2.1 Animals preparation
The present investigation employed adult male C57 BL/6J mice, with body weights ranging from 25 to 28 grams, acquired from the Experimental Animal Center of Second Affiliated Hospital of Soochow University. All experimental protocols and procedures received the approval of the Institutional Animal Care and Use Committee (IACUC) of Second Affiliated Hospital of Soochow University and were in strict compliance with the National Institutes of Health (NIH) guidelines for the care and use of laboratory animals. The mice underwent acclimatization to a 12-hour light/dark cycle environment, enjoying unrestricted access to food and water, amidst conditions of regulated humidity and temperature (24 ± 0.5°C).
2.2 Models of SAH and experimental design
The experimental SAH model employed in this study adheres to the methodologies delineated in prior research7. The procedural steps were meticulously executed as follows: Initially, mice were rendered unconscious through the inhalation of 3% isoflurane for induction, followed by a maintenance dose of 1.5% isoflurane (RWD Life Science, Shenzhen), and subsequently immobilized within a stereotaxic apparatus. The scalp was then disinfected, and a 1.0 cm longitudinal incision was carefully made to reveal the skull. A precisely measured 1.0 mm diameter borehole was created at a locus 4.5 mm anterior to the bregma, situated along the midline. Concurrently, a mouse was served as an arterial blood donor via left ventricular cardiac puncture. Subsequently, 50 µl of the harvested arterial blood was delicately injected into the prechiasmatic cistern via the previously fashioned borehole, ensuring the needle remained in situ for a minimum of 2 minutes to obviate any backflow of blood or cerebrospinal fluid (CSF) leakage. For the sham-operated cohort, an analogous procedure was enacted, albeit with an injection of a saline solution mimicking the volume of blood. Post-operatively, all mice were afforded a recovery period of 45 minutes prior to being rehoused in their enclosures, where they were maintained in an environment with a controlled temperature of 24.0 ± 0.5°C.
2.3 Cell culture
To procure primary microglia cells, cortical tissues from newborn mice were meticulously collected and subjected to enzymatic digestion within a 24-hour postnatal window. This animal-based study was sanctioned by the Animal Ethics Review Committee of Nanjing Drum Tower Hospital. Under the scrutiny of a microscope, the meninges were carefully excised, followed by digestion with TrypLE in a temperature-controlled incubator set at 37°C for a duration of 10 minutes. Dulbecco's Modified Eagle Medium (DMEM, C11995500BT, Gibco, CA, USA) supplemented with 10% Fetal Bovine Serum (FBS, 10099141, Gibco, CA, USA) and 1% penicillin-streptomycin (10378016, Gibco, CA, USA) was utilized to nurture primary microglia cells in vitro for 10 days and 13 days respectively. Upon gently agitating the culture dish, the microglia cells ascended to the surface and were subsequently translocated to a fresh culture dish. BV2 (ZQ0397, Zhong Qiao Xin Zhou Biotechnology, Shanghai, China), a microglial cell line, was cultured in Modified Eagle Medium (MEM, C12571500BT, Gibco, CA, USA) enriched with 10% FBS and 1% penicillin, with media refreshed on alternate days.
2.4 Oxyhemoglobin‑induced SAH model in vitro
To emulate the conditions of SAH in vitro, primary microglia and BV2 cells were subjected to an exposure of hemoglobin (Hb), obtained from bovine erythrocytes (Sigma, St. Louis, MO, USA), at a concentration of 10 µmol/L.
2.5 Network pharmacology
2.5.1 Drug-disease target prediction.
First, search for the structural information of Tremella polysaccharides in the PubChem database (https://pubchem.ncbi.nlm.nih.gov). Once the structure of Tremella polysaccharides is obtained, import it into the Swiss Target Prediction platform (http://swisstargetprediction.ch) to predict the potential targets of Tremella polysaccharides. Next, retrieve target information related to subarachnoid hemorrhage by entering the keyword "subarachnoid hemorrhage" in the GeneCards (https://www.genecards.org/), OMIM (https://omim.org/), and DisGeNET (https://www.disgenet.org/) databases. Integrate all targets from these three databases and remove duplicate genes. Subsequently, use the UniProt database to validate these gene informations to ensure data accuracy. Map the targets of Tremella polysaccharides obtained from the Swiss Target Prediction platform to the targets obtained from the disease databases. Use a Venn diagram to visualize the intersection of these targets. Finally, use Cytoscape 3.8.2 software to construct a "drug-component-target" network to more intuitively display the relationship between Tremella polysaccharides and targets related to subarachnoid hemorrhage.
