As a degenerative disease, OA is associated with a poor quality of life and can eventually lead to a loss of the ability to work [60–62]. However, its pathogenesis and risk factors are not clear. Most research has focused on chondrocytes, osteoblasts, and osteoclasts. The synovium is relatively less well-studied, despite its importance in the occurrence and development of OA. Some studies have shown that the synovial tissues of patients with OA have a higher proliferative capacity than those of healthy individuals, in addition to greater inflammatory changes and obvious synovitis [16, 63, 64]. One study revealed that synovitis mediates the loss of cartilage and worsening pain, every 0.1 mm of cartilage lost over 24 months corresponded to a Western Ontario and McMaster Universities Osteoarthritis Index (WOMAC) pain subscale score of 0.32 (95% CI 0.21–0.44) [65]. Therefore, the pathological changes in synovial tissue and synovial cells may have important implications for cartilage and OA.
We analyzed 30 patients with OA and 29 normal controls based on three datasets in GEO and identified 662 upregulated genes and 410 downregulated genes in OA. After obtaining the intersection of the three sets, we detected 64 upregulated genes and 84 downregulated genes in OA. The six proteins encoded by MYC, IL6, VEGFA, JUN, ATF3, and PTGS2 had more interactions based on a PPI network analysis and were closely associated with OA based on a ROC curve analysis. These are candidate biomarkers and may have important roles in OA. GO and KEGG pathway enrichment analyses revealed that the DEGs were involved in the MAPK signaling pathway. Based on the intersection between the MAPK signaling pathway and our DEG set, we obtained 12 indicators related to MAPK with significant expression differences in OA. Combined with the six key indicators of OA identified in the DEG analysis, three important targets were obtained, namely JUN, MYC, and VEGFA. our investigation has substantiated the pivotal involvements of Jun, c-Myc, and VEGFA in the context of Osteoarthritis (OA), employing rigorous bioinformatics methodologies. This alignment with antecedent research outcomes reinforces the robustness of our findings. Nonetheless, it is noteworthy that prior inquiries have predominantly directed their focus towards chondrocytes or immunologically relevant cell populations, with scant emphasis on analyses pertinent to synovial tissue. In stark contrast, our study uniquely concentrates on the disparate gene expression profiles inherent to synovial tissue, thereby yielding a more authentic portrayal of synovial tissue dynamics. Importantly, the delineation of our investigation is confined to the domain of gene expression profiles specific to synovial tissue, a strategic choice that renders a more accurate depiction of the nuanced alterations within the synovial microenvironment. Concurrently, it's pertinent to acknowledge that the majority of antecedent investigations have been predominantly confined to the realm of bioinformatic outputs, often lacking the pivotal facet of experimental corroboration. In a concerted endeavor to advance the clinical dimensions of Osteoarthritis diagnosis and therapeutic interventions, a cohort of 30 human synovial tissue samples was meticulously procured for rigorous experimental validation. Through the judicious application of a multi-modal approach encompassing Quantitative Polymerase Chain Reaction (QPCR), Western blotting, and immunohistochemistry, we meticulously scrutinized the variations in Jun, c-Myc, and VEGFA expression profiles at both the RNA and protein levels. This comprehensive experimental undertaking effectively addresses the extant dearth in empirical validation, particularly within the context of human samples. Moreover, our empirical findings serve to establish a more robust foundation, thus potentiating enhanced precision in the clinical diagnosis and therapeutic stratagems targeting Osteoarthritis.
In pursuit of a more comprehensive comprehension of the intricate interplay among multiple differentially expressed genes, an exhaustive investigation was conducted. Through an exhaustive analysis of pertinent literature, it became evident that Jun, c-Myc, and VEGFA exhibit pronounced associations with the Mitogen-Activated Protein Kinase (MAPK) pathway. Significantly, the MAPK signaling cascade is intrinsically implicated in the progression of Osteoarthritis (OA). In its basal state, the MAPK pathway comprises three distinct signaling cascades, namely, c-Jun N-terminal kinase (JNK), p38, and extracellular signal-regulated kinase (ERK) pathways [37]. Activation of the MAPK pathway elicits the transcriptional upregulation of proinflammatory cytokines including tumor necrosis factor (TNF), interleukins (IL)-1, IL-6, alongside select chemokines. Furthermore, this activation prompts the expression of matrix metalloproteinases (MMPs) such as MMP-1, MMP-13, and cyclooxygenase-2 [38–40]. Evidently, MAPK activation significantly contributes to cartilage collagen degradation, chondrocyte apoptosis, and inflammatory processes characteristic of OA [41–43]. Perturbation of the MAPK signaling pathway engenders aberrant synovial tissue proliferation, inflammation, and the development of heterogeneous pannus across the synovium. It is noteworthy that p38, an integral component of the MAPK pathway, is implicated in the pathogenesis of OA. Constituting a pivotal link in transmitting extracellular cues to cellular entities, the p38-MAPK pathway orchestrates a cascade involving diverse kinases. Of particular import are MAPKK3 and MAPKK6, major facilitators of p38-MAPK activation [66]. Recent inquiries have highlighted the potential influence of miR-24 on OA cells through modulation of the MAPK pathway via its interaction with c-Myc. This interaction contributes to the modulation of interleukin-1β (IL-1β) production, a process facilitated by the p38-MAPK pathway [67]. Additionally, compelling evidence suggests that the absence of PCAT-1 in head and neck squamous cell carcinoma cells confers growth inhibition and apoptosis induction via the inhibition of c-Myc and concurrent activation of Ask1-mediated p38-MAPK signaling [68]. Further augmenting this narrative, VEGFA, a prominent pro-angiogenic factor governing endothelial cell proliferation, differentiation, and migration, assumes pivotal significance. Operating as a dimeric glycoprotein, VEGFA spurs angiogenesis through its engagement with the tyrosine kinase receptor KDR (VEGFR2), thereby inciting the activation of the p38-MAPK signaling cascade [70]. MIR452 emerges as a noteworthy participant, adept at impeding the KRAS-BRAF-MAPK signaling axis by downregulating VEGFA expression and attenuating VEGFA binding to VEGFR2, thereby curtailing angiogenesis [71]. Notably, the VEGFA/VEGFR2 interplay substantiates the migration of human Dental Pulp Stem Cells (hDPSCs) through the p38-MAPK signaling route [72]. In a distinct avenue of exploration, FGF21 emerges as an agent capable of inhibiting Peripheral Nervous System (PNS) myelination via p38-MAPK-induced activation of c-Jun. This inhibition is substantiated by discernible reductions in c-Jun expression and phosphorylation upon specific inhibition of the p38-MAPK pathway through SB203580 [73, 74]. Collectively, it is conjectured that p38-MAPK wields considerable influence in the context of the disparate expression patterns exhibited by Jun, c-Myc, and VEGFA in the context of OA. To fortify this notion, human synovial tissues were employed for an exhaustive analysis of p38-MAPK protein expression levels. The combined utilization of Western Blot analysis and immunohistochemistry discerned a noteworthy increase of approximately 1.5-fold in p38-MAPK expression within synovial tissues obtained from OA-afflicted patients, in comparison to their normative counterparts. While this substantiated the differentially expressed p38-MAPK in the OA context, no commensurate shifts in the expression profiles of Jun, c-Myc, and VEGFA were observed subsequent to p38-MAPK intervention, thereby precluding a conclusive determination of their interdependent regulatory associations. This critical void forms the crux of our impending research investigations.