2.1. Cells, viruses, and antibodies.
BHK-21 cells were provided by the Gansu Tech Innovation Center of Animal Cell (Lanzhou, China). BHK-21 cells were maintained in DMEM (Minhai Bio-engineering) supplemented with 10% FBS (Minhai Bio-engineering). Cells were cultured in the incubator at 37 °C with 5% CO2.
The EMCV strain used in the current study was the BHK-21 cells adapted EMCV (GenBank: X74312) and its titer was 106.0 TCID50 ml-1. The plaque-forming unit (PFU) was calculated according to previously literatures [21].
Mouse monoclonal antibody (mAb) against Caveolin-1 and rabbit polyclonal antibody (pAb) anti-Caveolin-1 were bought from Beyotime. MAb against beta-actin was from Abcam. MAb against EMCV-VP1 was kindly donated by Dr. Juan Bai (College of Veterinary Medicine, Nanjing Agricultural University). The HRP-labeled secondary antibody, Alexa fluor-488-conjugated anti-mouse and CyTM3-conjugated anti-rabbit IgG (H+L) were from Jackson ImmunoResearch Laboratories.
2.2. qRT-PCR
Total RNA was isolated, followed by qRT-PCR as previously reported [22], with primers EMCV-3D qF: GTCATACTATCGTCCAGGGACTCTAT and 3D qR: CATCTGTACTCCACACTCTCGAATG. GAPDH was used as the internal reference, the primers sequence is GAPDH qF: AAGGCCATCACCATCTTCCA and GAPDH qR: GCCAGTAGACTCCACAACATAC.
2.3. Gene overexpression and RNA interference
To evaluate the effect of Caveolin-1 in the infection as well as invasion of EMCV into BHK-21 cells, the replication-defective lentivirus system provided by Dr. Enqi Du (Northwest A&F University, China), was used to construct a recombinant plasmid to overexpress caveolin-1. Total RNA was extracted from BHK-21 cells and reverse transcribed into cDNA. The caveolin-1 gene was amplified by PCR based on the murine caveolin-1 sequence in GenBank (accession No. U07645.1). The amplified PCR products were digested by restriction endonuclease XbaI and BamH I (NEB, MA, USA) and inserted pTRIP-CMV-IRES-Puro. The recombinant plasmid named pTRIP-CAV1 using the primers listed in Table 1. As a control, EGFP has been constructed by using the methods and named pTRIP-EGFP. Lentivirus was produced with recombinant lentivirus vector pTRIP-CAV1 and pTRIP-EGFP according to the reference [23], the transfection cells were named BHK-CAV1 and BHK-EGFP, respectively.
Gene
|
Primer sequence (5´-3´)
|
Size (bp)
|
Caveolin-1
|
F:GCTCTAGAATGTCTGGGGGCAAATACGTGGACTC
|
537
|
R:CGGGATCCTCATATCTCTTTCTGCGTGCTGATGC
|
Table 1
Caveolin-1 overexpresses primer sequences
Moreover, we designed three individual small interfering RNA (siRNA) against caveolin-1 (Rebobio, Guangdong, China) and cells were transfected. The sequence of the siRNA strands has been showed in Table 2. The transfection of the siRNA was performed with Invitrogen Lipofectamine™ 2000 (ThermoFisher, MA, USA) by following the manufacturer's instructions. The silencing efficiencies were measured by qRT-PCR and WB analysis. After culturing for 2 days, the cells were infected with EMCV. At 9 hours post-infection (hpi), WB and virus infectivity assays were performed.
Name of siRNA
|
Sequence(5’-3’)
|
Mus-Cav1-siRNA1
|
GCAACATCTACAAGCCCAA
|
Mus-Cav1-siRNA2
|
CCACCTTCACTGTGACAAA
|
Mus-Cav1-siRNA3
|
CATCAAGAGCTTCCTGATT
|
Table 2
The sequence of the caveolin-1 siRNA
2.4. Chemical inhibitors and Cell viability Determination
DMEM supplemented with 10% FBS and one of the following chemical inhibitors: Nystatin, Pitstop, dynasore, mitmab, cytochalasin D, jasplakinolide and 1,1'-Dithiobis-2-naphthalenol (IPA-3) were purchased from Abcam. Methyl-β-cyclodextrin (MβCD) and NH4Cl were purchased from Sigma (Sigma, MO, USA), bafilomycin A1 and wortmannin were purchased from Solarbio (Solarbio, Beijing, China). The effects of inhibitors on cells were confirmed by the cell viability assay (see below). The inhibitors were present for 1 hr before and throughout the EMCV infection assay.
After RNA interference and chemical inhibitors treatment, the cell viability was conducted by the CellTiter 96® Aqueous Non-Radioactive Cell Proliferation Assay kit (Promega, WI, USA) according to the protocol.
2.5. Virus infectivity assays, Post-entry inhibitory effects and detection of virus internalization
For virus infectivity assays, cells were incubated with EMCV at 0.1 multiplicity of infection (MOI) for 1 hr at 37°C in serum-free medium and then washed three times with pre-warmed phosphate-buffered saline (PBS) and maintained in DMEM with 3% FBS. The virus replication was examined by virus yield titration, qRT-PCR and western blotting.
For post-entry inhibitory effects, cells were incubated with EMCV at 0.1 MOI. 2hrs later, the free viruses were washed by PBS and culture medium containing chemical inhibitors was added in cells. Cells incubated for 9 hpi were harvested for further analysis [24].
The ability of EMCV internalized to BHK-21 cells, BHK-Cav1 and BHK-EGFP were determined by measuring the quantity of infectious virus. For binding assay, cells were infected by 1 MOI EMCV at 37°C. 1hr later, cells were washed five times and prepared by three cycles of freeze-thaw [25]. The last wash solution was collected and titrated on BHK-21 to determine the quantity of the virus present after washing [26].
2.6. IFA and Confocal microscopy
Cells were fixed with ice cooling 75% ethanol at 4°C for 30 min. For Co-localization studies, cells were permeabilized with 0.1% Triton X-100 when needed. After washed slides in PBS, the suitable primary antibody was added and incubated at 37°C. 1 hr later, the slides were washed again and 100μl secondary flurescen antibody was added to the samples. Then the sample was incubated for 1 hr. Finally, the samples counterstained with 4, 6-diamidino-2-phenylindole (DAPI) for 5 min at room temperature. An Olympas IX73 inverted fluorescence microscope (Olympas, Japan) or confocal microscope ZEISS LSM 900 was used to mount and analyze (Zeiss, Oberkochen, Germany).
2.7. Western Blotting (WB)
Samples were lysed in NP-40 lysis buffer (Beyotime, Shanghai, China) and concentration was measured using the Pierce BCA Protein Assay Kit (Thermo Fisher Scientific, A,USA), and then heated 95°C 5 min. Denature sampls run in 10% gel and transfered to PVDF membrane (Millipore, MA, USA). After incubated in 5% milk for 1hr, the membrane was incubated with the primary antibody overnight at 4°C and then treated with HRP-conjugated secondary antibody for 2 hrs at room temperature. The specific bands were obtained with chemiluminescence (Cowin Bioscience, Beijing, China). Protein ladders were from YEASEN (Yeasen Biotech, Shanghai, China).
2.8. Statistical analyses
The results were analyzed by with one-way ANOVA using Graphpad PRISM Version 5.0 software. All data were shown as the means ± standard deviations (SD). Differences were considered statiscally significant if P-value was less than 0.05 (*P<0.05; **P<0.01; ***P<0.001).