2.1. Materials and animals
We obtained pregnenolone, progesterone, and dimethyl sulfoxide (DMSO) from Sigma-Aldrich (St. Louis, MO, USA). Bromuconazole (CAS#116255-48-2, Cat#G21120100, purity of 98.8%) and etaconazole (CAS#60207-93-4, Cat#0492103 with a purity of 97.4%) were acquired from TM Standard (Shanghai, China). Epoxiconazole (CAS#133855-98-8, Cat#2030600, purity of 98.5%) was sourced from Yuanye (Shanghai, China). Climbazole (CAS#38083-17-9, Cat#001906, purity of 98%) and systhane (CAS#88671-89-0, Cat#M796746, purity of 99.9%) were obtained from Mackin (Shanghai, China). Cyproconazole (CAS#94361-06-5, Cat#C11300887, purity of 98%), propiconazole (CAS# 60207-90-1, Cat#P114492, purity of 99.9%), and triadimefone (CAS#43121-43-3, Cat#BWY395929, purity of 97%) were acquired from Aladdin (Shanghai, China). Carbendazole (CAS#10605-21-7, Cat#513039, purity of 98%) was obtained from J&K (Shanghai, China). Pregnant Sprague-Dawley rats weighing 250–300 g were obtained from the Shanghai Laboratory Animal Center (Shanghai, China). The rat placentas were harvested from the dams on gestational day 20 following CO2 euthanasia. The use of animal subjects was approved by the Experimental Animal Ethics Committee of Wenzhou Medical University, and all experimental procedures were performed in accordance with the guidelines outlined in the Manual for Nursing and Experimentation with Laboratory Animals. Human full-term placentas were obtained from the Second Affiliated Hospital of Wenzhou Medical University, and their acquisition was conducted under the oversight and direction of the Clinical Research Committee of Wenzhou Medical University (protocol number: 2022-K-81-01).
2.2. Microsomal preparation
To prepare microsomes, we sourced samples from both human and rat placentas, adhering to an established methodology (Xu et al. 2016). The placental tissue was sliced and homogenized through homogenization in a solution comprising 0.01 M PBS (pH 7.2) and 0.25 M sucrose. Subsequently, the homogenate underwent a series of centrifugation steps, including rotations at 700×g for 30 min, 14,500×g for 30 min, and 105,000×g for 1.5 hr. The resultant pellet containing proteins was reconstituted in PBS. Subsequently, the protein concentration was determined using the BCA protein kit (Cat # P0010, Beyotime Biotech Inc, Shanghai, China), following the manufacturer's guidelines.
2.3. Detection of h3β-HSD1 and r3β-HSD4 activity in microsomes
The presence and activity of h3β-HSD1 and r3β-HSD4 in microsomes were assessed according to the previously described protocol (Li et al. 2023). In brief, a basic 3β-HSD reaction contained 2 µg of microsomes, P5 and 0.2 mM NAD+ in 100 µl of PBS (0.01 M, pH 7.2) in a 1.5 mL Eppendorf microtube and the microtube was then placed in a shaking water bath set at 37°C and 75 rpm for reaction. First, Michaelis-Menten (MM) kinetics analysis was performed in the basic reaction comprising 0–1 µM P5 for 30 min. Second, for the initial screening, a solution of an azole fungicide dissolved in DMSO was added to the reaction mixture as a control, with a concentration of 100 µM in the reaction containing 0.2 µM P5 in the basic reaction for 30 min. Third, for dose response assay, a setup comprised 0.2 µM P5 and varying concentrations (0-100 µM) of a fungicide in the basic reaction for 30 min was performed. Lastly, for mode action (MOA) assay, 0–1 µM P5 and varying concentrations (0-100 µM) of a fungicide in the basic reaction for 30 min were performed. After incubation, the reaction was stopped by adding 10 µL of an internal standard called testosterone-d5 (T-d5) (Shanghai Zzbio Co., China) and 200 µL of acetonitrile (Merck Supelco, PA, USA) to the reaction mixture. The microtube was then vortexed and centrifuged at 12,000 ×g for 10 min. Following centrifugation, 100 µL of the supernatant was transferred to a sample bottle, and 10 µl of the sample was injected for analysis using HPLC/MS-MS assay.
