PI3K-Akt-mTOR signaling patterns in human uterine endometrial cancer spheroid cells
First, we evaluated the protein expression and gene mutation profile of PI3K-Akt-mTOR signaling to delineate the signaling status in endometrial cancer spheroid cells. Through western blot analysis of seven distinct endometrial cancer spheroid cells, we observed variations in the expression levels of signaling factors, including phospho-Akt, phospho-PTEN, and phospho-p70S6K. Intriguingly, their expression did not correlate with the ALDH1A1 expression within the spheroid cell types (Fig. 1A).
Subsequently, an immunohistochemical evaluation of spheroid-derived xenograft tumors was undertaken alongside the original clinical cancer tumor specimens. This highlighted that the expression patterns of phospho-Akt, phospho-p70S6K, and phospho-PTEN echoed the results observed in the aforementioned western blot analysis of spheroid cells. Notably, although a heterogeneous expression was discerned across tumors, a considerable number of cancer cells exhibited elevated phospho-Akt expression in tumors originating from or derivatives of EMN24 and EMN144 cells. Furthermore, the tumors from EMN24 cells displayed pronounced phospho-p70S6K expression, and the tumors from EMN108 cells showed evident phospho-PTEN expression (Supplementary Fig. S1A). In a broader context, mutation profiles across 22 endometrial cancer spheroid cells mirrored those witnessed in the original clinical tumor specimens (Fig. 1B) (12).
Among these PI3K-Akt-mTORC1-related signaling factors, a previous study showed that phospho-p70S6K is a predictive tool for the outcomes of patients with type II endometrial cancer when used as an immunohistochemistry (IHC)-based marker (2). This was particularly significant among markers related to the activation of the PI3K-Akt-mTORC1 signaling pathway (2). Furthermore, the phosphorylation observed at T389 showcased a connection with malignancy-related p70S6K activity (19). Merging this insight with the observed expression results of phospho-p70S6K in both spheroid cells and spheroid-derived xenograft tumors, we sought to confirm the expression of phospho-p70S6K in 35 clinically advanced endometrial cancer tissue specimens through immunohistochemical staining (Fig. 1C). Kaplan–Meier survival analyses showed that an elevated phospho-p70S6K expression may be correlated with overall survival (Fig. 1D, p < 0.05), not with progression-free survival (Supplementary Fig. S2A). The expression was not correlated with histological grade or clinical stage in these advanced-stage cases (Supplementary Fig. S2B and S2C, Fisher’s exact test). Though conclusions drawn from a limited case pool remain preliminary, our findings accentuate that phospho-p70S6K expression might indeed be intertwined with an adverse prognosis in advanced-stage uterine endometrial cancer.
PI3K Inhibitors curbing the proliferation of endometrial cancer spheroid cells
With the aforementioned results of phospho-p70S6K expression being related to the activation of the PI3K-Akt-mTORC1 signaling pathway (2), we then explored the effects of PI3K-Akt-mTORC1 signaling in endometrial cancer spheroid cells. Our in vitro cancer spheroid model has displayed superior efficacy in comparison to the cancer stem cell model (11, 12) and existing in vitro drug sensitivity evaluations (16). Riding on this fundamental advantage, we first assessed the sensitivity of endometrial cancer cells toward PI3K inhibitors. The particular focus was on Alpelisib, a prominent PI3K inhibitor deployed in clinical trials to treat breast and several other cancers (20, 21).
Upon assessment, we categorized the endometrial cancer cells into three distinct sensitivity groups with respect to Alpelisib:
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High-sensitivity group: EMN18 and EMN21 cells.
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Low-sensitivity group: EMN103 and EMN144 cells.
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Intermediate-sensitivity group: Comprising the remaining cell types (Fig. 2A and 2B).
Our examination of other PI3K inhibitors, namely Taselisib and Copanlisib, showed sensitivity patterns similar to those observed for Alpelisib (Supplementary Fig. S3A and S3B). Alpelisib treatment enhanced caspase levels when the spheroid cellular growth was inhibited (Fig. 2B and 2C). To juxtapose in vivo sensitivity against its in vitro counterpart, we administered Alpelisib to NOG mice thrice weekly. The outcomes were illuminating: the xenograft tumors stemming from EMN18 and EMN21 spheroid cells (from the in vitro high-sensitivity group) exhibited a decline post-Alpelisib treatment (Fig. 2D). Moreover, tumors from EMN108 and EMN81 spheroid cells (intermediate-sensitive) also exhibited growth suppression (Supplementary Fig. S3C). Nonetheless, tumors originating from EMN144 cells (low-sensitivity group) remained unaffected by Alpelisib treatment (Supplementary Fig. S3D).
