Patients and specimens collection
The permission for this study was obtained from the ethics committee of the PLA Rocket Force Characteristic Medical Center. All the individuals collected in this study provided the written informed consent before sampling.
156 patients who were pathologically diagnosed with CCA in the PLA Rocket Force Characteristic Medical Center were collected in the study. None of the patients had received chemotherapy or radiotherapy before blood collection. In addition, 58 healthy volunteers who visited the hospital for routine checkup and have no history of carcinoma were enrolled in the study as healthy controls. The patients group and healthy controls were age and gender matched.
5 ml blood specimens were collected from the participants, and stored in EDTA tubes. Then the samples were centrifuged at 2000 g for 15 min to separate serum specimens. The serum specimens were stored at -20℃ for until use.
The clinicopathological features of CCA patients were recorded, including age, gender, tumor size, lymphatic node metastasis, clinical stage, histological type and differentiation. All these data were listed in Table 1.
Table 1
Correlation of miR-106b expression with clinicopathological characteristics of CCA patients
Characteristics | No. N = 156 | MiR-106b expression | P values |
Low (n = 67) | High (n = 89) |
Age (years) | | | | 0.131 |
< 60 | 69 | 25 | 44 |
≥ 60 | 87 | 42 | 45 |
Gender | | | | 0.628 |
Male | 85 | 38 | 47 |
Female | 71 | 29 | 42 |
Tumor size (cm) | | | | 0.221 |
< 2 | 82 | 39 | 43 |
≥ 2 | 74 | 28 | 46 |
LN metastasis | | | | 0.038 |
Yes | 87 | 31 | 56 |
No | 69 | 36 | 33 |
Clinical stage | | | | 0.017 |
I-II | 76 | 40 | 36 |
III-IV | 80 | 27 | 53 |
Histological type | | | | 0.791 |
Nonpapillary | 95 | 40 | 55 |
Papillary | 61 | 27 | 34 |
Differentiation | | | | 0.009 |
Well | 79 | 42 | 37 |
Moderate/Poor | 77 | 25 | 52 |
Note: LN, lymphatic node. |
Rna Isolation And Quantitative Real-time Polymerase Chain Reaction (qrt-pcr)
Total RNA were isolated from collected serum samples using the Trizol reagent (Invitrogen, Carlsbad, CA, USA) according to the manufacturer’s protocols. The concentration of RNA was measured by NanoDrop ND-1000 (NanoDrop, Waltham, MA). The reverse transcription was carried out by the AMV reverse transcription system (Promega, USA).
In this study, quantitative real-time polymerase chain reaction (qRT-PCR) was used to evaluate the expression of miR-106b in serum samples. This reaction was performed with SYBR Green PCR master mix (Applied Biosystems, USA) in 7300 Real-Time PCR System (Applied Biosystems, USA). U6 gene was used as the endogenous control. All the primer sequences were as follows: miR-106b forward: 5'-TAAAGTGCTGACAGTGCAGAT-3', reverse: 5'-ATCTGCACTGTCAGCACTTTA-3'; U6, forward: 5'-TGCGGGTGCTCGCTTCGGCAGC3', reverse: 5'-CCAGTGCAGGGTCCGAGGT3'. Relative expression of miR-106b was normalized to U6 and calculated by 2−ΔΔCt method.
Statistical analysis
Statistical analyses were performed by the SPSS 21.0 statistical software. Student’s t test was applied to compare the different expression of miR-106b between CCA patients and healthy controls. Chi-square test was used to analyze the correlation of miR-106b expression with the clinicopathological features. To evaluate the diagnostic performance of miR-106b in CCA, we constructed the ROC curve in the present study. In all analyses, P < 0.05 was considered statistically significant.