The expression of TFAP2C is elevated in patients with bladder cancer and demonstrates a positive correlation with cancer mortality.
For the comprehensive analysis of single-cell data collected from bladder cancer patients24–26, we categorized the 12 human samples into three groups: normal, non-invasive, and invasive (Fig. 1A). By employing established markers, we successfully identified 16 distinct cell populations, namely epithelial (EPCAM, SFN), basal (EPCAM, SFN, KRT5), intermediate (EPCAM, SFN, KRT13), umbrella (EPCAM, SFN, KRT20, UPK3A), pro-epithelial (EPCAM, SFN, MKI67, TOP2A), fibroblasts (COL1A1, DCN, PDGFRA), adipocytes (COL1A1, DCN, TCF21, APOE), myofibroblasts (COL1A1, DCN, ACTA2, TAGLN), smooth muscle (ACTA2, TAGLN), pericytes (COL1A1, DCN, RGS5, PDGFRB), capillary (PECAM1, CLDN5, PTPRB, CD93), macrophages (PTPRC, CD68, C1QA, APOE), monocytes (PTPRC, CD14, S100A8), dendritic cells (PTPRC, CSF2RA, CD1C, LAMP3), B cells (PTPRC, CD79A, MS4A1), and T cells (PTPRC, CD3E, CD3D) (Fig. 1B-D). Additionally, we utilized the inferCNV package to accurately identify cancer cell populations (Fig. 1B-E).
Considering the initiation of bladder cancer within the bladder epithelium, we conducted an analysis of transcription factor activity in various cell types including cancer cells, epithelial cells, basal cells, intermediate cells, umbrella cells, and pro-epithelial cells. Our findings indicate higher transcriptional activities of FOS, EGR1, and TFAP2C in cancer cells compared to other cell types (Fig. 2A). Moreover, the expression levels of FOS, EGR1, and TFAP2C genes were significantly elevated in cancer cells when compared to normal epithelial cells (Fig. 2B). Further analysis utilizing the GEPIA database demonstrated a significant increase in TFAP2C expression levels in bladder cancer tissues as compared to normal tissues (Fig. 2C). Consistent with these findings, qPCR analysis revealed a marked increase in TFAP2C expression levels in bladder cancer tissues compared to normal tissues (Fig. 2D). This observation was corroborated by the significant elevation of TFAP2C protein levels in bladder cancer tissues (Fig. 2E-F). Notably, analysis using the GEPIA database revealed a significant negative correlation between high TFAP2C expression and the survival rate of bladder cancer patients (Fig. 2G). Taken together, these results strongly suggest that TFAP2C may play a crucial role in the development of bladder cancer.
EIF5A is a target protein of TFAP2C
Utilizing single-cell sequencing data, we employed computational methods to predict the target genes of FOS, EGR1, and TFAP2C, as illustrated in Fig. 3A. Our analysis revealed that EIF5A has been implicated in the progression of various cancers23, 27. Hence, we proceeded to assess the correlation between TFAP2C and EIF5A expression levels in both the non-muscle invasive bladder cancer (NMIBC) and muscle invasive bladder cancer (MIBC) groups, using single-cell sequencing data (Fig. 3B). We observed an increased correlation between TFAP2C and EIF5A expression levels in cancer cells compared to normal epithelial cells. Furthermore, analysis using the GEPIA database corroborated these findings by demonstrating a positive correlation between TFAP2C expression levels in bladder cancer tissues and EIF5A expression levels (Fig. 3C). This consistency with the single-cell sequencing results suggests that TFAP2C likely regulates the expression of EIF5A. To further validate the regulatory role of TFAP2C on EIF5A, we conducted experiments using the bladder cancer cell line T24. Knocking down TFAP2C resulted in a significant reduction in EIF5A protein levels (Fig. 3D-E), while overexpressing TFAP2C led to a significant decrease in EIF5A protein levels (Fig. 3G-H). Similar results were observed in another bladder cancer cell line, 5637 (Fig. 3D, F, G, and I). Collectively, these findings strongly support the notion that TFAP2C positively regulates EIF5A expression.