Collectively, these findings highlight that the Alpelisib sensitivity observed in our in vitro spheroid model mirrors the outcomes witnessed during in vivo applications.
Additive effects of PI3K and ALDH inhibitors on endometrial cancer spheroid cells' growth
Next, we elucidated the interactions between PI3K-Akt-mTORC1 signaling and cancer stemness using ALDH, which was found to be a functional marker of uterine endometrial cancer stem cells in our previous study (12). Intriguingly, a targeted sequencing analysis revealed identical mutational profiles between ALDH-high and ALDH-low spheroid cells (Fig. 3A). Moreover, despite the suppression of phospho-Akt and phospho-p70S6K expression post-Alpelisib treatment in sensitive spheroid cells (Fig. 3B), we observed no discernable differences in the in vitro sensitivity to Alpelisib between ALDH-high and ALDH-low cells (data not shown). This observation was consistent with the changes in ALDH activity or ALDH1A1 expression (Fig. 3B and Supplementary Fig. 4A). Further, Alpelisib treatment diminished phospho-p70S6K expression in both ALDH-high and ALDH-low cells (Supplementary Fig. S4B).
Given the above, we postulated that ALDH activity might be independent of PI3K sensitivity. To put this theory to the test, we co-treated spheroid cells with disulfiram (an ALDH inhibitor) and Alpelisib. Remarkably, this combination treatment led to a substantial inhibition of spheroid growth (Fig. 3C).
Validating these in vitro findings, we introduced this co-treatment to spheroid cell-transplanted mice. Tumors post-co-treatment were roughly half the size compared with those treated solely with Alpelisib. This was consistent for both high-sensitivity (EMN21, Fig. 3D) and intermediate-sensitivity (EMN24, Supplementary Fig. S4C) cell groups. Additionally, consistent with in vitro results, Alpelisib alone did not alter the ALDH activity in xenograft tumors (Supplementary Fig. S4D).
Conclusively, while ALDH activity appears to have no direct impact on PI3K inhibition, a combination of ALDH and PI3K inhibitors results in an additive inhibition of endometrial cancer progression.
Additive inhibition of endometrial cancer spheroid cells by combining Akt and ALDH inhibitors
Pivoting from our work with PI3K inhibitors, we turned our attention to the effects of Akt inhibitors on endometrial cancer spheroid cells. Notably, cells that exhibited low-to-intermediate sensitivity to PI3K inhibitors—specifically, the EMN81, EMN103, and EMN144 cell lines (Fig. 2A and Supplementary Fig. S3A and S3B)—responded to low-dose treatment with Akt inhibitors, Ipatasertib and Caplivasertib (Fig. 4A–4C). This sensitivity was marked by an uptick in activated caspases post-Ipatasertib treatment, implying cytotoxic effects (Fig. 4D).
However, it is worth noting that while EMN24 cell-derived xenograft tumors demonstrated resistance to Ipatasertib in vitro, they remained unresponsive to the drug even in vivo (Supplementary Fig. S5). Such findings underscore the potential of baseline Akt activity, especially linked to PTEN mutations, as a valuable predictor for Akt inhibitor sensitivity (Fig. 1A and 1B) (22).
While we observed a reduction in phospho-p70S6K expression after treatment with the Akt inhibitor, there was no noticeable shift in ALDH activity or expression (Fig. 4E). Such observations led us to hypothesize that ALDH activity remained unaffected by Akt inhibition. However, dual inhibition of both Akt and ALDH might collectively hinder endometrial cancer cell growth.
To test this, we investigated the combined impact of ALDH and Akt inhibitors, both in vitro and in vivo. The resulting data was as follows: combination treatment not only triggered apoptosis in endometrial cancer cells but also hindered their proliferation (Fig. 4F–4I). Mirroring our findings with PI3K inhibitors, this co-treatment approach further validated the additive repression of endometrial cancer progression, independent of any influence of ALDH activity on Akt inhibition.
