Chemistry
Reagent-grade chemicals and solvents were purchased from a commercial supplier and used after purification. Thin-layer chromatography (TLC) was performed on silica-gel F254plates (Merck). Merck silica gel (60–120 mesh) was used for column chromatographic purification. All reactions were carried out in a nitrogen atmosphere. Melting points are uncorrected and were measured in open capillary tubes, using a Rolex melting-point apparatus. IR spectra were recorded as KBr pellets on a Perkin-Elmer RX 1 spectrometer and the wave numbers are reported in cm− 1. 1H NMR and 13C NMR spectral data were recorded on Advance Bruker 400 spectrometer (1H 400 MHz/13C 100 MHz) with DMSO-d6 as solvent and tetramethylsilane (TMS) as internal standard and reported in δ (ppm). J values are in hertz (Hz). The molecular mass of the compounds were obtained using high resolution positive ion electrospray ionization on Brucker 10152 mass spectrometer pos_tune_low_msq.m.
General procedure for the synthesis of substituted benzene sulphonamoyl alkanamides (3a-c) 36
Sodium carbonate (Na2CO3, 1.590 g, 15 mmol) was added to a solution of amino acids (2, 12.5 mmol) in water (15 mL) with continuous stirring until all the solutes had dissolved. The solution was cooled to -5oC and the appropriate benzenesulphonyl chloride 1a-c, 15 mmol) was added in four portions over a period of 1 h. The slurry was further stirred at room temperature for about 4 h. The progress of the reaction was monitored using TLC (MeOH/DCM, 1:9). Upon completion, the mixture was acidified using 20% aqueous hydrochloric acid to pH 2. The crystal was filtered via suction and washed with pH 2.2 buffer. The pure products (3a-c) were dried over self-indicating fused silica gel in a desiccator.
Synthesis of compounds 6a-6h 37
A mixture of Boc-glycine (4, 0.45 g, 1.84 mmol), 1-ethyl-3-(3-dimethyl aminopropylcarbodiimide hydrochloride (EDC, 0.53 g, 2.76 mmol), 1-hydroxybenzotriazole (HOBT, 0.248, 1.84 mmol), triethylamine (TEA), amines (1.84 mmol) in dichloromethane (DCM, 50 mL) was stirred at room temperature for sixteen (16) hours. The reaction was monitored using TLC. On completion of the reaction, it was washed with water (2 × 20 mL), brine (1 × 10 mL), dried over anhydrous sodium sulphate and the solvent was evaporated under reduced pressure to give the crude product (5a-h) which was then purified by flash column chromatography on silica gel. The products (5a-h) were then deprotected by addition of 10% TFA in DCM and allowed to stir for more than 1 h while been monitored with TLC. When the reaction was completed, the solvent was evaporated and the products, (6a-h) was used directly for the next stage of reaction.
Synthesis of glycine derived peptides 7a-7x
A mixture of 2-[phenylsulfonyl)amido]propanioc acid (3a-c, 1.84 mmol), EDC (0.53 g, 2.76 mmol), HOBT (0.248, 1.84 mmol), TEA, deprotected boc-glycine amine (6a-h, 1.84 mmol) in dichloromethane (50 mL) was stirred at room temperature for sixteen (16) hours. The reaction was monitored using TLC (MeOH/DCM, 1:9). On completion of the reaction, the mixture was acidified using 20% aqueous hydrochloric acid to pH 2. The crystals were filtered via suction and washed with pH 2.2 buffer. The pure products (7a-x) were dried over self-indicating fused silica gel in a desiccator.
N-(2-(3-chlorophenylamino)-2-oxoethyl)-2-(4-nitrophenylsulfonamido)propanamide (7a)
Yield 78%, melting point 120–124 oC FTIR (KBr, cm− 1), 3352 (NH), 3106, 2984 (C-H Ar), 2872 (C-H), 1667, 1595 (2C = O), 1523, 1481, 14267, (C = C), 1349, 1309 (2SO2), 1169 (SO2NH), 781 (C-Cl). 1H NMR (DMSO-d6, 400 MHz)δ: 1.12–1.16 (t, J = 6.72 Hz, 5H), 3.75–3.76 (d, J = 5.6 Hz 3H), 3.98–4.05(m, 1H), 7.09–7.35(m, 7H), 7.40–7.42 (d, J = 8.4 Hz, 1H), 7.76(s, 1H), 8.02–8.04(d, J = 8.8 Hz 2H), 8.31–8.41(m, 3H), 10.09 (s, 1H). 13C NMR (DMSO-d6, 100 MHz) δ: 19.48, 46.14, 51.32, 51.32 (aliphatic carbon), 117.80, 118.90, 123.46, 124.69, 128.16, 128.63, 130.93, 133.57, 140.64, 147.07, 149.88 (aromatic carbon), 168.07, 171.75(carbonyl carbon). HRMS-ESI CI7H18ClN4O6S, found value is (m/z): 441.0637 (M + H), calculated value is 441.0635
N-(2-(4-chlorophenylamino)-2-oxoethyl)-2-(4-nitrophenylsulfonamido)propanamide (7b)
Yield 72% melting point 180–182 oC; FTIR (KBr, cm− 1): 3386, 3344 (2NH), 3109, 3067 (C-H Ar), 2973, 2934 (C-H), 1890, 1652 (2C = O), 1597, 1525, 1492, 1460, 1433 (C = C), 1383, 1349 (2SO2), 1170 (SO2NH), 741 (C-Cl). 1H NMR(DMSO-d6, 400 MHz) δ: 1.13–1.15(d, J = 5.73 Hz, 3H), 3.74–3.75(d, J = 6.88 Hz, 2H), 3.97–4.02 (m, 1H), 7.35–7.38 (m, 2H), 7.56–7.59 (m, 2H), 8.01–8.04 (m, 2H), 8.29–8.34 (m, 1H), 8.34–8.36 (m, 2H), 8.49 (s, 1H), 10.02 (s, 1H). 13C NMR (DMSO-d6, 100 MHz) δ: 19.50, 42.81, 52.31 (aliphatic carbon), 120.95, 124.70, 127.30, 128.63, 129.13, 138.17, 147.06, 149.88(aromatic carbon), 167.82, 171.71(carbonyl carbon). HRMS-ESI CI7H18ClN4O6S, found value is (m/z): 441.0634, M + H, calculated value is 441.0635.