2.4. P4 quantification via HPLC-MS/MS analysis
P4 levels were quantified utilizing state-of-the-art Ultra Performance Liquid Chromatography-Tandem Mass Spectrometry (UPLC-MS/MS) techniques. The analysis was conducted on the Acquire UPLC system (Waters, USA), equipped with an Acquire BEH C18 column (2.1 mm × 50 mm, particle size: 1.7 µm), adhering to the established protocol (Li et al. 2023). Detection and quantification were executed employing the XEVO TQD triple quadrupole mass spectrometer (Waters, USA) with electrospray ionization (ESI). The mass spectrometer was configured to operate in the Multiple Reaction Monitoring (MRM) mode, utilizing unit mass resolution for precise detection. Masslynx 4.1 software facilitated data acquisition and instrument control throughout the analysis process. Quantitative assessment of P4 levels was achieved via the standard curve method with the internal standard (IS) serving as the reference compound. This rigorous approach ensured accurate determination of P4 concentrations in the samples analyzed.
2.5. Calculation of enzymatic parameters
In the analysis of MM kinetics, we utilized the equation (\(\:\text{v}=\text{V}\text{m}\text{a}\text{x}\frac{\left[\text{P}5\right]}{\text{K}\text{m}+\left[\text{P}5\right]}\:\)) for nonlinear regression analysis in GraphPad software 9.5 (GraphPad Inc., CA, USA) to determine the values of MM kinetics constant (Km) and maximum velocity (Vmax). When conducting a screening assay for fungicides, the residual activity (R) was calculated relative to the control tube (DMSO), which was considered as 100%. To investigate the dose response of a fungicide, the IC50 value was determined using the equation: \(\:\text{R}=\frac{100}{1+10{\:}^{-\left(\left(\text{L}\text{o}\text{g}\left[\text{i}\right]-\text{L}\text{o}\text{g}\text{I}\text{C}50\right)\right)}}\), where [i] is the inhibitor’s concentration. For the Enzyme kinetics inhibition (mixed model) assay, the equations were employed to calculate Ki values:\(\:\text{V}\text{m}\text{a}\text{x}\text{A}\text{p}\text{p}=\frac{\text{V}\text{m}\text{a}\text{x}}{1+\frac{\left[\text{i}\right]}{\text{K}\text{i}}},\:\:\text{K}\text{m}\text{A}\text{p}\text{p}=\text{K}\text{m}\frac{1+\frac{\left[\text{i}\right]}{\text{K}\text{i}}}{1+\frac{\left[\text{i}\right]}{\text{K}\text{i}}}\), \(\:\text{a}\text{n}\text{d}\:\text{v}=\text{V}\text{m}\text{a}\text{x}\text{A}\text{p}\text{p}\frac{\text{X}}{\text{K}\text{m}\text{A}\text{p}\text{p}\:+\:\text{X}}\:\), where VmaxApp is apparent Vmax, KmApp is apparent Km, Ki a inhibition constant, and α is the digital number for determination of MOA. A “α = 1” denotes noncompetitive inhibition; α > 1 or α < 1 signifies mixed inhibition; α approaching 0 indicates uncompetitive inhibition; α > \(\:{\text{e}}^{10}\)suggests the competitive inhibition. A Lineweaver-Burk plot was generated to validate the MOA.
2.6. Investigation of JAr cell culture and P4 production
Human choriocarcinoma JAr cells obtained from ATCC (USA) were cultivated following the established protocol (Li et al. 2023). The JAr cells were incubated in RPMI-1640 medium supplemented with 10% heat-inactivated fetal calf serum (Invitrogen, USA). The cell cultures were maintained at a constant temperature of 37°C within a humidified atmosphere enriched with 5% CO2. Upon achieving 80% confluence during exponential growth, the cells were subjected to treatment with varying concentrations of azole fungicides, ranging from 0 up to 80 µM, for 24 hrs. Subsequent to the treatment regimen, the cell culture supernatants were harvested for P4 level assessment as above.
2.7. Analysis of the correlation between the structural properties and IC50
A comprehensive and searchable database called ZINC database was utilized for this analysis (Irwin and Shoichet 2005). The database contained various chemical structural features such as LogP (lipophilicity), molecular weight (MW, d), apolar desolvation energy (AD, kcal/mol), polar desolvation energy (PD, kcal/mol), HB donor number (HBD), HB acceptor number (HBA), rotatable bond count, heavy atom count, hetero atom count, topological polar surface area (PSA, Å2), and Fsp3. The obtained data from the above-mentioned analyses were then subjected to bivariate correlation analysis to explore the potential relationships between the structural properties of the fungicides and their IC50 values.
