The contribution of Viola Weichelt and Dennis Knierim (Leibniz Institute DSMZ) in library preparation and bioinformatics analysis is deeply acknowledged.
Compliance with ethical standards
This article does not contain any studies with human participants or animals performed by any of the authors. Plant samples were collected under Genetic Resource Access Permit # MAE–DNB–CM–2018–0098 granted by the Department of Biodiversity of the Ecuadorean Ministry of the Environment.
European Virus Archive Global (EVAg) project, through the European Union’s Horizon 2020 research and innovation program under grant agreement No 871029. National Science Foundation EAGER 1912025 to AES, National Science Foundation MCB-1818229 to AES, and USDA NIFA Emergency Citrus Disease Research and Extension Program 2020-08455 to AES.
Conflict of interest declaration
The authors declare no conflict of interest.
Study conception and design: D.F. Quito-Avila. Material preparation and data collection were performed by E.G. Reyes-Proaño and A. Mendoza. HTS and bioinformatics analyses were performed under the supervision of P. Margaria and W. Menzel. Sequence and phylogenetic analyses were performed by D.F. Quito-Avila, S. Bera and A.E. Simon. The first draft of the manuscript was written by D.F. Quito-Avila and A.E. Simon; all authors commented on previous versions of the manuscript. All authors read and approved the final manuscript.
The genomic sequences of the two viruses reported here have been deposited in the GenBank under accession numbers: OM937759 and OM937760.