N-(2-(3-fluorophenyl)amino)-2-oxoethyl)-2-(4-nitrophenylsulfonamido)propanamide (7c)
Yield 83% melting point 124–126 oC. FTIR (KBr, cm− 1): 3354, 3309 (N-H), 3104 (C-H ArH), 2984, 2935 (C-H aliph), 1671, 1611 (C = O), 1529, 1492, 1446 (C = C), 1351 (SO2), 1169 (SO2NH), 782 (C-H). 1H NMR(DMSO-d6, 400 MHz) δ: 1.14–1.15(d, J = 4 Hz, 3H), 2.45(s, 3H), 3.05–3.04(d, J = 4 Hz 2H), 3.37(s, 2H), 3.75–3.76 (d, J = 4 Hz 1H), 3.99–4.02 (m, 2H), 6.85–6.88 (m, 2H), 7.24–7.36 (m, 3H), 7.53–7.56 (d, J = 12 Hz, 2H), 8.02–8.04 (d, J = 8 Hz, 1H), 8.32–8.35 (m, 2H). 13C NMR (DMSO-d6, 100 MHz) δ: 19.50, 40.11, 52.29 (aliphatic carbon), 106.05, 110.09, 115.10, 124.70, 128.63, 130.84, 130.93, 147.o1, 149.83, 157.98 (aromatic carbon), 168.06, 171.13(carbonyl carbon). HRMS-ESI CI7H18FN4O6S, found value is (m/z): 425.0925, M + H, calculated value is 425.0922.
N-(2-(4-fluorophenyl)amino)-2-oxoethyl)-2-(4-nitrophenylsulfonamido)propanamide (7d)
Yield 72% melting point 180–182 oC. FTIR (KBr, cm− 1): 3388, 3343 (NH), 3111, 3067(C-H ArH), 2971, 2870 (C-H), 1649, 1613 (2C = O), 1525, 1510, 1461, 1448, 1432 (C = C), 1386, 1350 (SO2), 1171 (SO2NH), 686 (C-Fl). 1H NMR (DMSO-d6, 400 MHz) δ: 1.10 (s, 1H), 3.70 (s, 2H), 3.96 (s, 31), 7.12 (s, 1H aro), 8.31 (s, 2H), 8.46 (m, 2H aro), 9.91, (s, 1H NH). 13C NMR (DMSO-d6 100 MHz) δ: 19.41, 42.73, 52.32 (aliphatic carbon), 115.67, 115.89, 121.11, 121.19, 124.70, 128.63, 135.53, 147.03, 149.88, 137.24 (aromatic carbon), 167.55, 171.69 carbonyl carbon. HRMS-ESI CI7H17FN4O6, found value is (m/z): 424.0854, M+, calculated value is 424.0852.
2-(4-nitrophenylsulfonamido)-N-(2-oxo-2-(p-tolylamino)ethyl)propanamide (7e)
Yield, 76%, melting point, 140–142 oC. FTIR (KBr, cm− 1): 3323, 3270 (N-H), 3102, 3070 (C-H ArH), 2977, 2936 (C-H), 1707, 1669 (C = O), 1351 (SO2), 1170 (SO2NH). 1H NMR (DMSO-d6, 400 MHz) δ:1.13–1.15(d, J = 8 Hz, 2H), 2.24(s, 3H), 3.71–3.73(d J = 8 Hz 2H), 3.99–4.01(d, J = 8 Hz, 2H), 4.87–4.90(d, J = 12 Hz, 1H), 7.09–7.11(d, J = 8 Hz, 3H), 7.43–7.46(m, 2H), 8.02–8.04(d, J = 8 Hz, 1H), 8.30–8.44(m, 3H), 8.53 (s, broad 1H). 13C NMR (DMSO-d6, 100 MHz) δ: 19.49, 42.73, 46.15, 52.32 (aliphatic carbon) 119.40, 124.72, 128.63, 129.60, 131.12, 132.63, 136.65, 143.51, 147.02, 149.84, 151.16, 157.60, 165.21(aromatic carbon) 167.37, 171.66(carbonyl carbon). HRMS-ESI C18H20N4O6S found value is (m/z): 420.1105, M+, calculated value is 420.1104.