mTOR inhibitor reduces the proliferation of endometrial cancer spheroid cells with ALDH activity
Drawing insights from our experiments with PI3K and Akt inhibitors, it became evident that PI3K/Akt activity was independent of ALDH activity. Our exploration then shifted toward understanding the influence of mTOR inhibition on endometrial cancer spheroid cell proliferation. Upon conducting in vitro sensitivity assays, we observed varying responses to mTOR inhibitors, everolimus, and Torin1. Notably, the range of sensitivities was more consistent than what was observed for PI3K and Akt inhibitors (Fig. 5A and Supplementary Fig. S6A). Following mTOR inhibitor administration, there was a decline in the levels of both phospho-p70S6K and phospho-4EBP1 across the spheroid cell population (Fig. 5B). Intriguingly, this decline in phospho-p70S6K was more accentuated in ALDH-high cells compared with ALDH-low cells (Fig. 5C and Supplementary Fig. S6B). Moreover, the ALDH-high cells exhibited heightened sensitivity to everolimus in comparison to their ALDH-low counterparts (Fig. 5D). It was discerned that the exogenous overexpression of ALDH1A1 further augmented this sensitivity to everolimus (Fig. 5E). Collectively, these findings bolster the notion that cells with higher ALDH activity inherently possess increased mTOR activation relative to cells with low ALDH activity. Alternatively, combination treatment with disulfiram and everolimus also hindered the spheroid cell proliferation (Fig. 5F). In conclusion, while ALDH activity appears to be linked to mTORC1 activity, a combination of ALDH and mTORC1 inhibitors additively impedes endometrial cancer progression.
Endometrial cancer spheroid cells exhibiting high ALDH activity show enhanced sensitivity to mTOR inhibitors
Based on the aforementioned results, we speculated that heightened ALDH activity might partially enhance mTOR sensitivity in endometrial cancer. To reveal the relationship between ALDH and mTOR, we examined changes in the expression of the PI3K-Akt-mTOR signaling pathway after manipulating ALDH activity. Disulfiram, which reduced ALDH activity, led to a decrease in phospho-p70S6K levels, whereas phospho-PI3K and phospho-Akt levels remained unchanged (Fig. 6A and Supplementary Fig. S7A). Additionally, gene set enrichment analysis (GSEA) revealed the ALDH-high cells preferentially expressed genes included in the gene set of hallmark of mTORC1 signaling (false discovery rate [FDR] q-value < 0.01, normalized enrichment score [NES] 1.59, p-value < 0.01) (23), genes upregulated after ectopically expressing eIF4E, and genes upregulated in control cells compared with eIF4GI-silenced cells (24, 25) (Fig. 6B and Supplementary Fig. S7B). Moreover, ALDH-high cells clearly expressed more phospho-p70S6K than ALDH-low cells (Fig. 6C). The exogenous overexpression of ALDH1A1 that led to ALDH activation (12) ultimately increased phospho-p70S6K levels (Fig. 6D). These results suggested that ALDH activity primarily affected mTORC1 activation rather than PI3K or Akt. To further confirm the relationship between ALDH and mTORC1 signaling, we determined whether mTOR activation could rescue the inhibitory effect of ALDH inhibitor on cancer cells. As expected, mTOR activator MHY1485 partially mitigated disulfiram-induced cytotoxicity in endometrial cancer spheroid cells (Fig. 6E, 6F, and Supplementary Fig. S7C–S7F). Moreover, western blot analysis indicated that MHY1485 could partially revert the disulfiram-mediated reduction in phospho-p70S6K expression (Fig. 6G and Supplementary Fig. S7G).
LDHA bridges ALDH activity and mTORC1 activation in endometrial cancer spheroid cells
To understand how ALDH influences mTOR signaling in endometrial cancer cells, we characterized its functional isoforms. Notably, of the 19 ALDH isoforms with analogous catalytic functions, ALDH1A1 predominantly dictates its activity (23). Our findings further cemented this observation, as endometrial cancer spheroid cells majorly expressed ALDH1A1, sidelining other ALDH isoforms (12). A pivotal function of ALDH1A1 includes the conversion of retinol to retinoic acids, driving cancer proliferation through multifaceted mechanisms (24, 25). Corroborating our premise that ALDH-mediated retinoic acid modulates endometrial cancer development in vitro, we discerned that additional retinoic acid rescued the cell mortality caused by disulfiram (Supplementary Fig. S8A–S8E). This mirrored the outcome when mTORC1 was activated with MHY1485 (Fig. 6E and 6F and Supplementary Fig. S7C–S7F). Experiments conducted on cells overexpressing ALDH1A1 further supported this observation (Supplementary Fig. S8F). Moreover, western blot outcomes indicated that retinoic acid could partially revert the disulfiram-mediated decrease in phopho-p70S6K expression (Supplementary Fig. S8G and S8H). This modulation paralleled the effects of the mTORC1 activator MHY1485 (Fig. 6G and Supplementary Fig. S7G).
