CMTM6 is differentially expressed in a variety of tumors and leads to poor prognosis in patients with liver cancer
Pan-cancer analysis of CMTM6 was conducted using the TIMER database. The study found that in bladder urothelial carcinoma (BLCA), breast cancer (BRCA), colon cancer (COAD), esophageal cancer (ESCA), renal papillary cell carcinoma (KIRP), hepatocellular liver cancer (LIHC), lung squamous carcinoma (LUSC), prostate cancer (PRAD), gastric adenocarcinoma (STAD), and thyroid cancer, the expression level of CMTM6 in tumor tissues was higher than that in adjacent normal tissues (THCA). Conversely, in chromophobe cell carcinoma of the kidney (KICH), the expression level of CMTM6 was lower in tumor tissues compared to adjacent normal tissues. However, no significant difference in CMTM6 expression level was observed between tumor tissues and adjacent normal tissues in cervical squamous cell carcinoma (CESC), bile duct carcinoma (CHOL), head and neck squamous cell carcinoma (HNSC), renal clear cell carcinoma (KIRC), lung adenocarcinoma (LUAD), pancreatic cancer (PAAD), rectal adenocarcinoma (READ), and endometrial carcinoma (UCEC), as shown in Fig. 1A. Verification through the GEPIA database revealed that the expression level of CMTM6 in liver cancer tissues was significantly higher than that in adjacent normal tissues (P < 0.001), as shown in Fig. 1B. Furthermore, prognosis analysis of liver cancer patients indicated that increased expression of CMTM6 in liver cancer tissues was associated with poor prognosis, as shown in Fig. 1C.
CMTM6 expression is upregulated in liver cancer and leads to poor prognosis
Immunohistochemical analysis of tumor tissues and adjacent normal tissues from 60 liver cancer patients revealed that CMTM6 was expressed in the cell membrane and cytoplasm (Fig. 1D). The positive expression rate of CMTM6 was approximately 61.7% in tumor tissues and 25.0% in adjacent normal tissues (Fig. 1E). Statistical analysis demonstrated a significantly higher expression level of CMTM6 in cancer tissues compared to adjacent tissues (χ2 = 5.288, P = 0.021) (Fig. 1F).
Correlation analysis between the expression level of CMTM6 and clinicopathological features in liver cancer tumor tissues showed a significant association with the preoperative AFP level (χ2 = 6.287, P = 0.041) and the degree of tumor differentiation (χ2 = 7.855, P = 0.042) (Table 1). Logistic regression analysis revealed that the preoperative AFP level and tumor differentiation degree were risk factors for CMTM6 expression and positively correlated with its expression level (Table 2). Follow-up analysis of 60 patients indicated that up-regulation of CMTM6 expression was associated with a decrease in relapse-free survival time (P = 0.024) (Fig. 1G). Consequently, CMTM6 expression is upregulated in liver cancer tissues and is indicative of poor prognosis in patients.
CMTM6 promotes the proliferation of hepatoma cells
Normal liver cells (Lo2) and liver cancer cells (HepG2, HuH-7, MHCC97H) were cultured to investigate the expression levels of CMTM6. qRT-PCR was used to detect CMTM6 levels in both normal liver cells and liver cancer cells (Fig. 2E). The expression level of CMTM6 was significantly higher in hepatocellular carcinoma cells (HepG2, HuH-7, and MHCC97H) (3.321 ± 0.815, 3.151 ± 0.543, and 3.161 ± 0.492) compared to normal liver cells (Lo2, 31.011 ± 0.169), and this difference was statistically significant (P < 0.05). Refer to Fig. 2A and 2B for detailed information. Further qRT-PCR analysis revealed that the expression level of CMTM6 was highest in HepG2 cells among the three HCC cells, thus making it the focus of subsequent studies. Following infection of cells with 3 target shrnas and negative control shRNA viruses, the expression level of CMTM6 was verified through qRT-PCR. The results demonstrated that the expression level of CMTM6 in the Blank group and shRNA-NC group (1.014 ± 0.183, 1.002 ± 0.161) was significantly higher than that in the CMTM6SH1 group, CMTM6SH2 group, and CMTM6 group. The expression of CMTM6 in the sh3 group was 0.411 ± 0.240, 0.616 ± 0.152, and 0.437 ± 0.161, respectively, and these differences were statistically significant (P < 0.05), indicating a successful knockout effect (Figs. 2C and 2D). The knockout effect of the CMTM6 sh1 group was the most pronounced, and this target was selected for WB and other experiments.
CCK8 was used to measure cell proliferation in each group (Fig. 3C). The survival rates of the Blank group, hRNA-NC group, CMTM6-shRNA group, CMTM6-OE group, and Vector group were 100.000 ± 7.205%, 98.196 ± 5.422%, 44.041 ± 5.845%, 154.514 ± 3.087%, and 95.150 ± 6.4%, respectively (Fig. 3A). Upon analysis, it was observed that compared to the Blank group and the shRNA-NC group, the cell survival rate significantly decreased after CMTM6 knockout, while the cell survival rate significantly increased in the CMTM6 overexpression group, with statistical significance (P < 0.05) (Fig. 3B). In conclusion, CMTM6 has a biological function in promoting the proliferation of hepatoma cells.
The subcutaneous transplantation tumor model of CMTM6-silenced/overexpressed mouse liver cancer was constructed and divided into three groups: the model group, CMTM6-OE group, and CMTM6-shRNA group (Fig. 4A). Daily recording of subcutaneous tumor size showed that the growth rate of subcutaneously transplanted tumors in the CMTM6-OE group was significantly higher than that in the CMTM6-shRNA group (Fig. 4C). After sacrificing the mice, the subcutaneously transplanted tumors were dissected for detection. The tumor weight in the CMTM6-OE group was significantly higher than that in the CMTM6-shRNA group, with statistical significance (P < 0.05) (Fig. 4B). In summary, our findings suggest that CMTM6 plays a role in promoting the occurrence and development of liver cancer cells.