2.8. 3D-QSAR analysis
Compound data was gathered and separated into a training dataset [20 chemicals, comprising various compounds, including curcuminoids (Sang et al. 2023a), insecticides (Li et al. 2023; Zhai et al. 2023), disinfectants (Li et al. 2023), hormones (Tang et al. 2022), and resveratrol derivatives (Su et al. 2023) in this investigation, Table S2] and a validation dataset (comprising azole fungicides in this study) to construct a 3D-QSAR pharmacophore model. Within the training dataset, three categories of molecular attributes - hydrogen bond acceptor (HBA) and hydrogen bond donor (HBD), and hydrogen bond acceptor lipid (HBA_lipid) - were identified for the formulation of a theoretical pharmacophore. The HypoGen algorithm in DS3.5 was employed to produce a series of theoretical pharmacophores based on the essential molecular features and potency values of the molecules in the training dataset. A common reference frame was established in alignment with the structural resemblance of ligands or the active site of the target protein, giving rise to the generation of the pharmacophore hypothesis. This hypothesis focused on identifying the shared characteristics among ligands that played a role in inhibiting h3β-HSD1, encompassing HBD, HBA, and HBA_lipid. Through the evaluation of the positions and orientations of these features in relation to the aligned ligands, ten pharmacophore models were developed (Table S1). Validation of the pharmacophore model was conducted to confirm its effectiveness in predicting the activities of novel ligands through correlation and RMSD analysis. A "Fit value" was calculated using the formula: Fit = sum of mapped features f of weight(f) [ 1 - SSE(f)], where SSE(f) = sum over location constraints c on f of ( D ( c) / T ( c))2, with D representing the displacement of the feature from the centre of the location constraint, and T indicating the radius of the location constraint sphere for the feature (tolerance). A higher fit value denotes a more optimal fitting outcome. The experimental and predicted activities of 20 training set compounds calculated on the basis of the 3D-QSAR-derived Hypo1 model were listed in Table S2.
2.9. Molecular docking investigation of h3β-HSD1 and r3β-HSD4
The structural elucidation of h3β-HSD1 and r3β-HSD4 was conducted employing the Swiss-Model homology modelling platform, accessible online at https://swissmodel.expasy.org, since the crystal structures of both enzymes were not available. For h3β-HSD1, modelling was predicated on the crystalline framework of MoeE5 (PDB id: 6kv9), bound with UDP-glucuronic acid and NAD+ (Sun et al. 2020). Conversely, the structure of r3β-HSD4 was modeled using the Swiss-Model homology modelling engine, leveraging the crystal structure of dTDP-D-glucose 4, 6-dehydratase (PDB id: 1kew) (Allard et al. 2001). Comparison of primary sequence and 3D structural similarities between h3β-HSD1 and r3β-HSD4 was accomplished using Chimera software (version 1.1.0, UCSF, San Francisco, CA). To ascertain the structural integrity of the enzyme models, a Ramachandran plot analysis was executed utilizing Discovery Studio Client v19 (Accelrys Inc., San Diego, CA), as previously described (Ongtanasup et al. 2022). Docking simulations involving a paraben with h3β-HSD1 and r3β-HSD4 were performed employing Autodock 4.0 (Scripps Research Institute, CA, http://autodock.scripps.edu). Ligands were prepared utilizing AutoDock Tools. Binding affinities and energies of each ligand were computed and juxtaposed. The configuration of the docked fungicide with lowest binding energy (ΔG) was presented.
2.10. Statistical analysis
The study was repeated 3–4 times. An ANOVA was employed to analyze the enzyme outcomes, followed by a post-hoc Dunnett's multiple comparisons test to identify any notable variances. Pearson correlations were utilized in bivariate analyses to evaluate the connection strength between the characteristics of azole fungicides and their corresponding IC50 values. Significant variances were indicated as * for p < 0.05, ** for p < 0.01, and *** for p < 0.001. The results are presented as the mean ± standard error of the mean (SEM) for residual activity and MM kinetics or mean ± standard deviation (SD).