2.1. Clinical samples and ethics statement.
A total of 75 patients with DTC were included in the study, and the patients' cancer and paired paracancerous tissues were collected. The subjects were obtained from the Department of Thyroid Surgery, Xiangya Medical College Cancer Hospital, Central South University/ Hunan Provincial Cancer Hospital and the Department of Thyroid Surgery, Zhengzhou Central Hospital, Zhengzhou University. Inclusion criteria: 1) Diagnosis of DTC was confirmed by intraoperative pathology; 2) complete and available data; 3) good compliance; 4) no preoperative radiotherapy; and 5) age over 18 years old. Exclusion criteria: 1) violation of the above inclusion criteria; 2) history of other cancers and surgeries; 3) other thyroid diseases; 4) other co-morbid major or infectious diseases; 5) women who were in the period of pregnancy and breastfeeding; and 6) previous exposure to radioactive sources. According to the inclusion and exclusion criteria, all patients included signed the Informed Consent Form. The study complied with the principles outlined in the Declaration of Helsinki and was reviewed and approved by the Ethics Committee of the Cancer Hospital/Hunan Cancer Hospital, Xiangya School of Medicine, Central South University, with the ethical approval number (NO: SBQLL-2016-015).
2.2. Cell culture.
The human-derived papillary thyroid cancer cell line BCPAP and the human-derived follicular thyroid cancer cell line WRO were used in this study.BCPAP cells were purchased from the Cell Bank of the Chinese Academy of Sciences (CAS), and WRO cells were obtained from the Second Xiangya Hospital of Central South University. The differentiated thyroid cancer cell line BCPAP was treated with 10% FBS (Biological Industries, Israel) supplemented with 1% sodium pyruvate (Invitrogen, USA), 1% NEAA (Invitrogen, USA), 1% glutamine ( Invitrogen, USA), 1% NEAA (Invitrogen, USA), 1% glutamine ( Invitrogen, USA) in RPMI-1640 medium (Hyclone, USA).WRO cells were cultured in RPMI-1640 medium with 10% FBS. The cells were placed in a cell culture incubator at 37°C, 5% CO2.
2.3. Transfection.
Mimic and inhibitor were transfected using the Lipofectamine® RNA iMAX kit (Invitrogen, USA). Cell transfection was performed when the cell confluence in the culture plate was about 40–50% according to the manufacturer's instructions. miR-27a-5p mimic and mimic-NC, miR-27a-5p inhibitor and inhibitor-NC were purchased from RiboBio (Guangzhou, China). Plasmids were transfected using the Lipofectamine™ 3000 kit (Invitrogen, USA). The transfection operation was performed when the cell confluence in the culture plate was about 70–80% according to the manufacturer's instructions.
2.4. Reverse transcriptase quantitative PCR.(qRT-PCR).
To analyze the relative expression levels of SREBP1 and miR-27a-5p, total RNA was extracted from tissues and cells using TRIzol™ Reagent (TaKaRa, Japan), and RT-qPCR was performed according to the instructions of the Fluorescence Quantification Kit (TaKaRa, Japan).Relative expression of SREBP1 and miR-27a-5p The 2®-ΔΔCT method was used, with β-actin or U6 as endogenous controls. Primer sequences are shown in Supplementary Table. 1.
Table 1
Gene Name | Primer Sequences |
SREBF1-F | 5′-TTGCCGACCCTGGTGAGT-3′ |
SREBF1-R | 5′-AATGGCGTTGTGGGCTGT-3′ |
β-actin-F | 5′-CCTGGCACCCAGCACAAT-3′ |
β-actin-R | 5′-GGGCCGGACTCGTCATAC-3′ |
miR-27a-5p | 5′-AGGGCTTAGCTGCTTGTGAGC-3′ |
U6-F | 5′-ATTGGAACGATACAGAGAAGAATT-3′ |
U6-R | 5′-GGAACGCTTCACGAATTTG-3′ |
2.5. Western blot.
Cells were collected 24h after transfection, and the total protein of lysate cells was added for extraction, and the protein concentration was determined by BCA kit (Beyotime, China). Western-blot SDS-PAGE gels were prepared with a loading volume of 30 µg per well, and membrane transfer was performed after electrophoresis. The end of membrane transfer was closed with 5% skimmed milk. Add SREBP1 (1:500) primary antibody (Santa Cruz, USA), β-Actin primary antibody (1:3000) (Santa Cruz, USA) and incubate overnight in the refrigerator at 4°C. Wash with TBST for 3 times, and then add (1:10,000) diluted murine secondary antibody (Sigma, USA), respectively, and incubate at room temperature for 1h. Wash with TBST for 3 times, and add ECL luminescent solution (Sigma, USA) and incubate at room temperature for 1h. TBST was washed 3 times, and ECL luminescent solution (Beyotime, China) was used for luminescence visualization.
