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Research article
Parviz Parvizi
Pasteur Institute of Iran
Corresponding Author
ORCiD: https://orcid.org/0000-0002-5984-7287
License:
This work is licensed under a CC BY 4.0 License. Read Full License
Background
Main approaches of this investigation were climate regionalization to recognize the spatial distribution of cutaneous/visceral leishmaniasis (CL/VL) vectors as risk-maps using ArcGIS modeling system, evaluation of species biodiversity, assessing bio-climate (BC) effect on expression plasticity of genes possessing vaccine properties isolated from wild-collected sand flies.
Methods
The Inverse Distance Weighting (IDW) interpolation method was used to obtain accurate geography map using ArcGIS10.3.1 in closely-related distances. Species diversity was calculated based on Shannon diversity index using Rv.3.5.3. Expression fold change of SP15 and LeIF genes was evaluated using cDNA synthesis and RT-qPCR analysis.
Results
Three BC zone were identified in northeast of Iran. Phlebotomus papatasi were abundantly captured in all BC regions and the frequency was more in plains areas of mountainous BC as hot spots of CL. VL vectors were more prevalent in spatial cluster of Mediterranean BC. Semi-arid BC was identified as a major contributing factor to up-regulate SP15 salivary gene expression ( P =0.0050, P <0.05), and Mediterranean BC had considerable effect on up-regulation of LeIF- Leishmania gene in gravid and semi-gravid P. papatasi population ( P =0.0109, P <0.05).
Conclusions
The diversity and spatial distribution of CL/VL vectors associated with BC regionalization obtained in our research provide epidemiological risk maps and establish more effectively control measures against leishmaniasis. Oscillations in gene expression indicate that each gene has its own features, which are profoundly affected by bioclimatic characteristics and physiological status of sand flies. It is essential to consider BC factors affecting regulatory regions of environmentally responsive loci for genes used in vaccine designing.
Keywords
CL and VL vectors, immunogenic proteins, spatial distribution, GIS modeling, biodiversity, SP15 and LeIF genes expression, bioclimatic regionalization
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CURRENT STATUS: Under Review
Version 1
Posted 12 Apr, 2020
No community comments so far
Editorial decision: Major revision
On 25 Feb, 2021
Review #2 received
Received 21 Feb, 2021
Reviewer #2 agreed
On 15 Feb, 2021
Review #1 received
Received 10 May, 2020
Reviewers invited
Invitations sent on 23 Apr, 2020
Reviewer #1 agreed
On 23 Apr, 2020
Editor assigned
On 13 Apr, 2020
Submission checks complete
On 08 Apr, 2020
Editor invited
On 08 Apr, 2020
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Subject Areas
Infectious Diseases
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This preprint is under consideration at BMC Infectious Diseases. A preprint is a preliminary version of a manuscript that has not completed peer review at a journal. Research Square does not conduct peer review prior to posting preprints. The posting of a preprint on this server should not be interpreted as an endorsement of its validity or suitability for dissemination as established information or for guiding clinical practice.
Learn more about In Review
Research article
Parviz Parvizi
Pasteur Institute of Iran
Corresponding Author
ORCiD: https://orcid.org/0000-0002-5984-7287
Badges
Prescreen
This manuscript passed our Prescreen assessment
Complete author information
Appropriate declaration statements
Potential risks to human health
Prescreen
Peer Review Timeline
CURRENT STATUS: Under Review
Version 1
Posted 12 Apr, 2020
No community comments so far
Editorial decision: Major revision
On 25 Feb, 2021
Review #2 received
Received 21 Feb, 2021
Reviewer #2 agreed
On 15 Feb, 2021
Review #1 received
Received 10 May, 2020
Reviewers invited
Invitations sent on 23 Apr, 2020
Reviewer #1 agreed
On 23 Apr, 2020
Editor assigned
On 13 Apr, 2020
Submission checks complete
On 08 Apr, 2020
Editor invited
On 08 Apr, 2020
Metrics
Comments: 0
PDF Downloads: ...
HTML Views: ...
Subject Areas
Infectious Diseases
License:
This work is licensed under a CC BY 4.0 License. Read Full License
Background
Main approaches of this investigation were climate regionalization to recognize the spatial distribution of cutaneous/visceral leishmaniasis (CL/VL) vectors as risk-maps using ArcGIS modeling system, evaluation of species biodiversity, assessing bio-climate (BC) effect on expression plasticity of genes possessing vaccine properties isolated from wild-collected sand flies.
Methods
The Inverse Distance Weighting (IDW) interpolation method was used to obtain accurate geography map using ArcGIS10.3.1 in closely-related distances. Species diversity was calculated based on Shannon diversity index using Rv.3.5.3. Expression fold change of SP15 and LeIF genes was evaluated using cDNA synthesis and RT-qPCR analysis.
Results
Three BC zone were identified in northeast of Iran. Phlebotomus papatasi were abundantly captured in all BC regions and the frequency was more in plains areas of mountainous BC as hot spots of CL. VL vectors were more prevalent in spatial cluster of Mediterranean BC. Semi-arid BC was identified as a major contributing factor to up-regulate SP15 salivary gene expression ( P =0.0050, P <0.05), and Mediterranean BC had considerable effect on up-regulation of LeIF- Leishmania gene in gravid and semi-gravid P. papatasi population ( P =0.0109, P <0.05).
Conclusions
The diversity and spatial distribution of CL/VL vectors associated with BC regionalization obtained in our research provide epidemiological risk maps and establish more effectively control measures against leishmaniasis. Oscillations in gene expression indicate that each gene has its own features, which are profoundly affected by bioclimatic characteristics and physiological status of sand flies. It is essential to consider BC factors affecting regulatory regions of environmentally responsive loci for genes used in vaccine designing.
Figure 1
Figure 2
Figure 3
Figure 4
Figure 5
Figure 6
Figure 7
Figure 8
Figure 9
Figure 10
Figure 11
Figure 12
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