Reagents
Recombinant human CCL2 for cell treatments was obtained from R&D (#279-MC-050). AS1842856 (#344355) and phorbol 12-myristate 13-acetate (PMA, #P8139) were obtained from Sigma-Aldrich (St. Louis, MO, USA). SB203580 (#S1076), SP600125 (#S1460) and SCH772984 (S7101) was obtained from Selleck (Shanghai, China). Dual-Luciferase® Reporter Assay System (E1910) was from Promega (Madison, WI, USA). Simple ChIP Plus Sonication Chromatin IP kit (#56383) and Alexa Fluor 488 conjugated CD68 antibody (#24850) was purchased from CST (Beverly, MA, USA). Alexa Fluor 647 conjugated CCR2 antibody (#ab225432) was obtained from Abcam (Cambridge, UK). Lipofectamine 2000 (#11668019), negative control (miR-NC), miR-580-5p mimic (#4464066) and inhibitor (AM17000) were obtained from Thermo Fisher Scientific. siRNA-ZNF562, siRNA-circ-102231 and the negative control were purchased from GenePharma Biotechnology (Shanghai, China). The siRNA target site of hsa_circ_0110102: 5’-ACAGTGGAGAAAGGTAAATGCAA-3’, siRNA target site of ZNF562: 5’-GTCATTGATAACATCTTATCAGG-3’. The construction of overexpressing hsa_circ_0110102 in Ubi-MCS-Luc-IRES-Puromycin vector was performed by Biosyntech Co., Ltd (Suzhou, China).
Clinical tissue samples and cell culture
HCC tissues used in this study involved 17 patients of both genders with previously diagnosed HCC (13 men, 4 women) with averaged age 57 ± 12 years at Shandong Provincial Hospital Affiliated to Shandong First Medical University, Jinan, China. Tumor tissues and adjacent tissue samples were immediately collected and placed into liquid nitrogen and stored at -80 °C until further processing. All samples used in this study were approved by the Committees for Ethical Review of Research Involving Human Subjects at Shandong Provincial Hospital.
Human HCC cell lines HepG2, MHCC-97H, Huh-7, Hep-3B and SMCC-7721, human normal liver cell line (LO2), human monocytic leukemia cell THP-1 were purchased from the Type Culture Collection of the Chinese Academy of Sciences (Shanghai, China). All these cell lines were cultured in Dulbecco’s modified Eagle’s medium (DMEM) or RIPM-1640 medium supplemented with 10% FBS (Gibco) at 37 °C.
The THP-1 and Huh-7 co-culture system were established to simulate the microenvironment of HCC as previously reported [22]. Briefly, THP-1 cells were seeded into 6-well plates and differentiated with 200 ng/mL PMA for 24 h [23]. Meanwhile, Huh-7 cells were transfected with expression vector for 24 h then seeded into transwell at a density of 1.5 × 105 cells per chamber. The differentiated THP-1 cells were washed three times with PBS and then co-cultured with Huh-7 cells for another 24 h. At the end of the treatment, THP-1 cells were harvested for FCM, RT-qPCR and western blot assay, the medium was collected for ELISA assay.
RNA immunoprecipitation (RIP)
RIP was conducted with a Magna RIP TM RNA-binding protein immunoprecipitation kit (Millipore, USA) according to the manufacturer’s guidelines. Briefly, anti-Ago2 antibody and rabbit IgG was incubated with magnetic beads at room temperature for 30 min to generate antibody-coated beads. Approximately 1 × 107 cells were lysed and mixed at 4 °C overnight. After wash, co-immunoprecipitated RNA was extracted and detected using RT-qPCR.
Pull-down assay
Biotin-labelled hsa_circ_ 0110102 or oligo probes (GenePharma, China) were pre-incubated with Streptavidin-Dyna beads M-280 (#11206D, Invitrogen, USA) as described before [24]. hsa_circ_ 0110102 overexpressing and control cells were lysed and incubated with the beads at 4 °C overnight. Then, RNA was extracted and measured by RT-qPCR.
