Background: Multidetector computed tomography (CT) images of the liver can be obtained rapidly, and parenchymal lesions can be detected using an iodine-containing contrast medium. In such imaging, the time to peak enhancement is important for optimal lesion detection. When using the bolus tracking system (BTS), the CT commences after a threshold Hounsfield unit value is reached. Methods: In current BTS, contrast medium is injected into blood vessels at a high speed using an automated injector; however, it may cause movement in the vessel in which the region of interest (ROI) is set, so that the timing of the scan is affected, leading to indeterminate artery and portal phase in angiography or liver dynamic examination. We therefore aimed to identify the cause of failure of CT due to an error in BTS and to suggest an appropriate preventive method. Results: Subjects underwent BTS-CT angiography and abdominal examinations in two university hospitals using a 64-detector CT scanner. An automatic BTS was used to time the start of the scanning when the injected contrast medium reached the threshold level in the ROI. Errors in bolus tracking were divided into patient-related and machine-related errors. Among 2,000 patients who underwent BTS-CT, error was observed in 15 cases, in which the bolus tracking timing was shifted as a result of movement of the patient or respiratory changes due to the rapid injection of contrast medium, which led to CT failure. Conclusions: To reduce CT-BTS failures, the patient's position and the change in the position of the blood vessels due to the patient's breathing pattern should be carefully considered, and the ROI should be set to a sufficiently small area in the blood vessel.