Reagents
Primary antibodies against β-actin, PCNA, and GAPDH and secondary antibodies (goat anti-rabbit) were purchased from Proteintech (Wuhan, China). Primary antibodies against ERK1/2, p-ERK1/2, and NCAM1 were obtained from Cell Signaling Technology (CST, Massachusetts, USA). Primary antibodies against α-SMA were purchased from BOSTER (Wuhan, China). NCAM1 ELISA kits for rats and humans were purchased from Jiangsu Meibiao Biotechnology Co., Ltd (Yancheng, China). Recombinant rat PDGF-BB was purchased from R&D Systems (State of California, USA). The Cell Counting Kit-8 (CCK-8) was purchased from APExBIO (Houston, USA). BeyoClick™ EdU Cell Proliferation Kit with Alexa Fluor 555 was from Beyotime Institute of Biotechnology (Shanghai, China). TBHQ and recombinant rat NCAM1 protein were purchased from MedChem Express (New Jersey, USA).
Study population
The clinical study was approved by the Ethics Committee of The First Affiliated Hospital of Chongqing Medical University. All the participants signed informed consent. A total of 39 subjects including 21 healthy controls and 18 patients with idiopathic pulmonary hypertension were included. PAH was diagnosed according to the following criteria: mPAP ≥ 25 mmHg, PAWP ≤ 15 mmHg, and PVR ≥ 3 Wood units measured at rest and at sea level by right heart catheterization (RHC). Clinical samples were collected at the First Affiliated Hospital of Chongqing Medical University from September 2017 to April 2018. The collected blood samples were centrifuged (3000 rpm, 10 min) to obtain plasma. The collected plasma was then stored at − 80°C for subsequent experiments.
Enzyme-linked immunosorbent assay
The levels of NCAM1 protein in the plasma samples were detected by an ELISA kit (Ruixin Biotech, Quanzhou, China). First, the blank control wells, standard wells, and sample wells were set according to the instructions. Then, 100 µL of HRP-conjugated reagent was added to each well, except for the blank wells. The reaction plates were incubated for 60 min at 37°C and then washed five times. After washing, 100 µL of substrate mixture was added to each well and incubated at room temperature for 15 min in the dark. After adding 50 µL of stop solution to each well, the absorbance of each well was measured at a wavelength of 450 nm by zeroing the blank well.
Microarray data acquisition
The GSE15197 microarray dataset was downloaded from a public database called the Gene Expression Omnibus (GEO) database (https://www.ncbi.nlm.nih.gov/geo/). This dataset included lung tissue samples from 18 subjects with pulmonary hypertension and 13 normal controls.
Data processing and DEG determining
The easylabel package in R (version 4.1.0) software was used to screen differentially expressed genes (DEGs) between controls and patients with PAH. A p < 0.05 was considered statistically significant. The DEGs obtained were used to draw the volcano map using the easylabel package.
Animal experiments
Male Sprague-Dawley rats (180–200 g) were purchased from the Experimental Animal Center of Chongqing Medical University (Chongqing, China). All rat experiments were conducted in accordance with the Guide for the Care and Use of Laboratory Animals and were approved by the Ethics Committee of Chongqing Medical University. Rats in the monocrotaline (MCT) group were intraperitoneally injected with MCT (50 mg/Kg, Mengbio, Chongqing, China), while rats in the control group were injected with the same volume of saline.
Echocardiography
After anesthesia, the rats were fixed in the supine position, and the fur on the anterior chest was removed. The right heart structure and function of the rats were examined by echocardiography using an ultrasound system. The right atrium transverse diameter (RATD) and right ventricle transverse diameter (RVTD) were measured in the four-chamber section of the heart under two-dimensional ultrasound mode, and then the tricuspid annular plane systolic excursion (TAPSE) was measured in the four-chamber section of the heart under M-mode ultrasound mode.
Right heart catheterization (RHC)
After anesthesia, the rats were fixed on the operating table, and the right neck fur was removed before surgically exposing the right external jugular vein. Finally, the catheter was filled with heparin saline, and the connected multi-lead physiological recorder (MP150, BIOPAC System, USA) was inserted into the right atrium through the external jugular vein. It was passed through the right ventricle to the pulmonary artery based on the waveform. The pressure was recorded.
Hematoxylin-eosin (H&E) staining
The rat lung tissue was immersed in 4% paraformaldehyde and fixed overnight. It was then dehydrated, cleared, embedded in paraffin, and cut into 5 µm thick paraffin sections. H&E staining was performed on lung tissue paraffin sections. Images of distal pulmonary arterioles were acquired with a microscope (Leica Microsystems DFC550, Germany).
Immunofluorescent staining
Paraffin sections of rat lung tissue were dewaxed with gradient alcohol and then the antigen was retrieved with EDTA antigen repair fluid. After blocking with 3% BSA for 30 min, sections were incubated overnight with rabbit anti-NCAM1 and mouse anti-α-SMA. The sections were incubated with the corresponding secondary fluorescently-labeled antibody for 50 min before the nuclei were stained with 4’,6-diamidino-2-phenylindole (DAPI). Finally, the images were acquired using a fluorescence microscope (Leica Microsystems DFC550, Germany).
