3 − 1. Mice
All experiments were conducted on male CBA mice aged between 4 and 6 months. The mice were provided with autoclaved food and boiled water.
3 − 2. Generation of bone marrow-derived mesenchymal stromal cells
Bone marrow was extracted from intact mice's femoral and tibial bones using a glass homogenizer. The cells were then resuspended in cold RPMI 1640 medium. After washing, the cells were cultured in plastic flasks using a complete cell culture medium consisting of RPMI 1640 medium supplemented with 10% foetal calf serum, 2 mM L-glutamine, and antibiotics. All reagents were sourced from Sigma-Aldrich (St. Louis, MI). Non-adherent cells were progressively removed starting from day 3. The spindle-shaped, plastic-adherent MSCs displayed a classical fibroblast-like phenotype and formed a complete monolayer by week 4. The MSCs were collected using a 0.25% versene-trypsin solution, followed by two washes in serum-free medium.
3–3. Tumor Cell Lines
The L929 murine fibroblast cell line, Lewis lung epidermoid carcinoma (LLC), and B16 melanoma cell lines were maintained in RPMI 1640 medium supplemented with 10% FCS, 2 mM L-glutamine, and antibiotics.
3–4. Generation, isolation and characterization of extracellular MVs
Apoptosis of MSCs, L929, LLC, or B16 cells (1 × 106/ml) was induced by cultivating them under conditions of oxygen deprivation in serum-free medium for 24 hours. After cultivation, cell debris was removed by centrifugation at 2000 g for 15 minutes, and the supernatants were subjected to a second centrifugation step at 12000 g for 60 minutes at 4ºC. The cell pellet was resuspended in 100 µl of saline, and the size of Annexin V-positive MVs was determined by flow cytometry using a CytoFlex benchtop flow cytometer (Beckman Coulter Life Sciences, Indianapolis, IN) with TruCOUNT nanoparticles (TC) for bead size calibration, following the manufacturer’s instructions.
3–5. Induction of chronic kidney injury
To induce rhabdomyolysis, a 50% glycerol solution was injected i.m. at a dose of 8.6 mg/kg three times at weekly intervals. Rhabdomyolysis exerted a mixed influence (ischemic, toxic, and retentional) on the kidneys, predominantly damaging the epithelium of the proximal convoluted tubules.
3–6. Treatment of CKI mice with MSCs or MVs
MSCs (2 × 106/mouse) or MVs (derived from 2 × 106 MSCs or approximately 30–50 µg/mouse) were injected intravenously into the tail veins of the experimental mice 3 weeks after the last glycerol administration. The experiments were terminated 11 days after the administration of MSC/MV preparations. The study included six groups, each consisting of ten male mice:
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Control group (mice with CKI without treatment).
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CKI group treated with MSCs.
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CKI group treated with MSC-MVs.
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CKI group treated with L929 cell-derived MVs (L929-MVs).
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CKI group treated with LLC-MVs.
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CKI group treated with B16-MVs.
At least two independent experiments were performed.
3–7. Biochemical analysis
Blood creatinine levels were measured using a BioVision Creatinine (Mouse) ELISA Kit (rev 03/18, cat. No. E4369-100, Abcam, Cambridge, UK). Fatty acid binding protein-1 (FABP1) was determined in the blood using a Mouse/Rat FABP1/L-FABP Immunoassay Quantikine® ELISA (cat. No. RFBP10, R&DSystems, Minneapolis, MN).
3–8. Histological examinations
Murine kidneys were fixed in a 4% formalin solution, followed by standard steps of tissue processing for histopathology, including dehydration and paraffin embedding. Paraffin blocks were cut into 4–5 µm thick sections using a Rotary Microtome (Microm HM 340E; Carl Zeiss, Germany) and stained with haematoxylin/eosin, Sirius red, or according to Mallory's trichrome staining protocol. Light microscopy and microphotography were performed using a light microscope Axioskop 40 (Carl Zeiss, Germany). Morphometric analysis of the histological kidney structure was conducted on paraffin sections by measuring the following morphometric parameters: diameters of superficial renal glomeruli, diameters of renal collecting tubules, and the size of cells in the middle third of the medullary region. Morphometric measurements were taken in one field of view (ocular lens, 10×25; objective lens 63×).
3–9. Flow cytometry.
Murine kidneys or spleens were cut into small pieces using scissors, followed by gentle homogenization in cold Versene solution using a glass homogenizer. The cell suspension was allowed to settle to remove large cell aggregates, after which density gradient centrifugation was performed in a Ficoll-diatrizoate solution (density: -1.082). After centrifugation, cells were collected, thoroughly washed, and counted. Flow cytometry analysis was conducted using a BD FACSCanto™ II Flow Cytometry System (BD International, Heidelberg, Germany) or CytoFLEX (Beckman Coulter, IN, USA) Flow cytometers with anti-murine CD4-FITC, CD44-PE, CD4-APC, CD25-FITC, and FoxP3-PE antibodies (BD Biosciences, San Jose, California), following the manufacturer's instructions
3–10. Statistics
Data analysis was performed using Graph Prism 8 and one-way ANOVA. Significant differences between groups were assessed using Student's test or Šidák’s multiple comparison test. A p-value < 0.05 was considered significant.