2.1 Ethical approval
The study protocol was approved by the Ethics Committee of the Second Affiliated Hospital of Harbin Medical University (Harbin, China). All animal experimental procedures were conducted following the administrative acts for experimental animals in China, and performed by the same operation team.
2.2 Animal experiment
Sixteen adult male New Zealand White rabbits (2.5-3.5 kg, 3-4 months) were assigned to receive sirolimus-eluting stent (Lepu Medical, Beijing, China) implantation into the iliac artery, according to a previously published protocol (G. Wang et al. 2019). The animals were excluded if the animal died prematurely, preventing the collection of behavioral and histological data. However, all of the 16 rabbits were included as they underwent successful DES implantation. The implanted stent size was 3 mm×15 mm. Subsequently, 8 rabbits were randomly sampled and fed a high cholesterol diet (HCD) containing 1% cholesterol for 8 weeks until euthanasia, while the other 8 rabbits were fed a normal diet and defined as the control group. An independent investigator (SF) administered the diet treatment based on the randomization table. This investigator was the only person aware of the treatment group allocation. A second investigator (HL, YF) was responsible for the following OCT imaging, whereas a third investigator (YY) performed histology analysis.
2.3 OCT imaging and analyses
At 8 weeks after stent placement and initiating the HCD diet, OCT was performed, and the stented segments were harvested for histomorphometric analysis to assess the progression of ISNA. OCT was carried out after administration of 100 μg of nitroglycerin using an OCT System (LightLab Imaging, Westford, MA, USA) with an imaging wire (crossing profile, 0.016 inches; LightLab Imaging). The OCT image wire was advanced to the distal end of the stent through a 3-F occlusion balloon catheter. The entire length of the stent and 5 mm from both stent ends were imaged with an automatic pullback device at a pullback speed of 2 mm/s during flushing with heparinized lactate Ringer’s solution through the guiding catheter to transiently displace blood. Cross-sectional OCT images were analyzed at 1-mm intervals. Mean neointimal thickness (NIT), stent area, and lumen area for each cross-sectional OCT image were semiautomatically calculated using OCT offline analysis software (LightLab Imaging, Westford, Massachusetts). NIT was measured from the luminal border to the inner border of the struts. The neointimal area (NA) was calculated as the stent area minus the lumen area. The restenosis rate was calculated as NA divided by stent area. As described previously, the stent was considered to have ISNA when lipid-laden neointima was present. The OCT feature of ISNA was defined as a signal poor region with a diffuse border inside the stent.
2.4 Stent harvest and histology analysis
Stents were harvested and cut into three 5-mm segments (distal, middle, and proximal). For light microscopy, specimens were embedded in methyl methacrylate resin, sectioned into 8 μm sections, and stained with hematoxylin-eosin (H&E) as previously described. ISNA was defined as peristrut foamy macrophage clusters with or without fibroatheromas and ruptures with thrombosis.
2.5 Sample collection and preparation
Blood samples were collected via the rabbit ear vein at two time points (baseline and 8 weeks after feeding with 1% HCD) and then gently shaken and centrifuged at 3000 r for 10 minutes to extract the serum supernatant. Then, each 50 μL of serum sample was extracted, weighted in a frozen EP tube, and immediately stored at -80 ℃ before metabolite extraction.
2.6 Metabolite extraction
First, the experimental order was randomized before metabolite extraction and LC-MS analyses. Subsequently, the EP tube was thawed at 4 ℃ on ice, vortexed for 30 s after the addition of 1000 μL of extract solvent (acetonitrile-methanol-water, 2:2:1), sonicated for 10 min in an ice-water bath, and incubated for 1 h at -20 ℃ to precipitate proteins. Then, the sample tubes were centrifuged at 12000 rpm for 15 min at 4 ℃, and the supernatants were transferred to LC-MS vials and stored at -80 ℃ until UHPLC-QE Orbitrap/MS analysis. A quality control (QC) sample was prepared by pooling small aliquots of the supernatants from each serum sample.
2.7 LC-MS/MS analysis
LC-MS/MS analyses were performed using a UHPLC system (U3000, Thermo) with a UPLC HSS T3 column (2.1 mm × 100 mm, 1.8 μm) coupled to Q Exactive (Orbitrap MS, Thermo). Mobile phase A was 0.1% formic acid in water for positive-ion mode, 5 mmol/L ammonium acetate in water for negative-ion mode, and the mobile phase B was acetonitrile. The elution gradient was set as follows: 0 min, 1% B; 1 min, 1% B; 8 min, 99% B; 10 min, 99% B; 10.1 min, 1% B; 12 min, 1% B. The flow rate was 0.5 mL/min, and the injection volume was 2 μL. A QE mass spectrometer was used for its ability to acquire MS/MS spectra on an information-dependent basis (IDA) during an LC/MS experiment. In this mode, the acquisition software (Xcalibur 4.0.27, Thermo) continuously evaluates the full scan survey MS data as it collects and triggers the acquisition of MS/MS spectra depending on preselected criteria. ESI source conditions were set as follows: sheath gas flow rate of 45 Arb, aux gas flow rate of 15 Arb, capillary temperature of 320 ℃, full mass resolution of 70000, MS/MS resolution of 17500, collision energy of 20/40/60 eV in the NCE model, and spray voltage of 3.8 kV (positive) or -3.1 kV (negative).
2.8 Data procession and annotation
MS raw data files were converted to the abf format using “ABFconvert” and processed by “MS dial” (version 4.6). The preprocessing results generated a data matrix that consisted of the retention time (RT), mass-to-charge ratio (m/z) values, and peak intensity. MassBank of North America (MoNA) was used for peak annotation after MS dial data processing with an in-house MS/MS database.
2.9 Statistical analysis
The data matrix was imported into the R platform (version 3.6.2) for statistical analysis. Paired t-test was performed for self-paired samples to identify the differential metabolites in each treatment group. The metabolic fold-change (FC) was calculated by comparing the median value after dietary intervention to the baseline level. Metabolites with a p value less than 0.05 and absolute FC larger than 1.5 were further defined as dysregulated metabolites and then mapped into the KEGG database (http://www.genome.jp/kegg/) for pathway enrichment analysis using the hypergeometric test.