2.5.2 Construction of target protein interaction network
Upload the data of the drug and intersecting genes to the STRING database (https://string-db.org/) to construct a Protein-Protein Interaction (PPI) network. Select "Homo sapiens" as the species and set the minimum interaction score to 0.4 to ensure the reliability of the research results. Keep other parameters at their default settings, ultimately generating a protein-protein interaction network graph.
2.5.3 GO enrichment analysis and KEGG pathway analysis
Upload the data of the drug and disease intersecting genes to the DAVID database (https://david.ncifcrf.gov/summary.jsp), select the gene identifier as OFFICIAL_GENE_SYMBOL, and set the species to "Homo Sapiens". Use the GO gene function annotation tool of DAVID 6.8 to analyze in detail the specific roles of the target proteins of Tremella polysaccharide in treating subarachnoid hemorrhage from three aspects: Biological Process (BP), Cellular Component (CC), and Molecular Function (MF). To further clarify the role of the targets of Tremella polysaccharide in treating subarachnoid hemorrhage in signaling pathways, perform KEGG pathway enrichment analysis. Through this analysis, the main gene function enrichment processes and signaling pathways in the treatment of subarachinoid hemorrhage with Tremella polysaccharide can be revealed, thereby predicting the mechanism of action of the drug in treating subarachnoid hemorrhage.
2.6 Neurologic function testing
Adhering to established research protocols, the modified Garcia JH scoring system is utilized to assess the neurological function of mice at intervals of 6, 12, and 24 hours subsequent to SAH. This evaluation methodically examines six dimensions: spontaneous movement, postural symmetry, forelimb extension function, climbing ability, bilateral tactile sensation, and bilateral whisker touch response, to ascertain the degree of neurological impairment in mice. Scoring parameters extend from 3 to 18 points, where elevated scores denote less severe neurological impairments, and an optimal score of 18 signifies a normal condition. Neurological evaluations are performed by two independent observers under blinded conditions to maintain the assessments' impartiality. Furthermore, mice from the Sham group scoring ≤ 15 and those from other groups scoring ≥ 15 are systematically excluded to safeguard the accuracy of the experimental outcomes.
2.7 Water content
Following the decapitation of the mice, the intact brain is meticulously dissected and segmented into two hemispheres. Subsequently, each hemisphere is precisely weighed to document its initial wet weight. Thereafter, the hemispheres are positioned within an oven and subjected to continuous drying for 24 hours to eliminate moisture. Upon completion of the drying process, the hemispheres are again weighed to ascertain their dry weight. The formula employed to compute the water content percentage is as follows: Water Content Percentage = ((Wet Weight - Dry Weight) / Wet Weight) × 100%. This methodology guarantees the precise quantification of water content within the brain tissue.
2.8 Rotarod test
Mice aged 6–7 weeks were pre-trained on a rotarod fatigue meter (YY920-YLS-4D, Beijing, China) with two trials per day for three consecutive days (speed ranging from 10 to 40 rpm over 300 seconds). After each trial, the mice were returned to their cages for a minimum rest period of 15 minutes before the next trial. The same procedure was employed during the testing phase, with a maximum test duration set at 300 seconds; any duration exceeding 300 seconds was recorded as 300 seconds. Following pre-training, all groups of mice underwent SAH modeling, and different concentrations of TFPS were administered 6 hours post-SAH induction. The SAH and Sham groups received an equivalent volume of saline, and rotarod tests were conducted 24 hours later
2.9 Western Blotting
For the lysis of brain tissue or cells, RIPA lysis buffer (89,901, Thermo Scientific, MA, USA) is employed, supplemented with 1% protease inhibitor (GRF101, Epizyme, Shanghai, China) and 1% phosphatase inhibitor (GRF102, Epizyme, Shanghai, China). Subsequently, the protein concentration is quantified using the BCA Protein Assay Kit (P0012S, Beyotime, Nanjing, China). Protein separation is facilitated by the PAGE Gel Fast Preparation Kit (PG111 & PG113, Epizyme, Shanghai, China), followed by electrophoretic transfer of the separated proteins onto a polyvinylidene difluoride membrane (3,010,040,001, Sigma, MO, USA). Following transfer, the membrane is blocked using 5% non-fat milk at room temperature for two hours, and subsequently incubated with primary antibodies overnight at 4℃. On the subsequent day, the membrane is rinsed with TBST and then incubated with horseradish peroxidase (HRP)-conjugated secondary antibodies at room temperature for two hours. Ultimately, protein bands are detected using the developing solution (WBKLS0500, Sigma, MO, USA) and analyzed via Image J software (National Institutes of Health). The antibodies used are listed in Table 1.
