Animals and treatments
Twenty-eight male C57BL/6J mice (6 weeks old) were purchased from Shanghai Laboratory Animal Centre and housed in six cages (4–5 mice/cage) in a controlled environment (temperature: 21 ± 1°C; relative humidity: 50 ± 10%) with regular 12-h light-dark cycles. After a 2-week adaptation period with ad libitum access to a normal mouse diet and water, the mice (8 weeks old) were randomly divided into control (CON; n = 8), CIH (n = 10) and CIH + melatonin (CIH + MT; n = 10) groups (Fig. 1A).
The CIH intervention was performed in identical chambers (Oxycycler model A84; BioSpherix, Parish, NY, USA) for 8 h/day (8:00 a.m. to 4:00 p.m.) over 10 consecutive weeks. The O2 concentration inside the chamber was continuously measured using an O2 analyser. Hypoxia was induced with 8–10% O2 for 240 s, followed by 21% O2 for 120 s, as described previously.31 In the CON group, 8–10% O2 (hypoxia) was replaced with 21% O2 (air), whereas the other conditions followed those for the CIH groups. Melatonin (M5250; Sigma-Aldrich, St. Louis, MO, USA) was dissolved in absolute ethanol and diluted in sterile water to the final concentration in light-resistant bottles32 according to the weight and average water consumption of the mice (Fig. 2B, F). The CIH group received 0 mg/kg (vehicle) of melatonin, while the CIH + MT group received 30 mg/kg of melatonin. After the experiment ended and following an overnight fast, all mice were euthanized with an overdose of 1% sodium pentobarbital (100 mg/kg, intraperitoneally). This animal study protocol was approved by the Institutional Animal Care and Use Committee of Shanghai Jiao Tong University Affiliated Sixth People's Hospital. All animal experiments were conducted following the Guide for the Care and Use of Laboratory Animals, published by the Animal Welfare Committee of the Agricultural Research Organization.
Cell culture and treatments
The Caco-2 human colon cancer cell line was obtained from the American Type Culture Collection (ATCC, Manassas, VA, USA) and cultured in high-glucose Dulbecco’s modified Eagle’s medium supplemented with 10% foetal bovine serum (FBS), 1% antibiotics (100 U/mL of penicillin and 100 mg/mL of streptomycin) and 1% nonessential amino acids at 37°C in 5% CO2. The culture medium was replaced every 2 days. The Caco-2 cells were randomly divided into five groups: CON, CIH, CIH + MT, CIH + Janus-activated kinase-2 (JAK2)/signal transducer and activator of transcription3 (STAT3) inhibitor, and CIH + MT + STAT3 activator. CIH was induced in identical cell culture chambers (Oxycycler model C42; BioSpherix) for 48 h. As described previously 33, hypoxia was induced with 0.5–1% O2 for 30 min followed by 21% O2 for 30 min. To further confirm the roles of melatonin and JAK2/STAT3 signalling in Caco-2 cells exposed to CIH, melatonin (20 ng/mL), the JAK2/STAT3 inhibitor FLLL32 34 (5 µM; 4434-05-3; Selleckchem, Houston, TX, USA) and the STAT3 signal activator Colivelin 35 (1 µM; 867021-83-8; Santa Cruz Biotechnology, Dallas, TX, USA) were added to the culture medium before the CIH intervention. Melatonin, FLLL32, and Colivelin were dissolved in absolute ethanol. The CON group consisted of < 2.5% ethanol.
Intestinal paracellular permeability assay
A dose of 750 mg/kg of fluorescein isothiocyanate (FITC)-labelled dextran (60842-46-8; Sigma-Aldrich) suspended in phosphate-buffered saline (PBS) was gavaged in four mice per group at the end of modelling 36. After 4 h, the serum FITC-dextran fluorometry density was measured spectrophotometrically (excitation: 485 nm, emission: 528 nm; Varioskan Flash; Thermo Electron Corp., Waltham, MA, USA).
The colon (from the ileocecum to the terminal bowel) and spleen were collected and photographed under sterile conditions. Then, spleen specimens were homogenized in sterile saline (1 mL/0.1 g), and a 100-µL suspension was cultured on agar plates for 24 h and 72 h at 37°C under anaerobic conditions. The growth of nonspecific bacterial clusters was evidence of bacterial translocation 37.
