G9a regulates PTK2 gene expression in NSCLC cells
Through gene expression profilingby RNA-Seq analysis, of which the original data is saved on NCBI GEO website with accessionnumber GSE113493, and gene set enrichment analysis, we found that knockdown of G9a significantlysuppressed gene sets of cell motility and cell adhesion signaling pathways of NSCLC cells, which are critical for cancer invasion and metastasis; notably, PTK2 that encodes FAK protein is among these significantly downregulated genes in the gene sets, suggesting thatPTK2may represent an important G9a target [19]. Tofurther validate the finding and explore the association between G9a and FAK expression, we first knocked down G9a in H1299 and A549 cells with two independent siRNAs. qRT-PCR showed that G9a mRNA expression level was significantly silenced in both H1299 and A549 cell lines transfected with specific G9a siRNAs (Figure 1a,P < 0.01). Simultaneously, mRNA expression of PTK2 gene was down regulated in these two cells (Figure 1b, P < 0.05). As shown in Figure 1c, in both A549 and H1299 cell lines, upon knockdown of G9a, the level of H3K9me2 was decreased, and FAK proteinwas also dramatically decreased in both H1299 and A549 cell lines. These data indicate that FAK expression is associated with G9a expression in NSCLC.
Knockdown and inhibition of G9a suppresses cell migratory and invasive potentialof NSCLC cells
To investigate the potential roles of G9a in cell migration and invasion of NSCLCs, cancer cells were first transfected withtwo different G9a-specific siRNAs for in vitro migration and invasion assays. We observed that cell proliferation was also significantly suppressed (P < 0.01) upon G9a knockdown in these two lung cancer cells (Figure S1a&b). As shown in Figure 2a, compared to the control group, cell migrationpotential was significantly suppressedupon knockdown of G9a in both H1299 (upper panel) and A549 (lower panel) cell lines. A significantlydecreased migrationdistance (P<0.001) was observed in both H1299 and A549 cells upon G9a knockdown (Figure 2b).
Invasionassay wascarried out in G9a-silenced cells. As shown in Figure 2c, cells transfected with G9a siRNA showed lower invasive potentialcompared to cell transfected with the control siRNA in both H1299 (upper panel) and A549 (lower panel) cells.Statistics analysis showed that compared to the controls, the invasive potentialof the G9a-silenced groupsdecreased significantly (P<0.05) in the two NSCLC cells (Figure 2d). To examine if pharmacological inhibition on G9a activity will also suppress the invasive potential of lung cancer, UNC0638, a selected G9a inhibitor, was used to suppress the G9a methyltransferase activity. As shown in Figure 2e, a drastically decrease of H3K9me2protein was found in cancer cells treated with UNC0638, indicating the methyltransferase activity of G9a was inhibited significantly. Similar to the data of G9a knockdown experiment, cell migration in these two cells was also suppressed by UNC0638 treatment (Figure S2a). Compared to the control group, a significant decrease was observed in UNC0638 treated cells (Figure 2f, left panel) in these two cells (P<0.05). Besides, the number of invasive cells in A549 and H1299 cell lines was also significantly decreased by UNC0638 treatment (FigureS2b). Quantitative analysis of invasive data was presented in Figure 2f, right panel(P<0.05). Therefore, above data suggests G9aplays an important role in migratory and invasive potential of NSCLC cell lines.
Inhibition of G9a suppresses the activation of FAK signal pathway in NCSLC
Considering the critical role of FAKin cancer migration and invasion, we hypothesize that G9a may regulate cell invasion and migration through FAK signal pathway. To investigate this underlying mechanism, total protein was extracted from cells either transfected with G9a siRNA or treated with UNC0638. Western blot analysis showed that, compared to control siRNA group, FAK and phosphorylation of FAK (Figure 3a) were drastically decreased in both A549 and H1299 cells upon G9a knockdown. Similarly, after being treated with UNC0638 for 72 hours, total FAK andphospho-FAK (pFAKat Tyr397, an autophosphorylation site on the activatedFAK that is used as an indicator for FAK activation) proteinswere decreasedin the both two cell lines (Figure3b). In contrast, overexpression ofG9a significantly elevated the levels of FAK and pFAK (Tyr397) (Figure 3c). These data indicated that G9a positively regulates the expression of PTK2 gene and activation of FAK signal pathway in NSCLC cells.