Table 1
Antibodies used in the study
Protein | Product code | Application | Dilution ratio | Company | Affiliating area |
Iba-1 | 019-19741 | WB IF | 1:1000 1:200 | Wako | Osaka, Japan |
Hb | sc-390668 | WB IF | 1:500 1:100 | Santa Cruz Biotechnology | Dallas, USA |
Bcl-2 | 12789-1-AP | WB | 1:1000 | Proteintech | Wuhan, China |
Bax | A12009 | WB | 1:1000 | ABclonal | Wuhan, China |
CC3 | 9664 | WB | 1:1000 | Cell Signaling Technology | MA, USA |
Trem2 | AB245227 | IF | 1:200 | abcam | London, UK |
CD86 | 13395-1-AP | WB IF | 1:1000 1:200 | Proteintech | Wuhan, China |
CD206 | 18704-1-AP | WB IF | 1:1000 1:200 | Proteintech | Wuhan, China |
KDR | 26415-1-AP | WB IF | 1:1000 1:200 | Proteintech | Wuhan, China |
P38 | 8690 | WB | 1:1000 | Cell Signaling Technology | MA, USA |
p-P38 | 9215 | WB | 1:1000 | Cell Signaling Technology | MA, USA |
NF-κB | 8242 | WB | 1:1000 | Cell Signaling Technology | MA, USA |
p-NF-κB | 3033 | WB | 1:1000 | Cell Signaling Technology | MA, USA |
ERK1/2 | 67170-1-Ig | WB | 1:1000 | Proteintech | Wuhan, China |
p-ERK1/2 | AP0472 | WB | 1:1000 | ABclonal | Wuhan, China |
JNK | 66210-1-Ig | WB | 1:1000 | Proteintech | Wuhan, China |
p-JNK | AP0631 | WB | 1:1000 | ABclonal | Wuhan, China |
β-Actin | AC026 | WB | 1:5000 | ABclonal | Wuhan, China |
β-Tubulin | 10094–1-AP | WB | 1:5000 | Proteintech | Wuhan, China |
GADPH | 60004-1-Ig | WB | 1:5000 | Proteintech | Wuhan, China |
Anti-rabbit IgG, HRP-linked Antibody | SA00001-2 | WB | 1:5000 | Proteintech | Wuhan, China |
Anti-mouse IgG, HRP-linked Antibody | SA00001-1 | WB | 1:5000 | Proteintech | Wuhan, China |
2.10 Quantitative real‑time polymerase chain reaction
Total mRNA is isolated utilizing the Total RNA Extraction Reagent (R401-01, Vazyme, Nanjing, China). Subsequently, the mRNA is transcribed into cDNA using the reverse transcription mix (R223-01, Vazyme, Nanjing, China). Quantitative PCR (qPCR) is conducted employing the SYBR Green Master Mix (Q331, Vazyme, Nanjing, China). The results are analyzed utilizing the 2−△△Ct method and normalized to the quantity of GADPH. The primers employed are enumerated in Table 2.
