Plant materials and grown conditions
The seeds of Nicotiana benthamiana were kindly donated by Professor David Baulcombe (Department of Plant Sciences, University of Cambridge, U.K), which were propagated and preserved in this laboratory. Nicotiana benthamiana was grown at the conditions of 24 ± 1℃, 16/8 hours light / dark cycle and forty percent humidity.
The construction of vectors
The full-length of MPCABYV, MPMABYV, and MPSABYV were amplified by PCR using forward and reverse primers (Table 2). The PCR products were recycled by 1.0% agarose gel electrophoresis and linked into the vector pDB.His.MBP (DNASU Plasmid Repository, Arizona, USA) digested with restriction enzymes NdeI and XhoI at 37℃ for more than 4 hours. We transformed the ligation products into E.coli strain MC1022 to obtain the positive clones and extracted plasmids. Sequencing analysis verified the correctness of plasmids. pMDC32-MPCABYV, pMDC32-MPMABYV and pMDC32-MPSABYV were constructed using the same methods [47].
Table 2
Specific primers used for vector construction
Vector Name | Primer Name | primer sequence |
PDB.His.MBP | CABYVMPNdeI | AACCTTTACTTCCAGGGCCATATGCAGGGAGGCGGAGGCGA |
| CABYVMPXhoI | GGTGGTGGTGGTGCTCGAGTCCTATTTCGGGTTTTGGACC |
| MABYVMPNdeI | AACCTTTACTTCCAGGGCCATATGGCATGGGAAGGAGGAGA |
| MABYVMPXhoI | GGTGGTGGTGGTGCTCGAGTCTACCTATTTCGGGTTCTGG |
| SABYVMPNdeI | AACCTTTACTTCCAGGGCCATATGGCATGGGAAGAAGGAGA |
| SABYVMPXhoI | GGTGGTGGTGGTGCTCGAGTCTACCTATTTCGGGTTCTGG |
pMDC32 | CABYVMPKpnI | GGGGTACCATGCAGGGAGGCGGAGGCGA |
| CABYVMPSpeI | GGACTAGTCCTATTTCGGGTTTTGGACC |
| MABYVMPKpnI | GGGGTACCATGGCATGGGAAGGAGGAGA |
| MABYVMPSpeI | GGACTAGTCTACCTATTTCGGGTTCTGG |
| SABYVMPKpnI | GGGGTACCATGGCATGGGAAGAAGGAGA |
| SABYVMPSpeI | GGACTAGTCTACCTATTTCGGGTTCTGG |
Agrobacterium-mediated transformation
The liquid nitrogen freezing and thawing method were used to transform the transient expression vector plasmids into Agrobacterium. 3–5µL plasmids were added into 100µL Agrobacterium competent cells GV3101, which was on the ice for 30 minutes and frozen in liquid nitrogen for 1 minute. Then it was melted at 37℃ for 5 min, and then 400µL LB liquid medium was added. After 4 hours of oscillation resuscitation at 28℃, it was spread on the corresponding resistant LB plate. The transformed agrobacterium competent cells were grown at 28℃ for 48 h.
The purification of recombinant proteins and the development of polyclonal antisera
We transformed three prokaryotic expression vectors containing MP into E.coli strain Rosseta to obtain the positive colonies. Positive colonies were cultured in 10 ml LB liquid medium containing kanamycin (50 mg/ml) and chloramphenicol (34 mg/ml) at 37 ℃ and 220 rpm overnight for oscillating culture. All cultured bacteria were added to 1L LB liquid medium containing kanamycin and chloramphenicol at 37℃, and 220 rpm for oscillating culture for 4–6 h in order to OD600 ranged from 0.6 ~ 0.8. Then the transformed bacteria were induced by shaking at 18℃ and 180 rpm for 18 h and Isopropyl-β-D-thiogalactoside (IPTG; Sigma-Aldrich, St. Louis, MO, USA) was added at a final concentration of 0.1 mM. We collected the bacteria by centrifugation at 5000 rpm for 6 minutes. After Ultrasonic crushing, we collected supernatant by centrifugation at 16000 rpm for 40 minutes. The supernatant was added to a Ni-affinity column (Qiagen, Hilden, Germany) and the proteins were eluted with imidazole eluent of different concentrations (20 mM, 40 mM, 60 mM, 80 mM, 100 mM, 200 mM, and 500 mM). Each elution was subjected to SDS-PAGE for detecting whether MP was expressed and elution containing MP was concentrated to obtain purified fusion proteins.