Overexpression of G9a enhancescell migratoryand invasive potentialof NCSLC cells
To further validate the role of G9a in migration,invasionand activation of FAK signal pathway of NSCLC cells,we inserted G9a gene into the pcDNA3.1 vector (Figure S2) andexamined if G9a overexpression will enhance the invasion and activation of FAK signaling pathway.Consistently, compared to control cells, we observed overexpression of G9A significantly increased lung cancer cell proliferation (Figure 4Sa&b, P < 0.05). Meanwhile,migration of NSCLC cells (Figure 4a) was significantly increasedwith overexpressed G9a protein (P<0.001,Figure 4b&c). Furthermore, compared to control group, the invasion of NSCLC cells was also increased significantlywithoverexpression of G9a protein (Figure d&e, P < 0.05). These data further demonstrated a key role of G9a in cell invasion, migration as well as activation of FAK signal pathway in NSCLC.
G9a regulates cell migration and invasion through FAKsignal pathway
To investigate whether G9a promotes cell invasion and migration directly or indirectly through activating FAK signal pathway, arescue experiment was designed. In this experiment we investigate if the FAK inhibitor (defactinib) can suppress the G9a enhanced FAK activation and cell invasion in NSCLC cells. As shown in Figure 5a, overexpression of G9a enhanced the phosphorylation of FAK, while FAK inhibitordefactinib attenuated or even completelyabolished the elevated phosphorylated FAK. While cell migration (Figure 5b&c) and invasion (Figure 5d&e) were boosted by overexpression of G9a,similar to the change in phosphorylated FAK, the enhanced migration and invasion was reversed by FAK inhibitorin these two cell lines. Therefore, the above data suggests that the elevated cell invasion by overexpression of G9awas partially abolished by FAK inhibitor, and G9a promoted cell invasion and migration via activating of FAK signal pathway.
G9a activates FAK signal pathway by elevatingNF-kB transcriptional activity
Studies have alreadydemonstrated that FAK was transcriptionally regulated by P53 and NF-κB transcription factors(9). We observed the regulation of FAK expression by G9a in both p53-wildtype A549 and p53-null H1299 cells, therefore, we hypothesized that G9a might activate FAK expression through NF-κB signaling pathway. Therefore, we investigated the effect of knockdown and overexpression of G9a on transcriptional activity ofthe NF-κB-controlled luciferase reporter. Dual-luciferase assays showed that silencing of G9a significantly suppressed NF-κBluciferase activity (Figure 6a, P<0.05), while overexpression ofG9a significantly increased NF-κB activity(Figure 6b, P<0.01) in these two NSCLC cell lines.UNC0638 also significantly suppressed NF-κB luciferase activity in both the cell lines (Figure 6c, P < 0.05). Interestingly, the level of IκBα protein,an inhibitor of NF-κB signaling pathway,was foundto beupregulated by knockdown of G9a anddownregulated by overexpression of G9a (Figure 6d), indicating thatsuppression of G9a on IκBα expression may contribute to the over-activation of NF-κB signaling pathway.
To further investigate whether G9a activates FAK signal pathway through NF-κB, we treated the G9a-overexpressedH1299 cellswith a NF-κB inhibitor,Parthenilide.Western blot analysis showed that NF-κB inhibitor could partially abolish the elevatedphosphorylation of FAK (Tyr397) that wascausedby overexpression of G9a (Figure 6e). Taken together, these data indicatethat G9a activates FAK signal pathway partially through NF-κB signal pathway.
pFAK (Tyr397) level is correlated with G9a in vivo and in NSCLC tissues.
We further investigated the correlation betweenG9a expression and FAK activation inxenografts usingstable G9a-KD H1299 cells. As shown in Figure 7a, tumor tissue was stained with H&E staining. Compared to the xenograft tissues of the controls, the IHC intensities of G9a and H3K9me2 were strongly decreased in G9a-attenuated xenograft tissues. Consistent with the in vitro data, pFAK (Tyr397) levelsweredown-regulated dramatically in G9a-attenuated xenograft tissues, suggesting the activation of FAK signaling pathway was suppressed.
Furthermore, we analyzed the correlation between G9a and FAK expression afterIHC staining of pFAK (Tyr397). IHC analysisdemonstrated nuclear G9a staining(Figure 7b), and quantitative analysis of G9a onIHC slideswas conducted as previously reported(19). IHC analysis showed cytoplasmicpFAK (Tyr397)stainingin tumors and staining was absentinadjacent normal cells. pFAK (Tyr397) IHC staining in the same tissue arrays werequantitatively scored using the same scoring method, andrepresentative images of IHC scoringare shown in Figure 7c. Pearson correlation analysis was used to examine the correlation between G9a and pFAK (Tyr397)IHC staining in these tumor tissues,and the analysis revealed that pFAK (Tyr397)staining was significantly correlated with G9a staining (Figure 7d; R =0.408, P<0.001), indicating overexpression of G9a may enhance activation of FAK signaling pathway and then invasion and metastasis in NSCLC.