2.6. Dual luciferase reporter gene
The wild-type SREBP1 luciferase reporter gene vector (wt-SREBP1) and mutant SREBP2 luciferase reporter gene vector (mut-SREBP1) were constructed respectively. All miR-27a-5p mimic, miR-27a-5p inhibitor and dual-luciferase reporter vectors were designed and synthesized by Guangdong Ruibo Biological Company. The cells were transfected according to the experimental groups, and the luciferase activity was detected 24 h later using the Dual-Luciferase Reporter Gene Assay Kit (Promega, USA).
2.7. MTS assay.
The effect of miR-27a-5p on the viability of thyroid cancer cells was detected using MTS (Promega, USA) according to the manufacturer's instructions. Cells were seeded in 96-well plates at a density of 2.5×103 cells/well 24 h after transfection. After the cells regained their viability and growth was stabilized, the cells were incubated with 10 µL of MTS diluted in 90 µL of medium for 1.5 h, and the absorbance values of the cells were detected at 12, 24, 48, and 72 h. Three independent replicates of each cell line were performed. Each cell line was subjected to 3 independent replications, and statistical plots were made and analyzed.
2.8. Plate cloning experiment.
Thyroid cancer cells were seeded in 6-well plates at a density of 500 cells/well, and routinely cultured in an incubator at 37℃ for 2 weeks, during which the liquid was changed every 3–4 days to observe the growth status, and the culture was terminated when clonal groups of cells could be observed in the plates by naked eyes. At the end of the culture, the medium in the plate was aspirated, washed twice with PBS, 1 mL of 4% paraformaldehyde (Dingguo Biotechnology, China) was added to each well, and the plate was left for 30 min to fix the cells, the paraformaldehyde was aspirated and washed twice with PBS. Add 1 mL of crystal violet staining solution (Beyotime, China) to each well, stain for 30 min, recover the crystal violet staining solution, wash with PBS for 2 times, wait for the water to evaporate and dry, observe under the microscope and take pictures. quantitative analysis by Image J software.
2.9. Wound healing experiment
Transfected BCPAP and WRO cells were inoculated in 6-well plates, respectively. When the cells grew to about 80% confluence, cell-free areas were formed by scraping vertically with the tip of a 200 µl pipette. The wells were then gently cleaned with PBS and the wounds were observed under a microscope and photographed. Serum-free medium was then added to the wells and cell culture was continued.After 24 hours, the wounds were observed again. The cells were then compared for wound healing.
2.10. Transwell assay.
In the Transwell invasion assay, the matrix gel was prepared according to the ratio of Matrigel Matrix Gel (BD, USA): pre-cooled serum-free medium = 1:8, and the matrix gel was spread in the upper chamber. After the cells were transfected for 24 h, 200 µL of cell suspension containing 1.0×105 cell number density was added to the upper chamber of each well, and 600 µL of medium containing 10% fetal bovine serum was added to the lower chamber, and the upper chamber was taken out after 24 h of incubation, and then washed, fixed, stained, observed under the microscope, and photographed. In the cell migration experiment, it was not necessary to lay matrix gel in the small chamber. After the cells were transfected for 24 h, 200 µL of cell suspension containing 2.5×104 cells per well was added to the upper chamber, and the lower chamber was incubated with 600 µL of medium containing 10% fetal bovine serum for 24 h. The rest of the operation was the same as that of the invasion experiment.
2.11. Cell cycle assay.
Cell cycle was detected by flow cytometry. 48 h after cell transfection, cells were digested and obtained in suspension for centrifugation. Cells were fixed after resuspension and washing according to the instructions of the cycle detection kit (Beyotime, China), and cycle changes were detected using flow cytometry after incubation with PI and avoiding light for 30 min. ModFit LT was used to assess the GO/G1, S, and G2/M cell fractions of the cells.
2.12. Cell apoptosis assay.
In the apoptosis assay, 48 hours after cell transfection, apoptotic changes were detected by flow cytometry according to the instructions of the Apoptosis Detection Kit (BIOTEC, China) and quantitatively analyzed using Flowjo software.
2.13. Statistical analysis.
This study was analyzed using SPSS 23.0 statistical software. Images were drawn by Graphpad Prism 9. All data were performed, three independent replicated experiments. For measurement data, expressed as mean ± standard deviation (Mean ± SD), independent samples t-test was performed for comparison between two groups; one-way ANOVA was performed for comparison between multiple groups. For count data, the paired t-test was used to analyze the differences in gene expression in DTC tissues and paired paracancerous tissues, and the Pearson chi-square test was used to analyze the correlation between gene expression and patients' clinical data. All statistical analyses were two-sided tests with α = 0.05, and P < 0.05 was considered statistically different.