Table 2
Primers used in the study
Primer | Forward primer | Reverse primer |
KDR | TTTGGCAAATACAACCCTTCAGA | GCAGAAGATACTGTCACCACC |
IL-1β | GCAACTGTTCCTGAACTCAACT | ATCTTTTGGGGTCCGTCAACT |
IL-6 | TAGTCCTTCCTACCCCAATTTCC | TTGGTCCTTAGCCACTCCTTC |
TNF-α | GACGTGGAACTGGCAGAAGAG | TTGGTGGTTTGTGAGTGTGAG |
GADPH | AGGTCGGTGTGAACGGATTTG | TGTAGACCATGTAGTTGA GGTCA |
2.11 Immunofluorescent staining
Frozen sections of 10µm thickness/cells are consolidated with 4% paraformaldehyde (P0099, Beyotime, Nanjing, China). Subsequently, 0.1% Triton X-100 (X100, Sigma, MO, USA) is employed for permeabilization to augment antibody penetration. Then, Immunology Staining Blocking Buffer (P0102, Beyotime, Nanjing, China) is utilized to obstruct non-specific binding. Following the blocking process, the sections/cells are incubated with primary antibodies overnight at 4°C to ascertain adequate binding to target proteins. On the subsequent day, they are incubated with the appropriate secondary antibodies. The nucleic acid dye, 4,6-diamidino-2-phenylindole (DAPI, 62,248, Thermo Fisher Scientific, MA, USA), is employed for a 10-minute staining of the cells. Upon completion of immunofluorescence staining, high-definition images are procured under a Leica Thunder microscope. Subsequently, ImageJ software (NIH, USA) is employed for counting and analyzing the intensity of the immunofluorescent cells. The exhaustive details of the antibodies utilized are enumerated in Table 1.
2.12 Terminal deoxynucleotidyl transferase–mediated dUTP nick end labelling
In accordance with the manufacturer's guidelines, TUNEL staining is conducted on frozen brain sections utilizing the TUNEL detection kit (C1089, Beyotime, Nanjing, China). The protocol entails the following steps: Initially, the slides are incubated with anti-NeuN primary antibody (1:200, 24307, Cell Signaling Technology) overnight at 4°C to ensure adequate binding to NeuN protein. On the subsequent day, they are incubated with the corresponding secondary antibody at room temperature for one hour. Subsequently, 1µl of TdT enzyme is diluted five-fold and blended with 45 µl of labeling solution, ensuring ample mixture for each section. Each section is then incubated with the mixture at room temperature for 30 minutes to facilitate the TUNEL reaction. Upon completion of TUNEL staining, the sections are imaged using a Leica Thunder microscope to acquire high-quality images. Subsequently, ImageJ software is employed to analyze the whole brain NeuN + TUNEL+/NeuN + ratio (n = 6) to evaluate the extent of apoptosis.
2.13 Flow cytometry
HT22 cells are subjected to incubation with Dil cell membrane red fluorescent staining reagent (C1991S, Beyotime, Nanjing, China) under dark conditions for 15 minutes; the cells are subsequently harvested and fragmented utilizing an ultrasonic cell disruptor. The cell fragments are solubilized in DMEM (1:100) and incubated within Bv2 for one hour, followed by digestion with trypsin and two washes with PBS. The expression of red fluorescence in the cell fragments is assessed using a Flow cytometer (BD Accuri™ C6 Plus, NJ, USA).
2.14 Enzyme-linked immunosorbent assay
ELISA kits procured from ABclonal Biotechnology Co., Ltd. were employed to quantify brain tissue levels of IL-1β, IL-6, and TNF-α, adhering to the manufacturer’s protocol.
2.15 RNA interference
BV2 cells are transfected with plasmids harboring KDR-specific shRNA to facilitate RNA interference. Preliminary experiments ascertained the optimal concentrations of the plasmid and Lipofectamine (L3000015, Thermo Fisher Scientific, MA, USA). Cells were subsequently analyzed 24 hours post-transfection. The sequences for KDR shRNA and the negative control (NC) are delineated as follows: KDR sequence, 5′-CTT GCA TCA GAA GAG CTG AAA-3′; NC sequence, 5′-TTC TCC GAA CGT GTC ACG T-3′.
2.16 Statistical analysis
All data are expressed as mean ± standard error of the mean (SEM). Statistical analyses were conducted using Prism 9.0 software (GraphPad Software, La Jolla, CA, USA). For pairwise comparisons, the t-test was utilized; for comparisons among multiple groups, one-way ANOVA was employed. A P-value < 0.05 was deemed statistically significant. Additionally, the study schematics were crafted using the BioRender platform (BioRender, GTA, CAN).