Cell culture and transfection
Human ES cell lines A673 and RDES were obtained from the Cell Bank of the Chinese Academy of Sciences (Shanghai, China). The cells were grown under the following standard conditions: RPMI-1640 medium (HYCLONE, USA) containing 10% FBS, 37 °C and 5% CO2. In brief, siRNA for PRDX2 (siPRDX2) was mixed with the diluted Lipofectamine 2000 based on the manufacturer’s instruction. After incubated for 20 min at room temperature, the mixture was added into the culture plate for 6 h incubation with 5% CO2 at 37 °C. Then the cells were treated with complete medium at 37 °C in a CO2 incubator for 48 h.
Quantitative real-time PCR analysis (qRT-PCR)
Total mRNA was isolated from cells using an RNA isolation kit (CWBIO, Beijing, China). Then the total RNA was reversely transcribed into cDNA using the Revert Aid First Strand cDNA Synthesis Kit (Thermo, USA). ABI Prism 7300 sequence detector (Applied Biosystems) and SYBR Green reagent were performed for qRT-PCR and normalized to the expression of β-actin mRNA. Relative expression was calculated using the ∆∆Ct method for each sample. Primers were as follows: β-actin sense, 5’ CCCGAGCCGTGTTTCCT 3’, and antisense, 5’ GTCCCAGTTGGTGACGATGC 3’; PRDX2 sense, 5’ CCTTCAAAGAGGTGAAGCTG 3’, and antisense, 5’ GTTGCTGAACGCGATGAT 3’. The assay was performed three times.
Western blot assay
A673 and RDES cells transfected with siPRDX2 were lysed with RIPA buffer (CWBIO, Beijing, China). Protein was separated by gel electrophoresis using SDS-PAGE and blotted onto PVDF membrane. The membrane was probed with primary antibodies against PRDX2, Bcl-2, Bax, cleased-Caspase3, AKT, p-AKT, CyclinD1 and Tubulin (Solarbio Science & Technology, Beijing, China) overnight at 4 °C. Then the PVDF was probed with secondary antibodies for 1 h at room temperature. Finally protein bands were detected using an ECL reagent, normalized to the expression of Tubulin. Western blot assay was performed in triplicate.
CCK8 assay
In brief, cells were planted into 96-well plates at a density of 1×103 per well. After cultured for 24 h, 10 µl of CCK8 solution (Solarbio Science & Technology, Beijing, China) was added into each well and after incubated for 1.5 h at 37 °C, OD value was detected at 450 nm. Each experiment included triplicate measurements.
Colony formation assay
2×102 cells transfected with siPRDX2 were seeded into a 35mm dish and cultured in a cell culture incubator for 2 to 3 weeks. After formed visible clones, the cells were fixed with 4% paraformaldehyde solution for 20 minutes. Then the clones were stained with 0.1% crystal violet for 30 minutes and were taken a photograph and counted. Clone formation assay was repeated in three independent experiments.
Transwell assays
For the invasion assay, 10 µl Matrigel (BD, USA) that melt overnight was added to the upper chamber for 4-6 h, while 500 µl DMEM medium without serum was added to the lower chamber for 30 mimutes. About 1×105 cells transfected with siPRDX2 were planted in the upper chamber, while 500 µl complete medium was added to the lower chamber. After cultivating overnight, the invasive cells were fixed. Then five fields of view were randomly selected and photographed under the microscope. For the migration assay, the transwell chambers were coated with uncoated filters, and same procedures as those for the invasion assay were followed. Each transwell assay included triplicate measurements.
Gelatin zymography assay
After transfection for 48 h, 2.5×106 cells were planted into a 6 cm dish with 2 ml DMEM medium without serum. The proteins were separated by SDS-PAGE. The gel was stained with 0.25% Coomassie Blue R-250 for 4 hours and decolorized by a decolorizing solution from dark blue background to show clear bands. The assay was performed in triplicate.
Flow cytometry assay
Annexin V-FITC Apoptosis Detection kit I (Thermo Fisher Scientific, Shanghai, China) was used to the analysis of cell apoptosis. Transfected cells were collected and washed with PBS buffer twice. Then Annexin V / FITC mix and PI dye were added to cell suspension in dark for 15 minutes. Analysis of cell apoptosis was performed using flow cytometry. Flow cytometry assay was performed three times.
PI/Hoechst33342 double dye assay
Transfected cells (3×103) were planted into 96-well plates. After incubation for 24 h, cells were stained with 1X binding buffer containing dyes of Hoechst33342 and PI in dark for 10-15 minutes. Finally cells were photographed by fluorescence microscope. This assay included triplicate measurements.
Statistical analysis
Experimental results in this study were performed using SPSS 18.0 software. The comparison between two groups was analyzed using Student’s t-test. One-way ANOVA with the Turkey-Kramer post hoc test was used for multiple groups. Date was expressed as mean ± SD, and differences with P value of less than 0.05 were considered statistically significant.