Genotype ARC(%) Controls(%) p value OR(95% CI)
Allel (n=583) (n=511)
SNPs
rs368680155 TT 547(93.88%) 473(92.63%) 0.407 1.221(0.761-1.957)
(MYBPC1) TC 21(3.54%) 22(4.26%) 0.550 0.831(0.451-1.529)
CC 15(2.58%) 16(3.11%) 0.579 0.817(0.400-1.670)
T 1115(96%) 968 (94.7%) 0.321 1.220(0.824-1.805)
C 51(4.4%) 54 (5.3%) 0.321 0.820(0.554-1.214)
rs3817552
(MYBPC1) CC 382 (65.56%)337 (66.0%) 0.882 0.981(0.764-1.260)
CG 165 (28.33% 133(26.00%) 0.399 1.122(0.859-1.466)
GG 36 (6.11%) 41 (8.00%) 0.233 0.754(0.474-1.200)
C 929 (80%) 807 (80%) 0.682 1.044(0.849-1.285)
G 23 (20%) 215 (20%) 0.682 0.958(0.778-1.178)
rs2293468 CC 288 (49.44%) 255 (50.00%)0.868 0.980(0.773-1.243)
(MYBPC1) CT 204 (35.00%) 123 (24.00%)0.000 1.698(1.303-2.213)
TT 91 (15.56%) 133 (26.00%)0.000 0.526(0.390-0.708)
C 780 (67%) 633 (62%) 0.016 1.242(1.042-1.480)
T 386 (33%) 389 (38%) 0.016 0.805(0.676-0.960)
rs2291284 TT 288 (49.44%) 255 (50.00%) 0.868 0.980(0.773-1.243)
(NOL11) TC 75 (12.78%) 72 (14.00% 0.553 0.9(0.636-1.274)
CC 220 (37.78%) 184 (36.00% 0.555 1.077(0.842-1.378)
T 651 (56%) 582 (57%) 0.6 0.956(0.807-1.132)
C 515 (44%) 440 (43%) 0.6 1.046(0.883-1.240)
rs12602590 CC 324 (955.56%) 358 (70%) 0.000 0.535(0.416-0.687)
(GAS2L2) CT 230 (39.44%) 137 (26.78%) 0.000 1.799(1.391-2.326)
TT 29 (5.00%) 16 (3.22%) 0.126 1.619(0.869-3.017)
C 878 (75%) 853 (83%) 0.000 0.694(0.489-0.747)
T 288 (25%) 169 (17%) 0.000 1.656(1.339-2.047)
rs78557458 CC 548(94.00%) 502(98.18%) 0.000 0.281(0.134-0.590)
(GAS2L2) CA 13 (2.18%) 6 (1.26%) 0.182 1.920(0.724-5.088)
AA 22 (3.82%) 3 (0.56%) 0.000 6.641(1.976-22.319)
C 1109(95%) 1010 (99%) 0.000 0.231(0.123-0.433)
A 57 (5%) 12 (1%) 0.000 4.326(2.308-8.109)
rs569956 TT 379(65.00%) 368 (72.00%) 0.013 0.722(0.558-0.934)
(RGS8 ) GT 23 (3.89%) 20 (4.00%) 0.979 1.008(0.547-1.8585)
GG 18 (31.11%) 123 (24.00%) 0.01 1.420(1.086-1.857)
T 781 (67%) 756 (74%) 0.000 0.714(0.593-0.859)
G 385 (33%) 266 (26%) 0.000 1.401(1.164-1.687)
rs3735328 CC 268 (46.00%) 290 (56.67%) 0.000 0.648(0.510-0.823)
ZNF862 CT 257 (44.00%) 176 (34.44%) 0.000 2.164(1.677-2.794)
TT 58 (10.00%) 45 (8.89%) 0.519 1.144(0.760-1.722)
C 793 (68%) 756 (74%) 0.002 0.748(0.621-0.901)
T 373 (32%) 266 (26%) 0.002 1.337(1.110-1.610)
rs62621204 CC 489(83.89%) 501 (98.00%) 0.000 0.104 (0.053-0.202)
ZNF862 CT 71(12.19%) 7 (1.44%) 0.000 9.984 (4.549-21.915)
TT 23 (3.92%) 3 (0.56%) 0.000 6.955 (2.076-23.302)
C 1049 (90%) 1009(99%) 0.000 0.116 (0.065-0.206)
T 117 (10%) 13(1%) 0.000 8.657 (4.849-15.453)
