Cell culture
Human GC cell lines HGC27 and AGS cells were purchased from the Chinese Academy of Sciences Cell Bank (Shanghai, China). All the cell lines were cytogenetically by STR analysis. HGC27 cells were cultured in RPMI-1640 medium and AGS cells were cultured in F12k containing 10% fetal bovine serum (FBS) at 37°C in 5% CO2.
Chemicals and reagents
Vortioxetine hydrobromide (CAS number 960203-27-4) was purchased from Beijing Bailing wei Technology Co. Ltd. The primary antibodies pY705-STAT3(9145S), pS727-STAT3(9134S), STAT3 (9139S), JAK2(3230S), pY1007/1008-JAK2(3771S), SRC (2108S) were purchased from Cell Signaling Technology (Danvers, MA, USA). pY419-SRC (ab185617), Recombinant JAK2 protein (ab42619), Ki67(ab16667) were purchased from Abcam (Cambridge, MA, USA). STAT3 (sc-8019), pY705-STAT3 (sc-8059), Mcl-1 (sc-12756) and Bcl-2 (sc-7382) were from Santa Cruz (Dallas, TX, USA); GAPDH was from Good Here Biological Technology Co. Ltd. (Hangzhou, Zhejiang, China). The secondary antibodies anti-rabbit IgG (ZB-2301) and anti-mouse IgG (ZB-2305) were from Zhongshan Jinqiao (Beijing, China).
Cytotoxicity assay
HGC27 (6000 cells/well) and AGS (8000 cells/well) were plated on 96-well plates and treated with different doses of vortioxetine hydrobromide (0, 3.125, 6.25, 12.5, 25, 50 µM). After 24, 48 h, the cells were fixed with 4% paraformaldehyde for 30 min in a room temperature. Then the cells were stained with DAPI (1:10000) in the dark and counted using IN Cell Analyzer 6000 software.
MTT assay
GC cells (3000 cells/well) were plated on 96-well plates and treated with different doses of vortioxetine hydrobromide (0, 0.5, 1, 2, 4 µM). Plates were taken out at 0, 24, 48, 72 or 96 h. 10 µL of MTT (5 mg/mL) was added to each well and cells were incubated at 37 ℃ for 2–3 h. The medium was then aspirated from the plates and replaced with 100 µL of DMSO. The absorbance at 490 nm was measured using a microplate reader.
Anchorage-independent cell growth
Eagle’s Basal Medium (BME) with 0.4% agar was added to each well of a 6-well plate and solidified at room temperature for 1.5 h. HGC 27 and AGS cells (8000 /well) were suspended in Eagle’s Basal Medium (BME) containing 0.2% agar with different doses of vortioxetine hydrobromide (0, 0.5, 1, 2 and 4 µM). After incubation for 2 h at room temperature, cells were maintained in a 37°C, 5% CO2 incubator for 9 days, and then the clones were counted and scanned using IN Cell Analyzer 6000 software.
Colony formation assay
GC cells (300/well) were seeded into 6-well plates and treated with different doses of vortioxetine hydrobromide (0, 0.5, 1, 2 and 4 µM). The medium was replenished with fresh medium containing vortioxetine hydrobromide every 3 days. After incubation for 10 days, the medium was then aspirated from the plates. The clones were fixed and then stained with 0.3% crystal violet. Then the clones were imaged and counted.
Computational docking analysis
In silico docking was performed using the Maestro 11.5 software program. The crystal structures of JAK2 (PBD: 3E63) and SRC (PBD: EKSW) were obtained from the Protein Data Bank (PDB) (https://www.rcsb.org/). The vortioxetine hydrobromide chemical structure (PubChem CID: 9966051) was obtained from PubChem (https://pubchem.ncbi.nlm.nih.gov/). All water molecules and small molecule ligands were deleted and hydrogen atoms were added. The PyMOL (PyMOL Molecular Graphics System, Version 2.3.4) program was utilized to prepare the vortioxetine hydrobromide for the docking study.
Western blotting
Cells (4.5 × 106) were plated on a 15 cm dish and treated with various concentrations of vortioxetine hydrobromide (0, 0.5, 1, 2 and 4 µM) for 24 h. Then cells were collected and lysed with RIPA buffer. The protein concentration was detected using the BCA kit (BCA Protein Assay Kit, Beyotime Biotechnology, Shanghai, China). Protein samples were heated with protein loading buffer at 100°C for 5 min and then were separated by SDS–PAGE and transferred to a PVDF membrane. The membrane was blocked with 5% nonfat milk for 1.5 h, incubated with primary antibodies overnight at 4°C. Next, the membrane was incubated with corresponding secondary antibodies for 1.5 h. Protein bindings were detected using a chemiluminescence reagent (ECL, Meilunbio).
Pull-down assay
Cell lysates (500 µg) or recombination proteins were incubated with vortioxetine hydrobromide-Sepharose 4 B beads or DMSO-Sepharose 4 B beads in reaction buffer at 4°C overnight. The beads were washed three times with buffer at 4 ℃. The proteins were eluted from the beads through boiling in loading buffer at 95°C for 5 min. Protein binding was assessed using Western blotting after elution.