Preparation of PASMCs
Primary PASMCs were isolated from Sprague-Dawley rats (6–8 weeks, 180–200 g) as previously described 9. Briefly, rat lung tissues were rapidly isolated after the rats were sacrificed. The pulmonary artery tissues were quickly isolated, and the surrounding connective tissue was carefully removed. Pulmonary artery tissues were then minced into pieces, evenly dispersed in Petri dishes, transferred to a culture dish with Dulbecco’s modified Eagle’s medium/nutrient mixture F-12 (DMEM/F-12) containing 20% fetal bovine serum (FBS) and 1% penicillin and streptomycin, and incubated in a humidified incubator at 37°C with 5% CO2 and 21% O2. Cells were cultured for 3–8 passages for subsequent experiments.
Quantitative reverse transcription PCR (qRT-PCR)
Trizol reagent (TaKaRa, Japan) was used to extract total RNA from rat lung tissues and PASMCs. Then, cDNA was obtained from the total RNA by reverse transcription using the M5 super plus qPCR RT kit with gDNA remover (Mei5 Biotech, Beijing, China). Real-time quantitative PCR was conducted using TSINGKE TSE202-2×T5 Fast qPCR Mix (Tsingke, Chongqing, China) on an ABI7500 quantitative PCR instrument. The sequences of primers were as follows: NCAM1, forward 5’-AGC CAA GGA GAA ATC AGC GT-3’, reverse 5’-GCG TTG TAG ATG GTG AGG GT-3’; β-actin, forward 5’-AGA TCA AGA TCA TTG CTC CT-3’, reverse 5’-ACG CAG CT CAG TAA CAG TCC-3’. The relative mRNA expression was calculated by the 2−△△Ct method, and β-actin was used as the internal control.
Western blotting
The protein samples were separated on 10% gels and then transferred to PVDF membranes (Bio-Rad Laboratories, California, USA). The membranes were blocked in 5% non-fat milk for 1.5 h at room temperature and incubated with the primary antibodies [β-actin (1:5000), GAPDH (1:10000), ERK-1/2 (1:1000), p-ERK-1/2 (1:1000), PCNA (1:2000), NCAM1 (1:1000)] overnight at 4°C. The membranes were incubated with secondary antibodies (1:5000) for another 1.5 h at room temperature. Immunoreactive bands were visualized using an enhanced ECL kit.
Cell transfection
For the knockdown of NCAM1, we transfected cells with the following sequence of siRNA for NCAM1: sense 5′-GGU UCA UAG UCC UAU CCA ATT-3′ and antisense 5′-UUG GAU AGG ACU AUG AAC CTT-3′. The siRNA was transfected into PASMCs using Lipofectamine™3000 (Invitrogen) according to the manufacturer’s protocol once the cells had reached 30–40% confluence. The transfection efficiency was detected by western blot.
EdU staining
The proliferation of PASMCs was detected using a BeyoClick™ EdU-555 Cell Proliferation Kit. The treated PASMCs were cultured with 10 µmol/L EdU for 2 h. After EdU labeling, the culture medium was removed and the cells were fixed with 4% paraformaldehyde for 15 minutes at room temperature. After washing the cells with PBS three times, cells were permeabilized with enhanced immunostaining permeabilization buffer for 15 min at room temperature. After washing the cells three times, the cells were incubated with click additive solution at room temperature for 30 minutes in the dark. PASMC nuclei were stained with Hoechst-33342. Finally, cells were photographed under a fluorescence microscope.
Cell viability assay
PASMCs (5 × 103 cells/well) were seeded in 96-well plates, cultured for 24 h, and then treated differently according to the grouping arrangement. Ten microliters Cell Counting Kit-8 was added to the treated cells. Then, the absorbance was measured at a wavelength of 450 nm with a microplate reader.
Scratch wound healing assay
PASMCs were seeded into a 6-well plate and cultured until 80% confluence before processing for the first step. Cells were wounded using a 1000 µL pipette tip and then treated differently according to the grouping arrangement. Wound closures were observed and photographed at 0 h and 24 h with a microscope (Leica Microsystems DFC550, Germany).
Transwell migration assay
Using a Transwell chamber with 8-µm pore size to test PASMCs migration. The PASMCs (1 × 104) were seeded in the upper chamber and cultured in a serum-free medium, while complete medium containing 10% serum was added to the lower chamber. PASMCs were fixed with 4% paraformaldehyde before staining with 1% crystal violet. Finally, the migrating cells on the lower side of the membrane were photographed.
Statistical analysis
Statistical results of all experiments are presented as the mean ± standard error (SD). GraphPad 9.0 software was used for statistical analysis. The t-test was used to compare the mean values between two groups, and one-way ANOVA was used to analyze the mean values of three or more groups. A p-value < 0.05 was considered statistically significant.