To assess the influence of RA on mTOR activation, we combined GSEA results from microarray data and published RARA binding data from the ChIP-Atlas (http://chip-atlas.org/). Of 184 hallmark mTORC1 signaling genes (Fig. 6B) (26), 85 were core enrichment genes associated with ALDH-high endometrial cancer cells. Merging this with RARA-regulated genes from ChIP-Atlas, specifically those linked to malignancies, yielded eight candidate genes (Fig. 7A). Significantly, LDHA was predominantly expressed in ALDH-high cells (Fig. 7B). Delving deeper, ALDH1A1 overexpression augmented LDHA levels, whereas ALDH inhibition, using disulfiram, attenuated its expression (Fig. 7C, 7D and Supplementary Fig. S9A). Additionally, ALDH-high cells and exogenous ALDH1A1-overexpressing cells had higher LDHA activity than control bulk spheroid cells (Fig. 7E).
Upon investigating LDHA inhibition in cancer cells, we observed that using LDHA inhibitor AZ-33 considerably hampered endometrial cancer cell viability, especially in cells with ALDH activity (Fig. 7F). Interestingly, while the LDHA inhibitor diminished LDH activity and phospho-p70S6K expression, ALDH expression and its functional activity remained unaltered (Fig. 7G). Furthermore, treatment with AZ-33 led to a marked reduction in stemness indicators such as Nanog, Oct-4, and c-Myc (Fig. 7G). Additionally, activating mTORC1 with MHY1485 could partially counteract the inhibitory effects of AZ-33 on cancer cell proliferation, although MHY1485 in isolation did not make a significant difference (Fig. 7H and Supplementary Fig. S9B and S9C).
Taken together, our findings highlight that ALDH influences mTORC1 through LDHA, promoting the proliferation of endometrial cancer spheroid cells. Notably, while fluctuations in mTORC1 activation remained agnostic to LDHA levels, inhibiting mTOR with everolimus led to a surge in GLUT1. Conversely, stimulating mTOR with MHY1485 reduced GLUT1 levels (Fig. 7I and Supplementary Fig. S9D), influencing glucose transport (Fig. 7J and Supplementary Fig. S9E and S9F). These intricate interplays underscore a reciprocal relationship between glycolysis and mTORC1 in ALDH-active endometrial cancer progression (Supplementary Fig. S10).
LDHA expression is associated with adverse prognosis in endometrial cancer patients
Our study suggests that glycolysis and mTORC1 signaling play a pivotal role in regulating ALDH-high endometrial cancer cells. Seeking to delineate the distribution of ALDH and LDHA in a clinical framework, we performed immunostaining analyses on endometrial cancer samples. Intriguingly, ALDH-positive cells exhibited more pronounced LDHA expression than their ALDH-negative counterparts across both early and advanced cancer stages (Fig. 8A and Supplementary Fig. S11A).
To further elucidate the clinical implications of LDHA, serum LDH levels were quantified in 244 patients with endometrial cancer from our institution. Notably, LDH levels increased in patients with high-grade cancer relative to their low-grade counterparts across all stages, a trend particularly evident in stage I (Fig. 8B and 8C). Moreover, advanced-stage patients consistently exhibited elevated LDH titers in contrast to those in the early stages (Fig. 8D). This underscores a direct correlation between serum LDH levels, tumor grade, and clinical cancer progression.
Delving deeper into the clinical ramifications of LDHA expression, we utilized The Cancer Genome Atlas (TCGA) database (4) to investigate its correlation with the prognosis of patients with endometrial cancer. LDHA mRNA levels were discernibly elevated in high-grade tumors (Fig. 8E). Alarmingly, patients manifesting elevated LDHA expression experienced a significantly reduced overall survival (Fig. 8F, p = 0.02). Moreover, progression-free survival showed a concerning trend, with LDHA-high-expressing cases displaying a tendency toward shorter survival compared with their low-expression counterparts (Supplementary Fig. S11B, p = 0.09). A significant correlation was also evident between LDHA and RPS6KB1 expression in endometrial cancer tissue (Supplementary Fig. S8B, p = 0.01).
In summary, our findings highlight LDHA as a crucial biomarker, revealing its strong association with tumor grade and suggesting its potential role as an indicator of unfavorable prognosis in endometrial cancer.