The study demographic data (as shown in Table 1) of the 37 patients showed that most patients were males presenting 62.2% while females 37.8%. The age was 55.73 ± 14.86 (mean ± SD) years. Also, 48.6% of them had a smoking history, 51.4% were diabetic and 75.7% were immunocompromised. Ten (27%) patients were mechanically ventilated and the APACHE II score was 13.49 ± 11.83 (mean ± SD). Furthermore, 24.3% of the patients died while 76.7% are discharged.
The fungal cultures obtained from the patients showed no growth in 18 samples (48.6%), and positive in 19 samples (51.4%) in which C. Albicans was found in 16.2%, Aspergillus spp. was found in 10.8%, Mucormycosis in 13.5%, mixed C. Albicans and Aspergillus spp. in 5.4%, C. Glabrata in 2.7% and C. kruzei in 2.7%. (Fig. 3)
Our study was in accordance with the study of Ahmed et al in which 66.67% of the participants associated with respiratory problems had fungal culture positive while 33.33% were negative. The species were Candida in 57.5%, and Aspergillus in 42.5% of the cases. C. Albicans occurred in 23.33%, Aspergillus non-fumigatus in 18.33%, C. non-Albicans in 15% and Aspergillus fumigatus in 10% of the participants. (13)
The most frequently encountered fungi were Aspergillus species (57%), followed by Cryptococcus species (21%) and Candida species (14%). There were 72 patients with an acute invasive fungal infection, with a mortality rate of 67%. (14)
The study by Biswas et al. was done on 60 patients with pulmonary diseases and it showed positive fungal culture was found in 28 patients (46.7%) that showed Aspergillus sp. in 13 patients (including A. flavus in 6 patients, A. fumigatus in 4 patients and A. niger in 3 patients) and Candida sp. in 14 (C. Albicans and C. Tropicalis being isolated from 12 and 2 patients respectively). One sample showed Cryptococcus neoformans growth in a patient with chronic interstitial lung disease. (15)
In the current study, patients with positive fungal culture were diabetic in 57.9% (11/19), immunocompromised in 78.9% (15/19), and mechanically ventilated in 44% (8/19).
This agreed with the study of Ahmed et al, in which positive fungal cultures were found more with DM (11 out of 16 diabetic patients) and there was a significant association of DM with Candida infection (P = 0.03), while the other comorbidities including cardiovascular, liver, renal diseases, and malignancies showed insignificant association with either Candida or Aspergillus infection. (13)
In the study of Biswas et al.; it was found that diabetes mellitus (DM) was the commonest risk factor associated with Candida albicans (71.4% of patients). However, there was no significant association between positive culture and any risk factor. (15)
There were insignificant statistical differences between negative and positive fungal cultures regarding all demographic, clinical, laboratory, and radiological data except for mechanical ventilation and APACHE II score (p = 0.029 and 0.040 respectively) (Tables 3 & 4).
Fraser et al. (16) reported that mechanical ventilation is a significant risk factor for invasive fungal infection. Furthermore, there was a significant statistical difference (P = 0.001) between sputum fungal culture results regarding the duration of invasive mechanical ventilation. This result was compatible with another study by Alp et al. (17) which showed that longer mechanical ventilation may increase the risk of infection
Chakraborti et al. studied people in a tertiary care hospital's respiratory ICU for about a year. All of the patients had been on mechanical ventilation for more than 7 days. On day 1 and day 7, blood, urine, and endotracheal aspirate samples from these patients were sent to a lab for fungal culture. They found that having mechanical ventilation for more than 7 days was strongly linked to the growth of fungi in the respiratory and urinary tracts. With practises for preventing infections, the colonization of fungi can be reduced by giving the right preventive antifungals. (1)
In a systemic review done to study the risk factors for invasive fungal infection, it was found that mechanical ventilation, DM, APACHE II or III scores, surgery, total parenteral nutrition, fungal colonization, renal replacement therapy, sepsis, and infection are risk factors that were found to be associated significantly with invasive fungal diseases. (18)
There were significant differences between the presence and absence of mucormycosis growth regards the presence of bilateral lung consolidation with lung cavitations in CT, APACHE II score, and the fate of the patients. Furthermore, all cases in our study with bilateral lung consolidations with cavitations were positive for mucormycosis (Fig. 2).
Even though Mucormycosis is rare, it is becoming more common in patients with uncontrolled diabetes, weakened immune systems, or open wounds that have been contaminated by Mucorales. Most of these patients are diagnosed in the intensive care unit (ICU). Necrotizing lesions that spread quickly in the nose, skin, and soft tissues, as well as the lungs, are a sign of the disease. (19)
The usual radiographic findings of pulmonary mucormycosis include infiltration, consolidation, nodules, cavitations, atelectasis, effusion, and hilar or mediastinal lymphadenopathy. Computed tomography scan results of multiple lung nodules (≥ 10), pleural effusion, and reversed halo signs are found to be better predictors of pulmonary mucormycosis than invasive aspergillosis in patients with hematological malignancy. (20)
Hammer et al, studied the CT features in pulmonary mucormycosis, where cavitations in 3 out of 30 patients on initial imaging and with subsequent CT studies, increased to 37% (11 out of 30 patients), and the reverse halo sign was seen in 7 of these 11 patients. Also, the initial CT finding in 2 patients (7%), was extensive bilateral consolidations like that of multifocal bacterial pneumonia then additional 3 patients developed multifocal pneumonia on subsequent CT studies for a total of 5 patients (17%). (21)
In this current study, 4 patients with Mucormycosis positive samples died out of the 5 patients, this was similar to multiple previous studies that indicated that mucormycosis is associated with high mortality. (21–24)
Chakrabarti et al reported that Mucorales were detected in 14.4% of participants and Aspergillus spp. were the commonest isolates (82.1%), A high APACHE II score and mucormycosis infection were significant mortality predictors. (25)
In this current study, the antifungal agent susceptibility for the isolated fungi was done. (Figs. 3 & 4) The most susceptibility was for caspofungin and amphotericin B while the most resistance was for ketoconazole and voriconazole.
Sani et al studied the antifungal susceptibly against isolated fungi using 3 agents voriconazole, nystatin, and fluconazole. The 3 fungal isolated species Penicillium citrinum, Mucor spp., and Aspergillus flavus are more susceptible to voriconazole while C. albicans was more susceptible to Nystatin. While fluconazole showed the lowest antifungal activity and most isolated fungi were resistant to fluconazole. (26)
Balajee et al. reported the presence of a poorly sporulating variant of Aspergillus fumigatus which was associated with lower susceptibilities to multiple antifungals, including itraconazole. And Amphotericin B but voriconazole had potent in-vitro activity against these isolates. (27)
There are some limitations of this current study. The participants were small in number which needs to be increased in future research. Also, the duration of the study was short. Further studies are needed to investigate the relationship between species that have antifungal drug resistance with risk factors and the clinical outcome.