CMTM6 inhibits apoptosis of hepatoma cells
The number of apoptotic cells in each group was determined using flow cytometry (Fig. 3F). The apoptosis rates for the Blank group, CMTM6-shRNA group, CMTM6-OE group, and Vector group were 4.450 ± 1.527%, 4.960 ± 1.123%, 22.290 ± 2.187%, and 3.670 ± 0.141%, respectively (Fig. 3D). The analysis revealed that the apoptosis of cells significantly increased after CMTM6 knockout compared to the blank group and the negative control group. Conversely, the apoptosis of cells in the CMTM6 overexpression group significantly decreased (P < 0.05) (Fig. 3E). In conclusion, CMTM6 has a biological function of inhibiting the apoptosis of hepatoma cells.
There is a correlation between the expression of CMTM6 and β-catenin in liver cancer
Studies have found that Wnt1 and β-catenin play key roles in the Wnt/β-catenin pathway and influence signal transmission within the pathway [14]. To further investigate the regulatory mechanism of CMTM6 in liver cancer, immunohistochemical analysis was conducted on cancer tissues and adjacent tissues from 60 liver cancer patients. The results revealed that Wnt1 was expressed in the nucleus (Fig. 5A), but there was no significant difference in its expression level between cancer tissues and adjacent control tissues (χ2 = 0.287, P = 0.592, Fig. 5B, 5C). Moreover, there was no significant correlation between Wnt1 expression and relapse-free survival (Fig. 5I). On the other hand, β-catenin was expressed in both the cytoplasm and nucleus (Fig. 5E), and its expression level in cancer tissues was significantly higher than that in adjacent tissues (χ2 = 2.732, P = 0.009, Fig. 5F, 5G). The up-regulation of β-catenin expression was associated with a decrease in recurrence-free survival time for patients (Fig. 5J). Correlation analysis indicated a positive correlation between the expression levels of CMTM6 and β-catenin in tumor tissues (χ2 = 4.671, P = 0.031, Fig. 5H), but no significant correlation was observed with Wnt1 (χ2 = 0.006, P = 0.936, Fig. 5D). In conclusion, there may be a regulatory relationship between CMTM6 and β-catenin in liver cancer tissues.
CMTM6 promotes the proliferation and development of liver cancer cells through the Wnt/β-catenin pathway
β-catenin is a core protein in the Wnt/β-catenin signaling pathway [14]. To further investigate the relationship between CMTM6 and β-catenin, enrichment analysis of CMTM6 was conducted using GSEA and KEGG. The results suggested that CMTM6 may have a regulatory relationship with Wnt/β-catenin (Fig. 6A, 6B). The expression levels of Wnt1 in the Blank group, shRNA-NC group, CMTM6-shRNA group, Vector group, and CMTM6-OE group were 1.055 ± 0.339, 1.019 ± 0.095, 0.614 ± 0.066, 1.101 ± 0.441, and 1.7, respectively, as detected by qRT-PCR (88 ± 0.330). Similarly, the expression levels of β-catenin were 1.079 ± 0.212, 1.028 ± 0.079, 0.506 ± 0.079, 1.180 ± 0.360, and 1.967 ± 0.303, respectively (Fig. 6C). Statistical analysis revealed that compared to the blank group and the negative control group, the CMTM6 knockout group showed significantly reduced expression levels of CMTM6, Wnt1, and β-catenin, while the CMTM6 overexpression group exhibited significantly increased expression levels of these proteins, with statistical significance (P < 0.05) (Fig. 6E, 6F, 6G). Western blot detection also demonstrated that the expression levels of CMTM6, Wnt1, and β-catenin proteins were significantly higher in the CMTM6 overexpression group compared to the blank group and the negative control group (Fig. 6D). In conclusion, our findings suggest that CMTM6 may play a role in promoting the proliferation and development of liver cancer by regulating the Wnt/β-catenin pathway through β-catenin.
The expression level of CMTM6 in hepatocellular carcinoma is correlated with immune infiltration of tumor-associated neutrophils
To further explore the mechanism of CMTM6 in promoting liver cancer, we analyzed the relationship between CMTM6 expression and immune cell infiltration (B cells, CD4+ T cells, CD8+ T cells, DC, neutrophils, and macrophages) using the TIMER database. Our analysis revealed that the expression level of CMTM6 was positively correlated with neutrophil immunoinfiltration (r = 0.383, p = 1.58e − 13), B lymphocytes (r = 0.218, p = 4.67e − 5), and CD8+ T cells (r = 0.149, p = 5.81e − 3). Furthermore, CD4+ T cells (r = 0.386, p = 1.09e − 13), macrophages (r = 0.367, p = 2.50e − 12), and dendritic cells (r = 0.268, p = 5.30e − 07) also showed a positive correlation with immunoinfiltration, as depicted in Fig. 7A.
To validate these findings, we performed immunohistochemical detection of the neutrophil marker CD66b in 60 liver cancer tissues. The results showed that CD66b was expressed in the cell membrane and cytoplasm (Fig. 7B), and its expression was up-regulated in cancer tissues (Fig. 7C). Moreover, CD66b expression was found to be positively correlated with CMTM6 expression (χ2 = 24.825, P = 0.001, Fig. 7D). However, there was no correlation between high expression of CD66b and relapse-free survival (P = 0.856), as shown in Fig. 7E. In conclusion, our findings suggest that CMTM6 plays a role in promoting tumor-associated neutrophil immune infiltration in hepatocellular carcinoma.