Florescence in situ hybridization (FISH)
Huh-7 cells were seeded into confocal dishes and fixed with 4% paraformaldehyde overnight. Cy3-labelled hsa_circ_0110102 probe (5’-GGTGCAATCGGACACCTTGGATATTGCAGACA-3’-Cy3) was designed and synthesized by GenePharma (Shanghai, China). Nuclei were counterstained with 4,6-diamidino-2-phenylindole (DAPI). All processes were conducted according to the manufacturer’s instructions. Images were obtained by a FV3000 microscope (Olympus, Japan).
Western blot analysis
Cells were homogenized in ice-cold lysis buffer as described before [25]. The protein in cytoplasm and nucleus protein were extracted by kit from Beyotime (Shanghai, China), then separated by SDS-PAGE and transfected onto PVDF membrane, immunoblotted with indicated primary antibodies and HRP-linked antibodies (1:5000 dilution; Anti-Rabbit IgG, #7074; Anti-mouse IgG, #7076; CST) and visualized using Tanon-5200 Chemiluminescence Imager (Tanon, Shanghai, China) with ECL substrate (Millipore, CA, USA). primary antibodies used were as follows: CCL2 (1:1000 dilution; ab9669, Abcam), COX-2 (1:1000 dilution; ab15191, Abcam), FoxO1 (1:1000 dilution; ab39670, Abcam), ERK1/2 (1:1000 dilution; #4695, CST), Phospho-ERK1/2 (1:1000 dilution; #4370, CST), JNK (1:1000 dilution; #9252, CST), Phospho-JNK (1:1000 dilution; #9255, CST), P38 (1:1000 dilution; #8690, CST), Phospho-P38 (1:1000 dilution; #8632, CST) and β-actin (1:5000 dilution; #3700, CST).
Cell proliferation assay
A Cell counting Kit-8 (CCK-8, #HY-K0301, MCE, Shanghai, China) method was utilized to assess the proliferation of cells. Transfected cells were seeded into 96-well plates at a density of 5 × 103 cells per well and incubated at 37 °C for indicated time. 10 µL CCK-8 solution was added into each well and incubated for 2 h before detect, and then absorbance at 450 nm was measured using a microplate reader (Varioskan LUX, Thermo Fisher, USA).
For EdU staining assay, an Edu staining kit (iFluor 647, ab222421, Abcam) was used according to the manufacturer’s protocol. In brief, cells were seeded into 6-well plates and transfected for 48 h. Then, cells were stained with EdU solution for 2 h and fixed with 4% paraformaldehyde and cultured with 0.5% Triton X-100 for 10 min. Finally, cells were stained with DAPI for 10 min. Images were collected with a FV3000 microscope (Olympus, Japan).
Quantitative reverse-transcription PCR (RT-qPCR)
Total RNA was extracted using TRIzol reagent (#15596-026, Invitrogen), nuclear and cytoplasmic RNA was extracted with the PARIS™ Kit (#AM1921, Thermo Fisher) as previously reported [13]. RT-qPCR kits were purchased from TaKaRa Bio Inc (Dalian, China) and cDNA was synthesized according to the manufacturer's instruction. The Quant Studio 5 Real-Time PCR System (Applied Biosystems, USA) and the SYBR Green (no. B21202, Bimake, Houston, USA) were used for RT-qPCR assay. The expression levels of mRNA were normalized to GAPDH mRNA. Primers were purchased from Genscript biotech co., ltd. For miRNA assay, miRNA-specific Taqman PCR primers were obtained from Life Technologies (CA, USA). Genes levels were normalized to U6 or GAPDH to generate a2−ΔΔCt value for the relative expression of each transcript. Primer sequences used in the experiments were as follows:
Gene | Forward (5’-3’) | Reverse (5’-3’) |
hsa_circ_0110102 | CCCAGGGAACCAATCTGTCC | GGTGAACTCCACAGCCACAT |
ZNF562 | CCCAGGGAACCAATCTGTCC | GGTGAACTCCACAGCCACAT |
CCL2 | GCTCATAGCAGCCACCTCATTC | CCGCCAAAATAACCGATGTGATAC |
COX-2 | CTGGCGCTCAGCCATACAG | CGCACTTATACTGGTCAAATCCC |
GAPDH | GGAGCGAGATCCCTCCAAAAT | GGCTGTTGTCATACTTCTCATGG |
Flow cytometry
The isolated TIL was incubated with CD68 and CCR2 antibody for 1 h at 4 °C; CCL2-stimulated PBMCs were incubated with CCR2 antibody for 1 h at 4 °C, then washed with PBS for three times and finally resuspended in 200 µL PBS and analyzed by flow cytometry.
