2.1 Study population
Patients (45-80 years of age) referred for colonoscopy, were screened for participation. Exclusion criteria included history of inflammatory bowel disease, conditions of intestinal malabsorption (e.g. coeliac disease and lactose intolerance), familiar risk of CRC (hereditary nonpolyposis colorectal cancer and familial adenomatous polyposis), pregnancy and/or continuous treatment with NSAID, anti-coagulant or phosphodiesterase inhibitor. Furthermore, incomplete examination of the entire colon resulted in exclusion.
Patients were divided into 2 groups based on endoscopic findings and medical history: patients with present or history of CRN (termed CRN patients) and patients without present nor history of CRN (termed and served as controls, CTRL patients). A total of 73 patients were enrolled. Patient group characteristics are shown in Table 1.
Table 1. Study population characteristics and medications. An expected imbalance between patient groups was observed for comorbidities and medications.
|
CRN
|
CTRL
|
Number
|
53
|
20
|
Males / females
|
27 / 26
|
8 / 12
|
Mean age, years (range)
|
63 (50-78)
|
61 (46-76)
|
Medication
None
Anti-diabetic
Anti-estrogen
Anti-hypertensive
Anti-epileptic
Asthma inhalers
Bisphosphonate
Methotrexate
Proton pump inhibitor
Selective serotonin reuptake inhibitor
Statins
Thyroid hormone
Triptans
Xanthine oxidase inhibitors
|
25
1
2
16
1
3
3
1
2
2
2
0
1
1
|
15
0
0
2
0
0
0
0
1
0
1
2
0
0
|
2.2 Chemicals
SC 51322, PF 04418948, L-798,106, L-161,982, amiloride, theophylline, indomethacin, acetazolamide, bumetanide, ouabain as well as salts for Ringer’s solution were purchased from Sigma-Aldrich (Brøndby, Denmark). GW627368X, TCS 2510, and Sulprostone were purchased (Santa Cruz Biotechnology, Texas, USA. ONO-DI004 and ONO-AE1-259 were kindly provided by Ono Pharmaceuticals Co., Ltd. (Osaka, Japan). All other chemicals were of analytical grade.
Selection of receptor agonists and antagonists was based on a thorough search of available literature, with a preference for compounds tested on human tissue.
2.3 Biopsy extraction
Six endoscopic biopsies were obtained from each patient using standard biopsy forceps (Boston Scientific, Radial Jaw 4, large capacity). Biopsies were taken from macroscopically normal appearing sigmoid mucosa on retraction of the endoscope; about 30 cm orally from the anal verge and at least 10 cm from macroscopically abnormal appearing tissue.
Four biopsies allocated for functional studies, were immediately placed in an iced bicarbonate Ringer solution containing (in mM): Na+ (140), Cl- (117), K+ (3.8), PO-4 (2.0), Mg2+ (0.5), Ca2+ (1.0), and HCO-3 (25), and transferred to the laboratory. The remaining biopsies were snap frozen in liquid nitrogen and stored at -80 ºC until further examination.
2.4 Experimental methods
Two experimental methods were employed: functional studies in modified air-suction Ussing (MUAS) chambers measuring short circuit current (SSC) and quantitative real-time polymerase chain reaction (qPCR).
2.4.1 Functional studies in MUAS-chambers
Four biopsies were mounted and oxygenated in MUAS-chambers after extraction as described by Larsen et al (19). Biopsies were bathed on both sides with 10 mL Ringer, supplemented with 5.5 mM D-glucose. Temperature was maintained at 37.2 ºC by water jackets. An automated voltage-clamp device continuously recorded SCC and slope conductance (19).
Experiments began after a stable basal SCC was obtained within 10 min. All experiments were initiated by addition of amiloride (20 µM, mucosal side) to inhibit electrogenic sodium absorption mediated through epithelial sodium channels and followed by theophylline (400 µM, serosal side) to inhibit phosphodiesterase-dependent cyclic adenosine monophosphate (cAMP) degradation. Finally, to eliminate endogenous cAMP synthesis, indomethacin (13 µM, serosal side) was added and incubated for 40 min.
Biopsies from 47 patients were treated with PGE2 and selective EP receptor agonists to investigate receptor function, Table 2. A single agonist was added in increasing concentrations (1 nM to 5 µM, serosal side) to each MUAS-chamber. The final agonist concentration step was followed by the addition of 5 µM PGE2, to elicit a maximal PGE2-induced response.