2-(4-nitrophenylsulfonamido)-N-(2-oxo-2-(phenylamino)ethyl)propanamide (7f)
Yield 81% melting point 126–128 oC. FTIR (KBr, cm− 1): 3273 (N-H), 3105 (C-H, ArH), 1703, 1669 (C = O), 1601, 1526, 1499, 1446 (C = C), 1350 (SO2), 1169 (SO2NH).1H NMR (DMSO-d6, 400 MHz) δ:1.13–1.16 (m, 2H), 1.61–1.63(d, J = 8 Hz 3H), 1.98(s, 3H), 2.49–2.50 (m, 2H), 3.74–3.75(d, J = 4 Hz, 1H), 3.99–4.03(m, 1H), 7.02–7.07(m, 2H), 7.28–7.33(m, 3H), 7.56–7.59 (m, 3H), 8.02–8.04 (d, J = 8 Hz, 1H), 8.35–8.43 (m 2H), 8.54 (s, 1H), 9.91 (s, 1H). 13C NMR (DMSO-d6, 100 MHz) δ: 14.53, 19.50, 22.53, 31.42, 42.20, 46.03, 52.33 (aliphatic carbon), 119.39, 123.75, 124.74, 128.53, 131.12, 139.21, 143.51, 149.85, 151.16(aromatic carbon) 166.22, 171.70(carbonyl carbon). HRMS-ESI C17H18N4O6S found value is (m/z): 406.0949, M+, calculated value is 406.0947.
N-(2-(naphthalene-2-ylamino)-2-oxoethyl)-2-(4-nitrophenylsulfonamido)propanamide (7 g)
Yield 76% melting point 198–200 oC. FTIR (KBr, cm− 1): 3319, 3253 (2NH), 3109, 3016 (C-H Ar), 2967, 2928 (C-H), 1665, 1637 (2C = O), 1601, 1552, 1460, 1431 (C = C), 1395, 1352 (SO2), 1172 (SO2NH). 1H NMR (DMSO-d6 400 MHz) δ: 1.15–1.16(d, J = 4 Hz, 3H), 3.93–3.94 (d, J = 4.4 Hz, 2H), 4.00-4.04 (m, 1H), 7.47–7.55 (m, 3H), 7.76–7.78 (d, J = 8.4 Hz, 1H), 7.93–7.95 (m, 1H), 8.03–8.05 (d, J = 8.0 Hz, 3H), 8.35–8.37 (d, J = 8.4 Hz, 3H), 8.50–8.52 (d, J = 7.6 Hz, 1H), 9.86 (s, 1H). 13C NMR (DMSO-d6, 100 MHz) δ: 19.45, 52.39 (aliphatic carbon), 123.11, 124.75, 126.00, 126.29, 126.53, 128.58, 128.63, 133.58, 134.16, 147.11, 149.88, 171.83 aromatic carbon). HRMS-ESI C21H20N4O6S found value is (m/z): 456.1108, M+, calculated value is 456.1104.
N-(2-morpholino-2-oxoethyl)-2-(4-nitrophenylsulfonamido)propanamide (7 h)
Yield 68% melting point 120–122 oC FTIR (KBr, cm− 1): 3338, 3263 (N-H), 3108 (C-H Ar), 2971, 2929 (C-H aliph), 1679, 1644 (C = O), 1518, 1451 (C = C), 1352 (SO2), 1163 (SO2NH). 1H NMR (DMSO-d6, 400 MHz) δ: 1.09–1.10 (d, J = 4 Hz, 3H), 3.23–3.42 (m, 2H), 3.53–3.54 (d, J = 4 Hz, 1H), 3.78–3.79 (d, J = 4 Hz, 2H), 3.99–4.03 (m, 1H), 8.00-8.07 (m 2H Ar), 8.34–8.43 (m, 1H Ar), 8.50–8.52 (d, J = 8 Hz, 1H).13C NMR (DMSO-d6, 100 MHz) δ: 19.46, 42.09, 44.84, 52.29, 56.47, 66.35, 66.41(aliphatic carbon), 124.76, 128.59, 147.06, 149.86(aromatic carbon), 167.08, 171.33(carbonyl carbon). HRMS-ESI C15H20N4O7S found value is (m/z): 400.1057, M+, calculated value is 400.1053.
Yield 78% melting point 118–120 oC FTIR (KBr, cm− 1): 3329 (NH), 3102 (C-H Ar), 2939, 2857 (C-H aliph), 1669 (CO), 1593, 1534, 1483, 1449 (C = C), 1374 (SO2), 1162 (SO2NH), 781 (C-Cl). 1H NMR (DMSO-d6, 400 MHz) δ: 0.82 (s, 3H), 1.10–1.12 (d, J = 8 Hz, 3H), 2.05 (s, 1H), 3.76 (s, 3H), 7.08 (s, 1H), 7.39–7.95 (m, 2H), 8.20 (s, 1H), 10.07–10.31 (m,2H).13C NMR (DMSO-d6, 100 MHz) δ:18.99, 24.59, 43.06, 52.26(aliphatic carbon), 110.13, 118.87, 119.53, 127.87, 127.59, 128.21(aromatic carbon), 130.59, 143.26(carbonyl carbon). HRMS-ESI C19H21ClN4O5S found value is (m/z): 452.0919, M+, calculated value is 452.0921.