rs1332500 GG 424 (72.78%) 378 (74.00%) 0.642 0.938 (0.717-1.228)
C1orf68 GA 140 (23.96%) 102 (20.00%) 0.107 1.267 (0.950-1.691)
AA 19 (3.26%) 31 (6.00%) 0.027 0.522 (0.291-0.935)
G 988 (85%) 858 (84%) 0.616 1.061 (0.842-1.337)
A 178 (15%) 164 (16%) 0.616 0.943 (0.748-1.188)
rs3095726 TT 163 (28%) 204 (40%) 0.000 0.584(0.453-0.752)
ZNF573 TC 303 (52%) 233 (45.56%) 0.035 1.291(1.018-1.638)
CC 117 (20%) 74 (14.44%) 0.015 1.483(1.078-2.040)
T 629 (54%) 641 (63%) 0.000 0.696(0.587-0.826)
C 537 (46%) 381 (37%) 0.000 1.436(1.210-1.705)
rs9975588 GG 473 (81.11%)440 (86.00%) 0.027 0.694(0.501-0.961)
MCM3AP GA 107 (18.33%) 61 (12.00%) 0.003 1.658(1.181-2.329)
AA 3 (0.56%) 10 (2.00%) 0.028 0.259(0.071-0.947)
G 1053 ( 90%) 941 (92%) 1.147 0.802(0.595-1.081)
A 113 (10%) 81 (8%) 1.147 1.247(0.925-1.680)
rs2839166 TT 457 (78.33%)409 ( 80.00%) 0.502 0.905(0.675-1.213)
MCM3AP TC 123 (21.11%) 92 (18.00%) 0.199 1.218(0.901-1.645)
CC 3 (0.56%) 10 (2.00%) 0.028 0.259(0.071-0.947)
T 1037 (89%) 910(89%) 0.938 0.989(0.757-1.294)
CC 129 (11%) 112 (11%) 0.938 1.011(0.773-1.322)
rs2305243 TT 375(64.44%) 317(62.00%) 0.434 1.103(0.863-1.411)
ATL2 TA 185(31.67%) 163(32.00) 0.953 0.992(0.769-1.281)
AA 23 (3.89%) 31( 6.00%) 0.106 0.636(0.366-1.106)
T 935 (80%) 797 (78%) 0.205 1.143(0.930-1.405)
A 231 (20%) 225( 22%) 0.205 0.875(0.712-1.076)
rs1555804 AA 453 (77.70%) 389 (76.00%) 0.537 1.093(0.825-1.449))
MSRB2 AG 120 (20.58%) 102 (20.00%) 0.798 1.039(0.773-1.397))
GG 10 (1.72%) 20 (4.00%) 0.026 0.428(0.199-0.924)
A 1026 (88%) 880 (86%) 0.189 1.183(0.921-1.519))
G 140 (12%) 142 (14%) 0.189 0.846(0.658-1.086)
Indels
rs139095003 CTCCTCCT>CTCCT
FLII CTC/CTC 545(93.57%) 471(92.2%) 0.401 1.218(0.768-1.931)
CTC/DEL 13 (2.22%) 22(4.24%) 0.052 0.507(0.253-1.017)
DEL/DEL 25 (4.21%) 18(3.56%) 0.516 1.227(0.662-2.276)
CTC 1103 (95%) 964 (94%) 0.781 1.053(0.730-1.520)
DEL 63 (5%) 58 (6%) 0.781 0.949(0.658-1.370)
rs3835153 GAG>G
DHDH GA/GA 487 (83.55%) 455 (89.18%) 0.009 0.624(0.438-0/889)
GA/ DEL 52 (8.89%) 31 (6.00%) 0.075 1.516(0.956-2.406)
DEL/DEL 44 (7.56%) 25 (4.82%) 0.072 1.587(0.957-2.632)
GA 1026 (88%) 941 (92%) 0.002 0.631(0.473-0.841)
DEL 140 (12%) 81 (8%) 0.002 1.585(1.189-2.113)
rs76499929 AGAAGA>AGA
SYNE3 AGA /AGA 299 (52.00%)295(57.78%) 0.033 0.771(0.607-0.979)
AGA /DEL 233 (40.00%)196(38.33%) 0.586 1.070(0.839-1.365)
DEL/DEL 51 (8.00%) 20(3.89%) 0.001 2.353(1.383-4.004)
AGA 831 (71%) 786(77%) 0.003 0.745(0.614-0.903)