Table 2. Selected agonists and antagonists and applied antagonist concentrations for functional MUAS chamber experiments.
Receptor subtype
|
Agonist
|
Antagonist with concentration
|
EP1 receptor
|
ONO-DI004
|
SC 51322 2 µM
|
EP2 receptor
|
ONO-AE1-259
|
PF 04418948 3 µM
|
EP3 receptor
|
Sulprostone
|
L-798,106 500 nM
|
EP4 receptor
|
TCS 2510
|
L-161,982 2 µM
GW627368X 5 µM
|
Biopsies from 26 patients were treated with selective EP receptor antagonists, Table 2. A combination of 3 antagonists was added to each MUAS chamber (serosal side), to single out and investigate the remaining non-inhibited EP receptor subtype. After antagonist incubation (45 min.), cumulative doses of PGE2 were added (3 nM to 1 µM, serosal side). The EP4 receptor was also examined with another selective antagonist, GW627368X (GW-X, 5 µM, serosal side).
Experiments were terminated by the addition of acetazolamide, a carbonic anhydrase inhibitor (250 µM, serosal side), to measure HCO3-/H+-secretion, followed by bumetanide (25 µM, serosal side), to inhibit Na-K-Cl cotransporters and chloride secretion, and finally the Na+/K+-ATPase inhibitor ouabain (0.2 mM, serosal side) to assess and ensure tissue viability and data quality.
2.4.2 Quantitative real-time PCR
RNA isolation
Twenty biopsies, 10 CRN and 10 CTRL were matched according to gender and used for further qPCR investigations. RNA was extracted from the biopsies using RNeasy Mini Kit (Qiagen, Copenhagen, Denmark). Following extraction, RNA samples were placed on ice and quantified using a Nanodrop Spectrophotometer (LabTech International) in accordance with the MIQE guidelines (20).
qPCR analysis
RNA was reverse transcribed to cDNA using the nanoScript2 (Primerdesign Ltd., U.K.) according to the manufacturer’s protocol. Quantitative analysis of specific genes of interest within our cDNA samples was determined using Precision-iC SYBR green mastermix (Primerdesign Ltd.) with the CFX96 Real-Time PCR Detection System (Bio-Rad, Denmark). Duplicate reactions were performed in 20 μL volumes containing 10 μL Precision-iC SYBR green master mix, 300 nM primer (Primerdesign Ltd.), 15 ng cDNA and made up to 20 μL with nuclease-free water. The following cycling conditions were used: initial activation at 95 °C for 10 min., followed by 40 cycles of 95 °C for 15 sec., and 60 °C for 1 min. and data was collected during each cycling phase. Melt curve analysis, to ensure each primer set amplified a single, specific product, completed the protocol. Quantification cycle (Cq) values were determined using Bio-Rad CFX96 Manager 3.0 software and the single threshold mode.
The geNorm reference gene selection kit (Primerdesign Ltd.) was used to identify the most stable reference genes and to determine optimal number of reference genes required for reliable normalization of qPCR data in these tissue samples (21). ß-actin and glyceraldehyde 3-phosphate dehydrogenase (GAPDH) were validated as the most stable reference genes in samples. The expression levels of genes of interest are expressed relative to the mean Cq value of the reference genes in each sample.
Primers were designed, synthesized and quality controlled by Primerdesign Ltd., Additional file 1. The sequences for the reference genes ß-actin and GAPDH are commercially sensitive and therefore unavailable.
2.5 Data analyses
The present study is exploratory and therefore not statistically powered for specific endpoints. If identical experiments were performed on several biopsies from the same patient, a mean value of parameter results was used. A comparison of parameter values between patient groups was performed by an unpaired t-test when standard deviations were equal, and a Welch’s t-test if unequal. Data are presented as mean ± SEM.
To assess agonists and receptors, data obtained from dose-response curves were analyzed with either a single-Michaelis-Menten model (srm) or a two-Michaelis-Menten receptor/site model (trm) using Sigmaplot 13.0 for Windows, Systat Software Inc. (USA/Canada). Outcome data were maximum SCC responses (RMax) and EC50 of these analyses.
All other statistics were performed using RStudio (Boston, USA), or GraphPad Prism (San Diego, USA) version 8 for the qPCR analysis. P-values < 0.05 were considered significant.