2-((4-acetamidophenyl)sulfonamido)-N-(2-((4-chlorophenyl)amino)-2-oxoethyl)propanamide (7j)
Yield 78%, melting point 182–184 oC. 1H NMR (DMSO-d6, 400 MHz) δ: 1.04–1.06 (d, J = 8 Hz, 2H), 2.06 (s, 2H), 3.75–3.78 (d, J = 12 Hz, 2H ), 3.82–3.86 (m, 1H), 7.34–7.36 (d, J = 8 Hz, 1H ArH), 7.59–7.61 (d, J = 8 Hz, 1H), 7.73 (s, 1H), 7.92–7.94 (d, J = 8 Hz, 2H aro), 8.19 (s, 1H), 10.29(S, 1H). 13C NMR (DMSO-d6, 100 MHz) δ: 19.03, 24.58, 43.08, 52.31 (aliphatic carbon), 118.90, 121.05, 127.31, 128.19, 134.87, 138.16, 143.27(aromatic carbon), 167.92, 169.42, 172.28(carbonyl carbon). HRMS-ESI C19H21ClN4O5S found value is (m/z): 452.0925, M+, calculated value is 452.0921.
2-((4-acetamidophenyl)sulfonamido)-N-(2-((3-fluorophenyl)amino)-2-oxoethyl)propanamide (7 k)
Yield 82% melting point 128–130 oC. FTIR (KBr, cm− 1): 3330 (NH), 3111, 2988 (C-H Ar), 2988, 2930 (C-H), 1674, 1647 (C = O), 1593, 1534, 1494, 1446 (C = C), 1376, 1321 (SO2), 1161 (SO2NH), 637(C-F). 1HNMR(DMSO-d6 400 MHz) δ: 1.04–1.06 (d, J = 6.8 Hz, 3H), 2.07 (s, 3H), 3.76–3.84 (m, 1H), 4.02–4.03 (d, J = 6.8 Hz, 2H), 6.86–6.90 (m, 2H), 7.22–7.37 (m, 2H), 7.55–7.57 (d, J = 8 Hz 2Hz), 7.69–7.94 (m,4H), 8.18–8.21 (m, 1H), 10.06 (s, 1H), 10.29 (s, 1H). 13C NMR (DMSO-d6, 400 MHz) δ: 19.00, 24.58, 43.10, 52.30 (aliphatic carbon), 106.17, 106.43, 110.32, 115.25, 118.91, 128.20, 130.85, 130.94, 140.86, 140.97, 143.27, 163.79(aromatic carbon) 168.15, 169.40, 172.30(carbonyl carbons).HRMS-ESI C19H21ClN4O5S found value is (m/z): 436.1218, M+, calculated value is 436.1217.
2-((4-acetamidophenyl)sulfonamido)-N-(2-((4-fluorophenyl)amino)-2-oxoethyl)propanamide (7 l)
Yield 79% melting point 180–182 oC. FTIR (KBr, cm− 1): 3415, 3161 (N-H), 3108 (CH aro), 2938 (C-H aliph), 1679, 1649 (C = O), 1592, 1573, 1529, 1506, 1452 (C = C), 1374 (SO2), 1168 (SO2NH), 799 (C-F). 1H NMR (DMSO-d6 400 MHz) δ: 1.98 (s, 3H), 2.07 (s, 1H), 3.01–3.07(m, 1H), 3.74–3.87(m, 3H), 4.02–4.03(d J = 7.2 Hz, 1H), 7.12–7.22(m, 2H), 7.56–7.61(m, 2H), 7.71–7.76(m, 5H), 7.93–7.79 (d, J = 6.8 Hz 2H), 8.12–8.21(m, 1H), 9.90(s, 1H), 10.51(s, 1H). 13C NMR (DMSO-d6, 100 MHz) δ: 14.53, 19.00, 21.21, 24.58, 43.01, 52.34(aliphatic carbon). 115.68, 115.90, 118.91, 121.23, 121.30, 127.12, 128.20, 134.84, 135.58, 143.28, 157.26 (aromatic carbon), 167.67, 169.43, 172.27(carbonyl carbon).HRMS-ESI C19H21ClN4O5S found value is (m/z): 436.1217, M+, calculated value is 436.1217.
2-((4-acetamidophenyl)sulfonamido)-N-(2-oxo-2-(p-tolylamino)ethyl)propanamide (7 m)
Yield 68% melting point 178–180 oC. FTIR (KBr, cm− 1): 3296, 3161 (N-H), 3044 (C-H aro), 2992, 2931 (C-H aliph), 1669, 1650 (C = O), 1534, 1429, 1592 (C = C), 1370 (SO2), 1165 (SO2NH). 1H NMR (DMSO-d6, 400 MHz) δ: 1.04–1.05 (d, J = 6.4 Hz, 3H), 2.07(s,3H), 2.24(s, 3H), 3.74–3.84(m, 3H), 3.96–4.03(m, 2H), 7.09–7.11(d, J = 7.2 Hz, 2H), 7.44–7.46(d, J = 7.6 Hz, 4H), 7.73(s, 2H), 7.92–7.95(d, J = 7.2 Hz, 1H), 8.17(s, 1H), 9.72(s, 1H), 10.26(s, 1H). 13C NMR (DMSO-d6 400 MHz) δ: 18.97, 20.88, 24.59, 43.04, 52.33 (aliphatic carbon), 118.92, 119.54, 128.20, 129.60, 132.67, 134.85, 136.68, 143.28 (aromatic carbon), 167.46, 169.47, 172.23,(carbonyl carbon)HRMS-ESI C20H24N4O5S found value is (m/z): 433.1538, M + H, calculated value is 433.1535.