The expression of EIF5A is elevated in patients with bladder cancer and exhibits a positive correlation with cancer mortality
We obtained three sets of differential genes through different comparisons: one set by comparing cancer cells with normal epithelium in the NMIBC group, another set by comparing cancer cells with normal epithelium in the MIBC group, and the last set by comparing cancer cells with epithelial cells in the normal control groups of both NMIBC and MIBC. By taking the intersection, we identified sixteen up-regulated genes and eight down-regulated differential genes (Fig. 4A and B). These differential genes underwent KEGG enrichment analysis, which revealed enrichment in the "Bladder cancer" pathway, indicating their potential involvement in bladder cancer progression (Fig. 4C). In both the NMIBC and MIBC groups, EIF5A showed a significant increase in expression levels in cancer cells compared to normal epithelial cells (Fig. 4D). Analysis using the GEPIA database confirmed significantly elevated EIF5A expression levels in bladder cancer tissues compared to normal tissues (Fig. 4E). Furthermore, qPCR assays demonstrated a significant increase in EIF5A expression levels in bladder cancer tissues (Fig. 4F). Consistent with these findings, EIF5A protein levels were significantly elevated in bladder cancer tissues (Fig. 4G and H). Additionally, analysis using the GEPIA database revealed a significant negative correlation between high EIF5A expression and the survival rate of bladder cancer patients (Fig. 4I). These results collectively suggest that EIF5A likely plays a crucial role in the development of bladder cancer.
TFAP2C enhances the proliferation, migration, and invasion of bladder cancer cells through its interaction with EIF5A
Using single-cell data, we classified cancer cells into two subpopulations based on the expression levels of TFAP2C and/or EIF5A. TFAP2Chigh cancer cells exhibited significantly higher expression of genes related to cell proliferation (KI67, PCNA, MCM2) and migration (TNC, SNAI1, CTNNB1, CDH1, VIM, ITGB1) compared to TFAP2Clow cancer cells (sFig. 1A). Similarly, EIF5Ahigh cancer cells showed significantly higher expression of cell proliferation and migration-related genes than EIF5Alow cancer cells (Fig. 1B).
Moreover, the expression of cell proliferation and migration-related genes was significantly higher in TFAP2ChighEIF5Ahigh cancer cells compared to TFAP2ClowEIF5Alow cancer cells (Fig. 5A). To further confirm the regulatory effect of TFAP2C on EIF5A in bladder cancer cells, we conducted experiments using the T24 bladder cancer cell line. We established a control group (pcDNA3.1), TFAP2C overexpression group (pcDNA3.1-TFAP2C), EIF5A inhibition group (GC7), and TFAP2C overexpression combined with EIF5A inhibition group (pcDNA3.1-TFAP2C + GC7).
The percentage of EdU-positive T24 cells was significantly increased in the pcDNA3.1-TFAP2C group compared to the pcDNA3.1 group, while it was significantly decreased in the pcDNA3.1-TFAP2C + GC7 group compared to the pcDNA3.1-TFAP2C group (Fig. 5B). CCK8 assay revealed enhanced proliferation ability in the pcDNA3.1-TFAP2C group compared to the pcDNA3.1 group, which was significantly reduced in the pcDNA3.1-TFAP2C + GC7 group compared to the pcDNA3.1-TFAP2C group (Fig. 5C). The number of T24 cell clones and migrating T24 cells were significantly increased in the pcDNA3.1-TFAP2C group compared to the pcDNA3.1 group, whereas they were significantly decreased in the pcDNA3.1-TFAP2C + GC7 group compared to the pcDNA3.1-TFAP2C group (Fig. 5D-E). Additionally, the pcDNA3.1-TFAP2C group displayed an increased number of invading T24 cells compared to the pcDNA3.1 group, while the pcDNA3.1-TFAP2C + GC7 group exhibited a decreased number of invading T24 cells compared to the pcDNA3.1-TFAP2C group (Fig. 5F).
Similar results were observed in the 5637 bladder cancer cell line (Fig. 5B-F). These findings indicate that TFAP2C overexpression promotes the proliferation, migration, and invasion abilities of bladder cancer cells, and inhibition of EIF5A impairs the pro-carcinogenic effect of TFAP2C.
We established experimental groups using two bladder cancer cell lines, T24 and 5637 cells, including a control group (sh-CTRL), a TFAP2C knockdown group (sh-TFAP2C), an EIF5A activation group (Spermidine), and a TFAP2C knockdown combined with EIF5A activation group (sh-TFAP2C + Spermidine).
Compared to the sh-CTRL group, the sh-TFAP2C group exhibited significantly reduced proliferation (Fig. 5G-I), migration (Fig. 5J), and invasion (Fig. 5K) of both T24 and 5637 cells. Moreover, the sh-TFAP2C + Spermidine group showed further reduction in proliferation (Fig. 5G-I), migration (Fig. 5J), and invasion (Fig. 5K) compared to the sh-TFAP2C group. These findings confirm that TFAP2C promotes the proliferation, migration, and invasion abilities of bladder cancer cells through upregulation of EIF5A.