DEL 335 (29%) 236(23%) 0.003 1.343(1.107-1.628)
rs141384720 AGGAG>AG
SYNE3
AGGAG/ AGGAG 385(66.11%)317(62.00%) 0.157 1.196(0.934-1.532)
AGGAG/DEL 178(30.56%)184(36.00%) 0.057 0.783 (0.608-1.008)
DEL/DEL 19 (3.33%) 10(2.00%) 0.180 1.691 (0.779-3.670)
AGGAG 948 (81%) 818(80%) 0.406 1.095 (0.885-1.354)
DEL 216 (19%) 204 (20%) 0.406 0.914(0.738-1.130)
rs141384720 AGGAG>AG
AMBN
AGG/ AGG 386 (66.11%) 317 (62.00%) 0.151 1.199(0.936-1.536)
AGG/ DEL 178 (30.56%) 184 (36.00%) 0.055 0.781(0.607-1.005)
DEL/ DEL 19 (3.33%) 10 (2.00%) 0.181 1.688(0.777-3.664)
AGG 950 (81%) 818 (80% ) 0.395 1.097(0.886-1.357))
DEL 216 (19%) 204 (20% ) 0.395 0.912(0.737-1.128)
rs200420244 T>-
ZNF527
T/T 528(90.56%) 473(92.5%) 0.237 0.771(0.501-1.188)
T/Null 33 (5.58%) 22(4.38%) 0.306 1.334(0.767-2.319)
Null /Null 22 (3.86%) 16 (3.12%) 0.563 1.213(0.630-2.336)
T 1089 (93% ) 968 (95%) 1.194 0.789(0.551-1.129)
Null 77 (7%) 54 (5%) 1.194 1.267(0.886-1.814)
rs199964596 CAACAACAAC>CAACAAC
GPSM2
CAA/ CAA 523 (89.66%)449 (87.88%) 0.334 1.204(0.826-1.754)
CAA/ DEL 16 (2.78%) 31 (6.00%) 0.007 0.437(0.236-0.809)
DEL/ DEL 44 (7.56%) 31 ( 6.12%) 0.334 1.264(0.785-2.034)
CAA 1062(91%) 929(91%) 0.883 1.022(0.762-1.371)
DEL 104(9%) 93 (9%) 0.883 0.978(0.730-1.312)
rs113082690 ACAGACA>ACA
ABCA10
ACAG / ACAG 473(81.11%) 457(89.44%) 0.000 0.508(0.358-0.721)
ACAG /DEL 104(17.78%) 51(10.00%) 0.000 1.958(1.368-2.803)
DEL /DEL 6 (1.11%) 3(0.56) 0.419 1.761(0.438-7.077)
ACAG 1050(90%) 965(94%) 0.000 0.535(0.385-0.743)
DEL 116(10%) 57 (6) 0.000 1.870(1.346-2.599)
rs372662724 CTCT>CT
ZNF107
CT/ CT 523(89.66%) 462(90.44%) 0.699 0.924(0.621-1.376))
CT/ DEL 38(6.56%) 28(5.45%) 0.472 1.203(0.727-1.990))
DEL/ DEL 22(3.78%) 21(4.11%) 0.775 0.915(0.497-1.684)
CT 1084(93%) 952(93%) 0.866 1.972 (0.698-1.353)
DEL 82 (7%) 70 (7%) 0.866 1.029 (0.739-1.432)
rs71713548 AGATAGA >AGA
MYCT1
AGAT/ AGAT 376 (64.44%) 358 (70.00%) 0.051 0.776(0.602-1.001
AGAT/ DEL 188(32.22%) 143 (28.00%) 0.126 1.225(0.945-1.588)
DEL/ DEL 19(3.33%) 10 (2.00%) 0.181 1.688(0.777-3.664)
AGAT 940(81%) 859 (84%) 0.036 0.789(0.632-0.985)
DEL 226(19%) 163 (16%) 0.036 1.267(1.015-1.518)
rs11368509 ->A
UPP2
A/ A 450 (77.22%) 426 (83.44%) 0.011 0.675(0.499-0.914)
A/ DEL 126 ( 21.67%) 72 (14.00%) 0.001 1.681(1.223-2.310)
DEL/ DEL 7 (1.11%) 13 (2.56%) 0.098 0.466(0.184-1.176)
A 1026(88%) 924 (90%) 0.070 0.777(0.592-1.021)
DEL 140 (12%) 98 (10%) 0.070 1.287(0.979-1.690)
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