2-((4-acetamidophenyl)sulfonamido)-N-(2-oxo-2-(phenylamino)ethyl)propanamide (7n)
Yield 83% melting point 180–182 oC. FTIR (KBr, cm− 1) δ: 3299, 3259 (N-H), 1702, 1669, 1648 (C = O), 1591, 1537, 1499, 1446 (C = C), 1371 (SO2), 1166 (SO2NH). 1H NMR (DMSO-d6, 400 MHz):1.03–1.05(d, J = 8 Hz 3H), 2.07(s, 3H), 2.45(s, 2H), 3.37(s, 3H), 3.75–3.90(m, 1H), 7.03–7.06(m, 2H), 7.28–7.23(m, 3H), 7.56–7.58(d, J = 8 Hz, 1H), 7.74(s, 1H), 7.97–7.99(d, J = 8 Hz 2H),8.21–8.24(m, 2H), 9.86(s, 1H), 10.32(s 1H).13C NMR (DMSO-d6, 100 MHz) δ: 19.00, 24.60, 43.03, 50.36(aliphatic carbon) 118.89, 119.48, 123.76, 123.91, 128.22, 129.24, 134.82, 139.19, 143.27(aromatic carbon). 116.23, 169.44, 172.26(carbonyl carbon).HRMS-ESI C19H22N4O5S found value is (m/z): 419.1391, M + H, calculated value is 419.1389.
Yield 75% melting point 178–180 oC. FTIR (KBr, cm− 1): 3318, 3257 (NH), 3065 (C-H Aro), 2968, 2931(C-H aliphatic), 1679, 1640 (C = O), 1590, 1523, 1439 (C = C), 1369 (SO2), 1162 (SO2NH). 1H NMR (DMSO-d6, 400 MHz) δ: 1.07–1.08 (d, J = 6.8 Hz, 3H), 2.08 (s, 3H), 3.81–3.99 (d, J = 7.2 Hz, 3H), 7.47–7.51 (m,3H), 7.52–7.54 (m, 1H), 7.65–7.67 (d, J = 6.0 Hz, 2H), 7.27–7.80 (m, 5H), 7.92–7.94 (m, 2H), 7.98–7.99 (d, J = 5.2 Hz, 2H), 8.06–8.08 (d, J = 5.2 Hz, 1H), 8.34 δ (s, 1H), 9.92(s, 1H), 10.56(s, 1H).13CNMR (DMSO-d6 100 MHz) δ: 18.98, 24.56, 43.16, 52.45, (aliphatic carbon), 118.947, 122.093, 123.267, 125.847, 126.004, 126.293, 126.511, 128.146, 128.514, 133.603, 134.142, 135.806, 143.386 (aromatic carbon), 168.66, 169.56, 172.42(carbonyl carbon). HRMS-ESI C23H24N4O5S found value is (m/z): 467.1388, M-H, calculated value is 468.1389.
2-((4-acetamidophenyl)sulfonamido)-N-(2-morpholino-2-oxoethyl)propanamide (7p)
Yield 80% melting point 110–114 oC. FTIR (KBr, cm− 1), 3269 (NH), 3187 (C-H aro), 2983, 2930 (C-H aliphatic), 1682 (C = O), 1591, 1533, 1496 (C = C), 1367 (SO2), 1161(SO2NH).13CNMR(DMSO-d6 100 MHz) δ: 19.04, 21.35, 24.65, 52.31 (aliphatic carbon), 110.04, 118.30, 120.23, 125.83, 128.17, 129.59, 131.05, 135.00, 143.21, 145.34 (aromatic carbon) 167.09, 169.44, 171.21 (Carbonyl carbon). HRMS-ESI C17H24N4O6S found value is (m/z): 412.1419, M+, calculated value is 412.1417.
2-(4-chlorophenylsulfonamido)-N-(2-((3-chlorophenyl)amino)-2-oxoethyl)propanamide (7q)
Yield 78% melting point 140–142 oC FTIR (KBr, cm− 1): 3341 (NH), 3082 (C-H Ar), 2979 (C-H), 1693, 1665 (C-H ArH), 1598, 1531, 1499, 1445 (C = C), 1324 (SO2), 1167 (SO2NH) 1H NMR (DMSO-d6, 400 MHz) δ:1.10–1.10 (d, J = 8 Hz 3H), 1.16–1.18 (m, 1H), 2.45 (s, 2H), 3.05–3.07 (d, J = 8 Hz, 1H), 3.37 (s, 1H), 3.78–3.80 (m, 2H), 3.85–3.91 (m,1H), 7.09–7.11 (d, J = 8 Hz, 1H), 7.31–7.35 (m, 2H), 7.42–7.44 (d, J = 8 Hz 3H), 7.59–7.73 (m, 1H), 7.79–7.81 (d J = 8 Hz 1H), 8.12–8.29 (m, 2H). HRMS-ESI C17H17Cl2N4O6S found value is (m/z): 430.0398, M + H, calculated value is 430.0395.