Enzyme-linked immunosorbent assay (ELISA)
All mouse serum samples were assayed for melatonin concentration. Cell supernatant samples from polarized CD4+ T cells (n = 4 per group) were analysed for interleukin (IL)-17A levels. These analyses were conducted using a competitive ELISA (USCN Life Science, Wuhan, China) following the manufacturer’s instructions. The intra-assay coefficient of variation was 7.9%. Each sample was tested in duplicate.
Antibody array assay
A mouse Th1/Th2/Th17 cytokine antibody array (QAM-TH17-1-1; Ray Biotech, Norcross, GA, USA) that simultaneously detects 18 cytokines (C-C motif chemokine ligand 20, interferon-γ, IL-28A, IL-10, IL-12, IL-13, IL-17A, IL-17F, IL-1β, IL-2, IL-21, IL-22, IL-23, IL-4, IL-5, IL-6, transforming growth factor-β, and tumour necrosis factor-α) was used. Briefly, serum samples were incubated with primary antibodies in the arrays overnight at 4°C. Then, a biotin-conjugated detection antibody mixture was added to the array pools and incubated for 2 h at RT. Cy3-conjugated streptavidin was used to bind the biotin-conjugated detection antibodies for 2 h. The slides were scanned using an InnoScan 300 Microarray Scanner (Innopsys, Carbonne, France). The signal values were measured using Mapix software (Ray Biotech) and normalized using the internal positive controls in the array. Annotation enrichment bubble diagrams of the expressed genes were based on the Kyoto Encyclopaedia of Genes and Genomes (KEGG) and Gene Ontology_biological process (GO_BP) databases.
Microbial sequencing
The colonic contents were immediately frozen in liquid nitrogen for 16S rRNA analysis of the microflora. Bacterial genomic DNA was obtained using the QIAamp DNA Stool Mini Kit (51504; Qiagen, Valencia, CA, USA) according to the manufacturer’s instructions. Bacterial operational taxonomic units (OTUs) were created by clustering the reads at 97% identity in the Quantitative Insights into Microbial Ecology (QIIME) database 38. Subsequently, the OTUs were reduced to alpha diversity indices, including Shannon and Chao1. Principal coordinate analysis and UPGMA clustering were used for the beta diversity analysis. Linear discriminant analysis effect size analysis was performed to quantify the biomarkers in each group 39 using the nonparametric Kruskal–Wallis and rank tests. Then, the unpaired Wilcoxon rank-sum test was used to identify the most abundant taxa. Additionally, characteristic sequences of the OTUs were compared to the Greengenes database to predict the phenotypes of three BugBase phenotypes: Gram-negative, potential pathogenicity, and stress tolerance 40.
Haematoxylin-eosin (HE) staining and Alcian blue-periodic acid-Schiff (AB-PAS) staining
Intestinal segments were fixed in 4% paraformaldehyde overnight, embedded in paraffin for sectioning (5 µm cross-sections) and stained with HE or AB-PAS. At least 25 random fields in each colonic section were analysed from AB-PAS staining at 400× magnification to calculate the number of goblet cells/µm2. Caco-2 cells were fixed in acetone and methanol (1:1) for 15 min at RT and stained with HE solution. We calculated the numbers of injured Caco-2 cells/µm2 in at least 25 random fields of every slice at 400× magnification.
Immunohistochemical staining
Paraffin slices of the intestines were incubated overnight at 4°C with the monoclonal rabbit anti-mouse primary antibodies IL-17A (1:500; ab79056; Abcam, Cambridge, UK) and IL-23 (1:250; PA5-20239; Thermo Fisher Scientific, Waltham, MA, UK). Next, the sections were rinsed with PBS and incubated with biotinylated goat anti-rabbit immunoglobulin (Ig)-G H&L (1:250; ab205718; Abcam) for 2 h at RT. After washing, the tissues were incubated with streptavidin-horseradish peroxidase (1:250; Sigma-Aldrich) for 2 h at RT. Immunoreactivity was visualized by incubating the tissue sections in PBS containing 0.05% 3’,3-diaminobenzidine tetrahydrochloride (Sigma-Aldrich) and 0.003% hydrogen peroxide for 10 min in the dark. Control slides without primary antibodies were examined in all cases. The immunoreactive portions stained yellow-brown from the haematoxylin.