The three fusion proteins then were immunized New Zealand white rabbits. When the immunization was completed, positive blood was taken from the carotid artery of New Zealand white rabbits, after centrifuged twice at 5000 rpm for 10 min, 30 ml of polyclonal antisera against MPCABYV, MPMABYV and MPSABYV were obtained respectively. (Beijing Protein Innovation Co.Ltd conducted the rabbit immunization).
Western blotting assay
Proteins were separated by SDS-PAGE and then transferred to the nitrocellulose membrane (GE Healthcare, Buckinghamshire, UK) by electrotransfer (200 mA, 100 min). The NC membrane was blocked in 1 × TBST buffer (20 mM Tris-HCl, 150 mM NaCl, 0.05% Tween-20, pH = 8.0) containing 5% milk at 37℃ for 1 h, followed by incubated with polyclonal antisera against MPCABYV, MPMABYV and MPSABYV at 37℃ for 1 h. Subsequently, We washed the membrane with 1 × TBST for three times and incubated the NC membrane with AP-labeled goat anti-rabbit IgG secondary antibody (Easybio, China) diluted to 1:20000 at 37℃ for 1 h. After washing the membrane with 1 × TBST for three times, we incubated the NC membrane with the buffer containing NBT (330 µg.mL− 1) and BCIP (165 µg.mL− 1) to show corresponding bands.
Titer determination of the three antisera
pMDC32-MPCABYV, pMDC32-MPMABY and pMDC32-MPSABYV (OD600 = 0.5) was co-expressed with P19 (OD600 = 0.2) in N. benthamiana, and the pMDC32 empty vector served as the negative control. Leaves were collected at three dpi for extracting total protein. All the three antisera were equally diluted followed by 1:1000, 1:2000, 1:4000, 1:8000, 1:16000, 1:32000, 1:64000, 1:128000, 1:256000 and 1:512000 in Western blotting experiments to determine its titer and optimal working concentration.
Sensitivity analysis of the three antisera
pMDC32-MPCABYV, pMDC32-MPMABYV and pMDC32-MPSABYV (OD600 = 0.5) were co-expressed with P19 (OD600 = 0.2) in N. benthamiana and the pMDC32 empty vector served as the negative control. Leaves were collected at 3 dpi for extracting total protein. We weighed 0.1 g of N. benthamiana leaves and added 300 µL 2xSDS buffer to prepare protein samples. The samples were diluted by two gradients (1:4, 1:8, 1:16, 1:32, 1:64, 1:128, 1:256, 1:512, 1:1024 and 1:40, 1:80, 1:160, 1:320, 1:640) in Western blotting experiments. Meanwhile, all three antisera were diluted to 1:1000, 1:10000, and 1:20000 respectively.
Specificity analysis of the three antisera
MPCABYV, MPMABYV, MPSABYV, 3Flag-MPBrYV, 3Flag-MPPLRV and 3Flag-MPScYLV (OD600 = 0.5) was co-expressed with P19 (OD600 = 0.2) in N. benthamiana, and the pMDC32 empty vector served as the negative control. Leaves were collected at 3 dpi for extracting total protein. We performed western blotting to detect specificity of the antisera. The three antisera were all diluted at the ratio of 1:1000, 1:10000 and 1:20000 respectively.
Detection of N. benthamiana inoculated with full-length infectious clones
We inoculated N. benthamiana with the full-length infectious clone of CABYV and MABYV [48–49]. Transient expression vectors pMDC32-MPCABYV and pMDC32-MPMABYV served as the positive control and the pCass-RZ empty vector served as the negative control. Western blotting was performed using antisera at 1:10000, which was compared with the RT-PCR detection of the same sample.
Simulation detection of natural host plants with infected virus
Total proteins from N. benthamiana leaves expressing MPCABYV, MPMABYV and MPSABYV were extracted followed by the same dilution ratio as healthy cucumber leaves (1:4). Then we mixed them with equal volume, which was equally diluted by 1:16, 1:32, 1:64, 1:128, 1:256 and 1:512. N. benthamiana leaves expressing the pMDC32 empty vector, and healthy cucumber leaves served as the negative controls. While N. benthamiana leaves expressing MPCABYV, MPMABYV and MPSABYV served as the positive control respectively. Then we conducted Western blotting using antisera at 1:10000 to simulate the serological detection of CABYV, MABYV and SABYV in the natural host cucumber.