2-(4-chlorophenylsulfonamido)-N-(2-((4-chlorophenyl)amino)-2-oxoethyl)propanamide (7r)
Yield 84% mp 184–186 oC. FTIR (KBr, cm− 1): 3325, 3259 (2NH), 3159, 3088 (C-H Ar), 2988, 2968 (C-H), 1672, 1646 (C = O), 1553, 1534, 1513, 1477 (C = C), 1389, 1333 (SO2), 1116 (SONH), 682 (C-Fl). 1H NMR (DMSO-d6 400 MHz) δ: 1.08–1.09 (d, J = 5.2 Hz, 3H), 3.76-83 (m, 1H), 7.14 (s, 2H), 7.59 (s, 3H), 7.78–7.79 (d, J = 6.8 Hz, 3H), 8.18–8.25 (m, 3H), 9.93 (s, 1H) 13C NMR (DMSO-d6, 100 MHz) δ: 19.28, 42.83, 52.28 (Aliphatic carbon), 115.68, 115.91, 121.18, 121.26, 128.98, 129.53, 135.61, 137.64, 148.32(aromatic carbon), 167.62, 171.94(carbonyl carbon). HRMS-ESI C17H17Cl2N4O6S found value is (m/z): 430.0396, M + H, calculated value is 429.0395.
2-(4-chlorophenylsulfonamido)-N-(2-((3-fluorophenyl)amino)-2-oxoethyl)propanamide (7 s)
Yield 81% melting point 158–160 oC. FTIR (KBr, cm− 1): 3325, 3269 (N-H), 3091 (C-H aro), 2987, 2967 (C-H aliph), 1646, 1612 (C = O), 1546, 1491, 1478, 1446 (C = C), 1332 (SO2), 1166 (SO2NH), 776 (C-F). 1H NMR (DMSO-d6, 400 MHz) δ: 1.09–1.11 (d, J = 8 Hz, 3H), 3.79–3.80 (d, J = 4 Hz, 1H), 3.89–3.93 (m, 1H), 6.85–6.89 (m, 2H), 7.27–7.37 (m, 3H), 7.58–7.61 (m, 3H), 7.79–7.81 (d, J = 8 Hz, 1H), 8.24–8.26 (d, J = 8 Hz, 2H), 8.32–8.35 (m, 3H), 10.16 (s, 1H). 13C NMR (DMSO-d6, 100 MHz) δ: 24.05, 47.66, 57.00 (aliphatic carbon), 110.87, 111.13, 114.84, 115.05, 119.91, 133.74, 134.29, 135.59, 135.59, 135.66, 142.40, 145.04, 145.16 (aromatic carbon) 168.55, 176.76 (carbonyl carbon). HRMS-ESI C17H17FN4O6S found value is (m/z): 413.0615, M+, calculated value is 413.0612.
2-(4-chlorophenylsulfonamido)-N-(2-((4-fluorophenyl)amino)-2-oxoethyl)propanamide (7t)
Yield 79% melting point 160–162 oC. FTIR (KBr, cm− 1): 3341, 3262 (2NH), 3088, 3114 (C-H Ar), 2974, 2935 (C-H), 1675, 1647 (2C = O), 1595, 1526, 1491, 1451 (C = C), 1401, 1352 (SO2), 1168 (SO2NH), 755 (C-Cl). 1H NMR (DMSO-d6, 400 MHz) δ: 1.083 (s, 1H), 2.49 (s, 2H), 3.36 (s, 3H), 3.76–3.88 (d, J = 4.8 Hz 2H), 7.37 (s, 1H), 7.59–7.60 (d, J = 4 Hz, 2H), 7.77 (s, 1H), 8.22–8.30 (m, 2H), 10.06 (s 1H). 13C NMR (DMSO-d6, 100 MHz) δ: 19.30, 42.85, 52.23 (aliphatic carbon), 120.97, 127.27, 128.98, 129.17, 137.63, 138.19, 140.29 (aromatic carbon) 167.90, 171.96(carbonyl carbon). HRMS-ESI C17H17FN4O6S found value is (m/z): 413.0618, M+, calculated value is 413.0612.
2-(4-chlorophenylsulfonamido)-N-(2-oxo-2-(p-tolylamino)ethyl)propanamide (7u)
Yield 82% melting point 180–182 oC. FTIR (KBr, cm− 1): 3328, 3271 (N-H), 1671, 1646 (C = O), 1600, 1533, 1477 (C = C), 1345 (SO2), 1168 (SO2NH), 757 (C = Cl). 1H NMR (DMSO-d6, 400 MHz) δ: 1.08–1.10 (d, 6.8 Hz, 3H), 3.06 (s, 3H), 3.75–3.77 (m, 2H), 3.87–3.90 (m, 1H), 7.09–7.12 (d, J = 8 Hz, 2H), 7.45–7.47 (d, J = 8 Hz, 2H), 7.59–7.62 (d, J = 8 Hz, 2H), 7.78–7.81 (d, J = 8.8 Hz, 2H), 8.18–8.24 (m, 2H), 9.77 (s, 1H) 13C NMR (DMSO-d6, 100 MHz) δ: 19.27, 20.88, 42.87, 52.30 (aliphatic carbon), 119.51, 128.99, 129.55, 129.61, 132.66, 136.66, 136.66, 137.66, 140.32 (aromatic carbon), 167.42, 171.91(carbonyl carbon).HRMS-ESI C18H20ClN3O4S found value is (m/z): 427.1075, M + NH4, calculated value is 427.1078.