Immunofluorescent staining
The mouse colons were embedded in an optimal cutting temperature compound (Thermo Fisher Scientific) and stored at − 80°C until use. Serial sections (6 µm) were cut using a cryostat, fixed in 2% paraformaldehyde for 15 min, permeabilized in 0.2% Triton X-100 for 10 min and then blocked with 5% bovine serum albumin for 60 min. The Caco-2 cells were fixed in acetone and methanol (1:1) for 15 min at RT. After three washes in PBS for 10 min each, the cells were blocked with 10% donkey serum for 1 h at RT. Then, the colonic slices and cells were incubated overnight at 4°C with primary rabbit anti-mouse ZO-1 (1:100; ab221547; Abcam), rabbit anti-mouse occludin (1:100; ab216327; Abcam) or rabbit anti-mouse claudin-1 (1:1,000; ab211737; Abcam) in a humidified chamber. After three washes in PBS on the following day, the slides and cells were incubated with goat anti-rabbit IgG (H&L) secondary antibody (Alexa Fluor647, 1:1,000; ab150079; Abcam) for 1 h at RT in the dark. Nuclei were stained with 4’,6-diamidino-2-phenylindole, and the slices were analysed using confocal microscopy (LSM 780; Carl Zeiss, Zena, Germany).
Scanning electron microscopy of the processed samples
One-centimetre colonic sections were cut longitudinally to expose the intraluminal biofilm and fixed in 2.5% w/v glutaraldehyde in 0.1 M cacodylate buffer (pH 7.2) overnight. Next, the samples were placed in fresh 0.1 M cacodylate buffer before dehydration through an ethanol series (25, 50, 75, 95, 95 and 100% w/v, 1-h incubations of each sample). The sections were air-dried using carbon cement (Agar Scientific, Stansted, UK) and sputter-coated with platinum under a high vacuum using the Q150T ES system (Quorum Technologies, Chico, CA, USA) before being viewed in a chamber pressure (3.5 × 10− 3 Pa; 0% humidity) using an accelerating voltage of 5 kV at extra high tension with a secondary electron detector.
Western blotting (WB)
Total protein of the colonic segments was extracted using a lysis buffer (62.5 mmol/L Tris-HCl, 2% SDS, 10% glycerol, pH 6.8), and centrifuged at 12,000 g for 10 min at 4°C to collect the supernatant. The protein concentration was determined using a bicinchoninic acid protein assay kit (ab102536; Abcam). Then, 20 µg of boiled proteins in a loading buffer was electrophoresed by 10% sodium dodecyl sulphate-polyacrylamide gel electrophoresis. After electro-transferring the samples onto a polyvinylidene difluoride membrane (Millipore, Milford, MA, USA), they were blocked with 5% skim milk in 1× Tris-buffered saline with Tween (TBST) for 2 h at RT. The membranes were incubated with the following monoclonal rabbit anti-mouse primary antibodies (β-actin, 1:2,000, ab8226; ZO-1, 1:1,000, ab221547; occludin, 1:2,000, ab216327; claudin-1, 1:500, ab211737; STAT3, 1:1,000, ab68153; phosphorylated (p)-STAT3, 1:2,000, ab76315; Abcam) overnight at 4°C. After washing with TBST, the membranes were incubated with horseradish peroxidase-conjugated goat anti-rabbit IgG (1:5,000, CW0103; CoWin Biosciences, Cambridge, MA, USA) for 2 h at 37°C. Immunoblotting was performed using an enhanced chemiluminescence WB kit (CW0049; CoWin Biosciences). The bands were scanned, and the integral optical density was measured using ImageJ software (version 1.8.0; NIH, Bethesda, MD, USA). The results were obtained from two experiments.
Preparation of lamina propria mononuclear cells (LPMCs) for flow cytometry
The mouse colonic tissues were cleaned of mesentery, opened longitudinally and fragmented with scissors. Next, they were incubated in Hank’s balanced salt solution (HBSS) without Ca2+ and Mg2+ containing 10 mM HEPES, 5 mM ethylenediaminetetraacetic acid, 5% FBS, and 1 mM dithiothreitol for 20 min with continuous shaking at 37°C. The supernatants containing the intraepithelial lymphocytes were removed. The residual lamina propria were cut into smaller pieces and digested in HBSS with Ca2+ and Mg2+ containing 10 mM HEPES, 10% FBS, 1 mg/mL collagenase D, 0.1 mg/mL deoxyribonuclease I and 0.1 U/mL dispase at 37°C for 30 min with persistent shaking. The LPMCs were isolated from ileal specimens using the murine Lamina Propria Dissociation Kit (130-097-410; Miltenyi Biotec, Charlestown, MA, USA), washed with PBS (with 0.5% bovine serum albumin), and re-suspended in PBS for further analysis.