Cellular thermal shift assay (CETSA)
Cells (4.5 × 106) were seeded into a 15 cm dish and treated with vortioxetine hydrobromide (0, 4 µM) for 24 h. Then they were harvested and resuspended in PBS. The cells were divided into 12 tubes equally. The control group and vortioxetine hydrobromide treatment group were heated at 37 ℃, 40 ℃, 43°C, 46°C, 49°C, 52°C, 55°C, 58°C, 61°C, 64°C, 67 ℃ or 70 ℃ for 3 min. Then the samples were quickly frozen twice in liquid nitrogen and centrifuged at 12000 rpm for 20 min at 4 ℃. The proteins were transferred to new tubes and then analyzed by Western blotting (17).
In vitro kinase assay
Active JAK2 (50 ng) or SRC (100 ng) recombination proteins were incubated with inactive STAT3 proteins (250 ng) for in vitro kinase assays separately. The reactions were run in kinase buffer and contained 100 µM ATP. Different doses of vortioxetine hydrobromide were added and the mixtures were incubated at 30°C for 30 min. The reactions were terminated by adding 5 µL protein loading buffer and boiling for 5 min at 95°C. The proteins were analyzed by using Western blotting.
Cell immunofluorescence assay
The slides were put in a 24-well plate, and then 2×104 GC cells were seeded in each well. After 16–18 h, cells were treated with various concentrations of vortioxetine hydrobromide for 24 h. The medium was then aspirated from the plate and the cells were fixed with 4% paraformaldehyde in PBS for 30 min. The cells were washed three times with PBS and incubated primary antibody (p-STAT3, STAT3 1:50) overnight at 4 ℃. Next, slides were incubated with the fluorescent secondary antibody (1:50) for 1.5-2 h in the dark. After several washes, slides were stained with DAPI (1:10000) for 5 min at 37 ℃. The images were captured and analyzed by using IN Cell Analyzer 6000 software.
Nuclear and cytoplasmic protein extraction
2 × 106 cells were seeded into a 10 cm dish and treated with different doses of vortioxetine hydrobromide (0, 0.5, 1, 2 and 4 µM) for 24 h. After harvesting the cells, the Nuclear and Cytoplasmic Protein Extraction kit (Cat#R0050, Solarbio) was used to extract nuclear proteins and cytoplasm proteins. The proteins were assessed by Western blotting.
CRISPR/Cas 9 knockout cell lines
To knockout the JAK2 or SRC gene in GC cells by using the CRISPR/Cas9 system, the lentiCRISPRv2 vector was used. Following the manufacturer’s suggested protocols, sgJAK2 or sgSRC plasmids were transfected into HEK293T cells by using Jet Primer (Thermo Fisher Scientific, Waltham, MA, USA). Two days after transfection, viral particles were harvested and filtered using a 0.22-µm filter. The GC cells were infected with 8 µg/mL polybrene and selected with 2 mg/mL puromycin for 72 h. Knockout efficiency was verified by Western blotting. The oligonucleotide sequences of JAK2 and SRC single guide (sg) RNA were designed in an online CRISPR tool (https://chopchop.cbu. uib.no/) and were listed as Table 1
Table 1 The oligonucleotide sequences of JAK2 and SRC single guide (sg) RNA
PDX mouse model
The study was approved by the Research Ethics Committee of Zhengzhou University. Five-to Six-week-old SCID/CB17 female mice were purchased from Beijing Vital River Laboratory Animal Technology (Beijing, China). The tissues were cut into pieces of 8–10 mm3 and inoculated under the skin of the mice using forceps. Mice were randomly divided into three groups of LSG85 (n = 8) and HSG288 (n = 9) as follows: (1) vehicle; (2) vortioxetine hydrobromide (1.5 mg/kg); (3) vortioxetine hydrobromide (12 mg/kg). Mice were given vortioxetine hydrobromide or vehicle by gavage every day. When the tumor volume reached 1000 mm3, the mice were anesthetized and tumor tissues were excised. Tumor volume was calculated as follows: tumor volume (mm3) = (length × width2)/2.
Immunohistochemical analysis
Formalin-fixed tumor tissues were paraffin embedded, cut into 4-µm sections and then placed on slides. The paraffin tissue sections were incubated at 65°C for 2 h, deparaffinized, rehydrated, and processed for antigen retrieval. Next, following by incubation with 3% H2O2 for 10 min to inactivate endogenous peroxidase, then the tissues were incubated overnight with the Ki67 and pY705-STAT3 primary antibody (1:50) at 4°C. The next day, all tissue sections were washed three times, and then incubated with the secondary antibody followed by 3, 3′-diaminobenzidine (DAB) staining. Then the sections were counterstained with hematoxylin, dehydration, and mounted with neutral resin. The Tissue Faxes (Tissue Gnostics) and Image Pro Plus software program (Media Cybernetics, Rockville, MD) were utilized to scan all sections and calculate positive cells.
Statistical analysis
The Statistical Product and Service Solutions (SPSS 21.0, IBM, Inc. Armonk, NY, USA.) was used to calculate P values. The significance of differences was calculated by one-way ANOVA and data were expressed as the mean values ± SD. p < 0.05 was considered statistically significant.