Yield 89% melting point 160–162 oC FTIR (KBr, cm− 1): 326, 3262 (N-H), 3086, 3063 (C-H aro), 2988, 2967 (C-H aliph), 1670, 1644 (C = O), 1602, 1549, 1529, 1498, 1476 (C = C), 1332 (SO2), 1165 (SO2NH), 754 (C = Cl). 1H NMR (DMSO-d6, 400 MHz) δ: 1.09–1.11 (d, J = 8 Hz, 3H), 3.77–3.79 (m, 1H), 3.88–3.92 (m, 1H), 7.02–7.06 (m, 2H), 7.28–7.33 (m, 3H), 7.57–7.62 (m, 1H), 7.79–7.81 (d, J = 8 Hz 1H), 8.23–8.25 (d, J = 8 Hz, 1H), 8.29–8.32 (m, 2H), 9.91 (s, 1H). 13C NMR (DMSO-d6, 100 MHz) δ: 19.31, 42.89, 52.28 (aliphatic carbon), 119.45, 123.76, 129.00, 129.26, 129.55, 137.66, 138.23, 140.29 (aromatic carbon), 161.71, 171.71(carbonyl carbon).HRMS-ESI C17H18ClN3O4S found value is (m/z): 395.0704, M+, calculated value is 395.0706.
2-((4-chlorophenyl)sulfonamido)-N-(2-(naphthalene-2-ylamino)-2-oxoethyl)propanamide (7w)
Yield 89% melting point 190–192 oC. 1H NMR (DMSO-d6, 400 MHz) δ: 1.08–1.09 (s J = 7.2 Hz, 3H), 3.85 (m, 1H), 4.02–4.04 (d, J = 7.2 Hz, 1H), 7.48–7.55 (m,8H), 7.56–7.62 (m, 4H), 7.64 (d, J = 1.2 Hz, 2H), 7.66–7.69 (m, 3H), 7.77–7.79 (m, 1H), 7.81–7.81 (m, 2H), 7.93–7.96 (m, 5H), 8.06–8.13 (m, 4H), 8.29–8.31 (d, J = 5.2 Hz, 2H), 9.85 (s, 1H). 13C NMR (DMSO-d6, 100 MHz) δ: 19.05, 43.10, 52.39 (aliphatic carbon), 122.00, 123.16, 125.85, 126.03, 126.31, 126.54, 127.00, 127.18, 128.17, 128.57, 129.49, 129.67, 132.88, 133.59, 134.16, 141.37 (aromatic carbon), 168.59, 172.24 (carbonyl carbon).HRMS-ESI C21H20ClN3O4S found value is (m/z): 468.0864, M + Na, calculated value is 468.0863.
2-(4-chlorophenylsulfonamido)-N-(2-morpholino-2-oxoethyl)propanamide (7x)
Yield 67% melting point 110–112 oC. FTIR (KBr, cm− 1): 3296 (N-H), 3091 (C-H aro), 2983, 2928 (C-H aliph), 1660, 1629 (C = O), 1585, 1549, 1475 (C = C), 1361 (SO2), 1159 (SO2NH). 1H NMR (DMSO-d6, 400 MHz) δ: 1.04–1.06 (d, J = 8 Hz, 3H), 3.37–3.55 (m, 1H), 3.82 (s, 2H), 3.87–3.92 (m, 2H), 7.60–7.62 (d, J = 8 Hz 3H), 7.71–7.73 (d, J = 8 Hz, 1H), 7.77–7.79 (d, J = 8 Hz, 3H), 7.99 (s, 1H), 8.11 (s, 2H), 8.22–8.24 (d, J = 8 Hz, 2H). 13C NMR (DMSO-d6, 100 MHz) δ: 19.27, 42.13, 44.87, 52.24, 66.36, 66.44 (aliphatic carbon), 128.97, 129.55, 129.69, 129.90, 130.48, 131.45, 137.60, 140.38 (aromatic carbon), 167.07, 171.52(carbonyl carbon).HRMS-ESI C15H20ClN3O5S found value is (m/z): 388.0736, M-H, calculated value is 388.0734.
Molecular Modeling
Homology modeling of target protein and Docking
Since there is no three-dimensional (3-D) structure of Plasmodium falciparum dihydropteroate synthase (Pfdhps) in Protein Databank, the crystal structure of Pfdhps was homology modeled using the Pfdhps sequence fragment retrieved from UniprotKB database as the target sequence (A0A3G2LE00_PLAFA).38 SWISS-MODEL39 use their own set of modeling algorithm to automatically build model using P. vivax homodimer (PDB code: 5Z79; resolution 1.7 Å)40 as template. The constructed model was subjected to molecular dynamics simulation using GROMOS96 force field.41 The system was placed in a cubic box simple point charge (SPC) and solvated using an explicit water model for all atom simulation. The protein had at least 10 Å buffer in every direction of the box. The system was maintained at a neutral charge while adjusting the NaCl concentration to 150 mM and equilibrated at 300 K using Berendsen’s algorithm. The entire system was subjected to energy minimization using both the steepest descent and the conjugate gradient algorithms. All non-hydrogen atoms were subsequently restrained in position while solvent molecules and ions were allowed to relax around the solute molecules for a simulation time of 1000 ps. The evolutions of all quantities considered in this study were recorded per 1 ns. The accuracy of the built Pfdhps_model was evaluated by backbone conformation analysis using Psi/Phi Ramachandran plot package in Discovery Studio,42 stability of the protein structure of MD simulation and alignment to P. vivax homodimer template. In order to dock the newly synthesized sulfa compounds, the binding site of Pfdhps_model was identified using the online program – COACH.43
The chemical structures of the compounds were prepared using the builder protocol in Molecular Operating Environment (MOE) software44 and energy minimized to 0.001 kcal/mol gradient. Molecular descriptors employed in calculating the following basic physicochemical features: molecular weight (MW), hydrogen bond acceptor (HBA), hydrogen bond donor (HBD), lipophilicity (logP), number of rotatable bond (NRB) and total polar surface area (TPSA) were computed using the QuSAR module of MOE. Docking of the compounds toward Pfdhps_model binding site was performed using “triangle” matcher as placement and “affinity dG” for scoring and force field refinement was also applied.
