence 5' - aaaacuguaauuacuuuuguac - 3' (length = 22)
|
Sample 21:
hCoV-19/Jordan/SR-033/2020|EPI_ISL_429993|2020-03-16
|
ACTGTGATGTTGTAATAGGAATTGTCAACAACACAGTTTATTATCCTTTGCAACCTGAATTAGACTCATTCAAGGAGGAGTTAGATAAATATTTTAAGAATCATACA
|
3415G>T
D1139Y
|
miRNA Name hsa-miR-548g-3p
Previous Name hsa-miR-548g
miRNA Sequence 5' - aaaacuguaauuacuuuuguac - 3' (length = 22)
|
NCBI Reference Sequence: NC_045512.2
|
TCACCAGATGTTGATTTAGGTGACATCTCTGGCATTAATGCTTCAGTTGTAAACATTCAAAAAGAAATTGACCGCCTCAATGAGGTTGCCAAGAATTTAAATG
|
Original 3499 G
|
miRNA Name hsa-miR-155-5p
Previous Name hsa-miR-155
miRNA Sequence 5' - uuaaugcuaaucgugauagggguu - 3' (length = 24)
|
Sample 16:
hCoV-19/Jordan/SR-039/2020|EPI_ISL_429998|2020-03-28
|
TCACCAGATGTTGATTTAAGTGACATCTCTGGCATTAATGCTTCAGTTGTAAACATTCAAAAAGAAATTGACCGCCTCAATGAGGTTGCCAAGAATTTAAATG
|
3499 G>A
G1167S
|
miRNA Name hsa-miR-155-5p
Previous Name hsa-miR-155
miRNA Sequence 5' - uuaaugcuaaucgugauagggguu - 3' (length = 24)
|