For cell cycle analysis, HepG2 and Huh-7 cells were trypsinized and fixed with 70% ethanol overnight at 4℃, followed by staining with PI reagent. The percentage of cells in the G0/G1, S, and G2/M phases was recorded using Flow cytometry (BD Biosciences, NY, USA).The results obtained were analyzed by the software FlowJo.
ELISA assay
THP-1 cells were treated with 50 ng/ml rCCL2 or transfected with the expression vector, then cells were treated with or without 1 µM AS1842856 or infection with sh-FoxO1 for 24 h. The culture supernatant was collected, and were used to detect the concentration of VEGF (cat no. DVE00), COX-2 (cat no. AF4198), IL-6 (cat no. D6050) and PGE2 (cat no. KGE004B) secreted using ELISA kits (all from R&D, Minneapolis, MN, USA). The absorbance was measured at 450 nm using a microplate reader (Varioskan LUX, Thermo Fisher, USA).
In vitro migration and invasion assays
Cell migration and invasion were measured using Transwell assay as previously described [26].
Plasmid constructs and transfection
pSELECT-HA-mFoxO1-wild-type (Addgene plasmid # 83308) and Δ256 (Addgene plasmid # 83379) were a gift from Steven Abcouwer[27]. Full-length of CCL2 cDNA was amplified and cloned into a pcDNA3.1 expression vector. The CCL2 promoter sequence from positions -500 to + 1 and COX-2 promoter sequence from positions − 1,122 to + 27 relative to the transcriptional start site subcloned into pGL3-Basic vector, the point mutation in the FoxO1 binding site of COX-2 promoter was generated by site-directed mutagenesis that splices by overlapextension. FoxO1 shRNA and scrambled shRNA were purchased from Obio technology Co., Ltd. (shanghai, China). Cells were seeded into 6-well plates for overnight culture, then transfected with hsa_circ_0110102 overexpression vector or siRNA, miR-NC, miR-580-5p mimic or inhibitor with lipofectamine 2000 for 48 h, blank vector-transfected cells were used as controls.
Chromatin immunoprecipitation assay
To detect the in vivo association of FoxO1 with human COX-2 promoter, chromatin immunoprecipitation (ChIP) analysis was performed as previously described using SimpleChIP Enzymatic Chromatin IP Kit (#9002, CST, USA) according to manufacturer's protocol [28]. ChIP-PCR was used for validation with the forward primer 5’-CACCGGGCTTACGCAATTTT-3’ and the reverse primer 5’-ACGCTCACTGCAAGTCGTAT-3’, which were specifically designed from the COX-2 promoter region (139 to + 29).
Luciferase assays
Cells were transfected with luciferase reporter plasmids and subsequently incubated for 24 h in the complete medium. Luciferase activity was measured using the Dual-luciferase reporter assay System (Promega, Madison, WI) and normalized to Renilla luciferase values. Measurements for three biological replicates were taken in triplicate and averaged.
Statistical analysis
Data are expressed as mean ± SEM. SPSS 21.0 was used for statistical analysis. Unpaired Student’s t-test were used for comparation between two groups. Two-way ANOVA analysis using the Tukey test was employed to compare three groups or more. P < 0.05 was considered statistically significant.