Biological activities
In vitro antiplasmodial activity
The effect of the synthesized compounds (7a-7x) in vitro was evaluated against P. falciparum (W2 strain). Briefly, sorbitol synchronized, 0.1% parasitemia, ring stage P. falciparum strain W2 parasites were cultured under the atmosphere of 3% O2, 6% CO2 and 91% N2 in RPMI-1640 medium supplemented with 10% human serum in the presence of inhibitors for 48 h without media change. Inhibitors were added from 1000 DMSO stocks. After 48 h, the culture medium was removed and replaced with 1% formaldehyde in PBS pH 7.4 for an additional 48 h at room temperature to fix cells. Fixed parasites were transferred into 0.1% Triton-X-100 in PBS containing 1 nM YOYO-1 dye (Molecular Probes). Parasitemia was determined from dot plots (forward scatter vs. fluorescence) acquired on a FACS sort flow cytometer using Cell Quest software (Beckton Dickinson). The MICs of compounds were the minimum concentrations at which more than 99% of the parasites, relative to the control, were inhibited from developing to Schizonts (parasites with six or more chromatin dots)45 [33].
In vivo antiplasmodial activity
In vivo antimalarial activity of the synthetic compounds (7a-7x) was carried out against P. berghei (NK-65 strain) infected mice as described by Peter et al46 and Kalra et al47 with minor modifications. The animals were obtained from Nigerian Institute for Trypanosoma and Onchocercarioses Research (NTIR) Vom, Plateau State Nigeriaand were kept under standard conditions for 7 days to adapt to the laboratory animal housing facilities. The permission and approval for the use of animals were granted by the Animal Ethics Committee, Federal College of Veterinary Medical Laboratory, Vom, Plateau State. Briefly, eighty infected mice were randomly divided into 27 groups of five mice in each group. The inoculum was preparedfrom a donor mouse with rising parasitemia of 60.42%. By 7 days post-infection, animals were administered with the synthesized compounds (7a-7x) for 12 consecutive days and were monitored with constant check of the percentage of parasitemia after one-day interval. Artemisinin was used as the positive control of the experiment. Group four was not treated and group five was not infected. All the compounds and the drugs were given orally by using a standard intragastric tube. For all parasitemia determination, blood samples were collected from a tail snip of each mouse on days 7 and 8 and thin smears prepared and stained with 10% Giemsasolution. The uniform fields of each stained slide (for each mouse) were examined under microscope with an oil immersion objective of 100x magnification power and percentage inhibition of parasitemiawas calculated comparing the treated group with untreated group by means of the following formula48 [(A-B)/A]x100; where A = parasitaemia in the untreated group and B = parasitemia in the test group. Compounds that reduced parasitemia by 40% were considered active, whereas those that reduce parasitaemia by 30–40% or less than 30% were deemed partially active and inactive respectively.49 Furthermore, the percentage survival rate of each group was determined.
All animal experiments were conducted in compliance with the National Institute of Health Guide for care and use of Laboratory animals (Pub No.85 − 23, revised 1985) and in accordance with the University of Nigeria Ethics committee on the use of laboratory animals, registered by the National Health Research Ethics Committee (NHREC) of Nigeria, with the number; NHREC/05/01/2008B. The study protocol was approved by our institution’s Ethics Committee.50
Biochemical Assessment
By twelfth day post-infection, animals were sacrificed by cervical dislocation and blood samples obtained for further biochemical analysis. Blood samples were collected firstly at the beginning of the experiment (day 0) to assay for basal biochemical levels. Subsequently, blood samples were recollected from the animals on days 7 and 12 post-treatment to re-assay for serum biochemical levels. The blood glucose concentration (BGC) was measured using a One Touch Ultra® glucometer (Lifescan; Johnson & Johnson, Milpitas, CA, USA). The serum creatinine, and albumin, total protein and bilirubin levels were analyzed according to standard methods. Alanine aminotransferase (ALT), aspartate aminotransferase (AST) and alkaline phosphatase (ALP) were assayed using standard procedures. The haematological parameters: red blood cell (RBC) count, packed cell volume (PCV), white blood cell (WBC) count and haemoglobin concentration (HB) were estimated according to standard procedure using an automated machine (Automated CBC Analyser: Sysmex KX-21).
Liver Function Tests (LFTs)
The liver function tests carried out with the blood of the rats fed with the sulphonamide derivatives were aspartate aminotransperase (AST), alanine transaminase (ALT) and alkaline phosphatase (ALP). Standard laboratory procedure according to was used for the determination of parameters51
Renal or Kidney Function Test
Kidney function tests carried out with the blood of the rats fed with the sulphonamide derivatives were, creatinine and albunim. The method reported by52 were used in the determination of creatinine