Tissue samples
GC tissues were obtained from patients undergoing surgical resection of GC. All gastric cancer tissues undergo urease test to screen out H. pylori positive tissues. The Ethics Committee of Chongqing University Cancer Hospital approve the protocols (CQUCH2019021) for acquiring all tissue samples and obtained the patient's informed consent form.
H. pylori culture
H. pylori strains were acquired from the Chinese Center for Disease Control and Prevention and cultivated for one week at 37°C and 5% O2 on commercial H. pylori culture plates.
Cell culture
Gastric epithelial cells (GES-1) and GC cells (MGC-803) were acquired from the Cell Center of Shanghai Chinese Academy of Sciences. GES-1 and MGC-803 cells were cultured in DMEM with 10% fetal bovine serum at the environment of 37°C with 5% CO2. The cells were treated with H. pylori in DMEM without fetal bovine serum and antibiotics at a multiplicity of infection (MOI) of 100:1. The co-culture was maintained for 48 hours at 37°C and 5% CO2.
Cell transfection
The CDK1 siRNA and negative control sequences were designed and synthesized in accordance with reference [18] for cell transfection. MGC-803 cells were classified as control (Con), negative control (NC), and siCDK1 groups. Three times 105 cells per well were inoculated in a 12-well plate and incubated at 37°C and 5% CO2 for 12 hours. Prior to transfection, 5 µl of siRNA was diluted in 200 µl of serum-free Opti-MEM (no.cat. 51985091, Gibco; Thermo Fisher Scientific, Inc., USA). The samples were incubated at 37°C for 30 minutes after the addition of Lipofectamine TM 3000 (no.cat. L3000001, Thermo Fisher Scientific, Inc., USA) to the diluted siRNA solution (total volume 400 l). Each well received 200 µl of this solution, and the cell culture plate was shaken gently to mix the culture solution. Cells that had been transfected were then cultured for further experiments.
QRT-PCR assay
Total RNA was isolated from cells using Trizol reagent (no.cat. 15596026, Thermo Fisher Scientific, Inc., USA) according to the manufacturer's instructions. Using the PrimeScript RT Reagent Kit (RR037A, TaKaRa, Inc., Dalian, China), 0.5 mg of total RNA was reverse-transcribed into cDNA. RT-PCR was performed on an Eppendorf Mastercycler PCR using SYBR Green qPCR Master Mix (no.cat. HY-K0501A, TaKaRa Inc., Dalian, China) according to manufacturer's instructions. After 5 minutes of initial denaturation at 94°C, the sample underwent 38 cycles of denaturation for 30 s, annealing for 25 s, and extension for 25 s at a temperature of 72°C. The following primer sequences were devised and synthesized by Invitrogen Company for RT-PCR: CDK1, F 5'-CTGGCTGATTTTGGCCTTGC-3' and R 5'-GAGTAACGAGCTGACC
CCAG; GAPDH, F 5'-ATGGATCCTTATGCGCGAAATTCTTC-3' and R 5'-ACACATCATATTCTTGGCATCCCAC-3'. GAPDH served as a quality control measure. The relative gene expression was determined with the 2−ΔΔCt method [19].
Assays of migration and invasion
Using a Transwell apparatus (no.cat. CLS3460, Corning, Inc., New York, USA) with Matrigel (no.cat. E6909, Thermo Fisher Scientific, Inc., USA) in the upper chamber, invasion capability was evaluated. Without Matrigel, the same procedure was followed for the migration test. Sorted into NC, siCDK1, and siCDK1-Hp groups, transfected MGC-803 cells were cultured in DMEM medium without FBS for 12 hours. The upper compartment was inoculated with 5×104 cells in 0.3 ml of DMEM medium without FBS, while the lower compartment was supplemented with DMEM medium containing 20% FBS. After 24 hours of incubation, the cells on the upper surface were removed, and the migrated cells on the lower surface were fixed and stained at room temperature for 15 minutes with 0.1% g/ml crystal violet (no.cat. C0121, Beyotime Biotechnology, Inc., China). In each experiment, five random fields were analyzed with an Olympus IX71 Imaging System (Olympus, Inc.; magnification, ×100) to ascertain the number of cells that had completely invaded the filter. Each experiment was conducted a minimum of three times and evaluated in duplicate.
Western blot analysis
The cells were lysed with RIPA lysis solution (no.cat. P0013C, Beyotime Biotechnology, China) and the supernatants were collected for Western blot analysis. Using a BCA reagent (no. cat. P0012S, Beyotime Biotechnology, China), the protein concentrations were determined. On 10% SDS-PAGE, 20 g of proteins per lane were separated and transferred to nitrocellulose membranes. Blots were blocked with 5% nonfat milk at 25°C for 1 hour, followed by an overnight incubation at 4°C with primary monoclonal antibodies specific for CDK1, P53, P27, CyclinA2, -Tubulin, and GAPDH (ProteinTech Group, China). After development, each blot was rinsed three times in 1X TBST (catalog number ST677, Beyotime Biotechnology, China). The blots were then visualized with a ChemiScope 6200 Touch Integrated Chemiluminescence Imaging System (Shanghai Qinxiang Scientific Instrument Co., China). ImageJ version 2.1.4.7 was used to analyze band intensity.
Inflammatory factors analysis
Inflammatory indicators were analyzed by measuring the amounts of IL-8 and TNF- in supernatants from the NC, siCDK1, and siCDK1-Hp groups using enzyme-linked immunosorbent assay (ELISA) (cat no. KE00006 and KE00154, ProteinTech Group, China) per the manufacturer's instructions. The levels of IL-8 and TNF- were calculated with the help of standard curves and then expressed as picograms per microliter. At least triplicates of each experiment were performed.
Apoptosis analysis
Flow cytometry with the Annexin V-FITC/PI apoptosis reagent (co.no. E-CK-A211, Elabscience, China) was used to analyze apoptosis in the NC, siCDK1, and siCDK1-Hp cell groups, according to the manufacturer's instructions. The cells were rinsed three times with PBS, resuspended in 1X binding buffer, stained with annexin V FITC and propidium iodide (PI), and incubated for 15 minutes at 25°C in the dark. The apoptotic rate of the cells was determined using a flow cytometer (BD Biosciences, USA). Each experiment was replicated a minimum of three times.
Immunohistochemistry analysis
6 GC tissues, 5 H. pylori-infected GC tissues, and 6 paracancerous tissues (Shanghai Xinchao Biotechnology, China) were processed overnight at room temperature with 1X TBST (no.cat. ST677, Beyotime Biotechnology, China) for immunohistochemical staining. Next, a primary monoclonal antibody specific for CDK1 (1:24,000; cat. no. 67575-1-Ig, ProteinTech Group, Inc., China) was incubated with the tissues overnight at 4°C. Tissues were washed three times with phosphate-buffered saline (no.cat. C0221A, Beyotime Biotechnology, China) after development. The tissues were then treated with a secondary antibody, goat anti-mouse IgG (H + L) FITC-labeled (cat. no. A0568, Beyotime Biotechnology, China), for two hours at 25°C. Images were taken using a Shanghai Qinxiang Scientific Instrument Co., China's ChemiScope 6200 Touch Integrated Chemiluminescence Imaging System.
Statistical analysis
For the purposes of statistical analysis and graph plotting, GraphPad Prism 9.0 (GraphPad Software, Inc. A one-way analysis of variance followed by Tukey's post hoc test and the Student's t-test were used for statistical analysis. The data are shown as Mean Standard Error of Mean with a significance level of P 0.05.