In vitro CD4+ T cell polarization assay
After preparing the single-cell suspension of the spleen from 6-week-old mice, naïve CD4+ T cells (CD4+ CD45RA+ and CD45RO−) were negatively selected using the mouse naïve CD4+ T Cell Isolation Kit (130-104-453; Miltenyi Biotec) and cultured in TexMACS medium (130-097-196; Miltenyi Biotec) with 50 µM 2-mercaptoethanol and penicillin/streptomycin (100 IU/mL). Naïve CD4+ T cells were stimulated with anti-CD3/CD28-coated microbeads at a 1:1 bead-to-cell ratio (11132D; Thermo Fisher Scientific) in the presence of IL-1β (10 ng/mL; 200-01B; PeproTech, Rocky Hill, NJ, USA), and IL-6 (20 ng/mL; 200-06; PeproTech) to polarize the Th17 cells for 3 days, along with exposure to CIH (3% O2 for 10 min followed by 21% O2 for 5 min, for 12 cycles per day) 41. The polarized CD4+ T cells were randomly divided into five groups: CON, CIH, CIH + MT, CIH + JAK2/STAT3 inhibitor and CIH + MT + STAT3 activator. Melatonin, FLLL32 and Colivelin were added to the culture medium of the naïve CD4+ T cells at the same concentrations as Caco-2 cells before differentiation.
Flow cytometry to detect Th17 cells
LPMCs and polarized CD4+ T cells (1 × 106/mL) for intracellular cytokine staining were stimulated at 37°C for 5 h using the Leukocyte Activation Cocktail (550583; BD Biosciences, San Diego, CA, USA) in the presence of the GolgiStop™ Protein Transport Inhibitor (Brefeldin A, 554724; BD Biosciences) and then pre-treated with Fc block CD16/CD32 antibodies (553142, BD Biosciences; clone: 2.4G2) to block nonspecific binding. After staining for surface markers (CD45, APC-Cy7, 557659; CD3, APC, 565643; CD4, FITC, 553046; and CD8, Percp-cy5.5, 551162; BD Biosciences), the cells were fixed and permeabilized using Cytofix/Cytoperm (555028; BD Biosciences) and then stained with fluorochrome-coupled antibodies against IL-17A (PE, 559502; BD Biosciences) and FVS510 living/dead cell dye (BV510, 564406; BD Biosciences). Fluorescence data were collected using the FACS Canto II instrument (BD Biosciences) and analysed using FlowJo software (Ashland, OR, USA).
Quantitative real-time polymerase chain reaction (qRT-PCR)
Total RNA from the colon and polarized CD4+ T cells was extracted using TRIzol reagent (Invitrogen, Carlsbad, CA, USA). RNA purity and concentration (260 nm/280 nm) were determined using the NanoDrop 2000 spectrophotometer (Thermo Fisher Scientific). Then, total RNA (1 µg) was reverse-transcribed into complementary DNA for mRNA detection using the PrimeScript RT Master Mix kit (Takara Bio, Shiga, Japan) at 37°C for 30 min and 85°C for 15 s, and stored at 4°C. qRT-PCR was performed using the ABI PRISM 7500 real-time PCR Detection System (Life Technologies, Carlsbad, CA, USA) and SYBR Green Master Mix (Takara Bio). The PCR cycle was pre-treatment at 95°C for 10 min followed by 40 cycles at 95°C for 30 s, 60°C for 30 s, and 68°C for 30 s, with storage at 4°C. Validated qRT-PCR (mouse/human specific) primers for ROR-γt, JAK1, JAK2, JAK3, Toll-like receptor (TLR) 2, TLR4, nuclear factor-κB, mitogen-activated protein kinase phosphatase, phosphatidylinositol kinase/Akt, adenosine monophosphate-activated protein kinase, sirtuin 1, STAT3 and β-actin were obtained from SA Biosciences (Qiagen). mRNA expression was calculated using the 2−ΔΔCT method relative to the β-actin reference gene using CFX Manager software (version 1.6).