Participants, Interventions And Outcomes
Study setting {9}
The trial is embedded within the Swiss Spinal Cord Injury Cohort Study (SwiSCI) as a Nested Project and benefits from the services of the SwiSCI Biobank. We decided to run this trial in a single center, because the primary objective is to evaluate the feasibility of a main trial. The trial center is with 206 beds the largest rehabilitation and acute care center specialized in SCI in Switzerland.
Eligibility criteria {10}
Individuals with acute SCI (duration SCI ≤ 56 days) from 18 to 70 years of age during primary rehabilitation (hospitalization at least until termination of trial intervention) are eligible for the trial. The onset of SCI has to have occurred within 72 hours. Eligible patients need to consent to participation in the SwiSCI cohort study prior to consenting to the present trial. The presence of any one of the following criteria will lead to the exclusion of an individual or trial participant: bladder evacuation by permanent transurethral catheterization at the trial start, known hypersensitivity to investigational product or placebo (galactose, fructose, lactose), any other therapies for preventing UTIs (e.g. urine acidification, phytotherapy), immunomodulation (apart from routine vaccinations) or -suppressant therapy, oncological or autoimmune disease, diabetes mellitus, nephropathy, bladder stones, chronic bacterial prostatitis, recurrent UTIs prior to SCI, women who are pregnant or breast feeding, drug or alcohol abuse, suspected inability to follow the procedures of the trial (e.g. language problems, psychological disorders, dementia) and participation in a interventional trial affecting the urinary tract or immune system during and within the 30 days preceding the present trial.
Who will take informed consent? {26a}
Investigators who are board-certified neuro-urologists will inform eligible patients about the trial and request them to read the trial information. The ethics committee has approved the written trial information and consent form. The written informed consent will be obtained not earlier than 24 h after the initial oral information. Eligible patients will have the opportunity to ask questions regarding the trial. There will be no monetary or other compensation for trial participation.
Additional consent provisions for collection and use of participant data and biological specimens {26b}
Potential trial participants will be asked to give additional consent for the use of the personal health data and biological specimens collected during the trial in future clinical research projects.
Interventions
Explanation for the choice of comparators {6b}
The active intervention has been approved in Switzerland for the prevention of recurrent infections of the lower urinary tract and as an auxiliary treatment of acute UTIs. Placebo is the standard comparator in clinical trials investigating the effect of a medicinal product, if placebo treatment is ethically justifiable. In the present trial, participants allocated to the placebo group will not incur any disadvantages, because the trial protocol does not prevent standard clinical treatment of UTIs with antibiotics. The effectiveness of Uro-Vaxom® has no yet been established in individuals with SCI, and participants allocated to the placebo group may receive Uro-Vaxom® treatment after trial termination.
Intervention description {11a}
Experimental group
Uro-Vaxom® (OM Pharma SA, Meyrin, Switzerland) is a lyophilized lysate of 18 E. coli strains (6 mg) for oral application. The treatment will last 90 days (one capsule daily). The dose and duration of the experimental treatment has been chosen according to the instructions in the Swiss medicinal product compendium.
Control group
Off-the-shelf placebo tablets (P-Dragees, Zentiva Pharma GmbH, Germany) will be used as control treatment. According to the treatment regimen of the experimental group, trial participants in the control group will receive one sugar-coated tablet daily for 90 days.
Criteria for discontinuing or modifying allocated interventions {11b}
Allocated treatments will not be modified. The criteria for discontinuation of the interventions are informed consent withdrawal, an intervention-related serious adverse event (SAE) or the presence of a listed exclusion criterion.
Strategies to improve adherence to interventions {11c}
In-house patients during primary rehabilitation will be enrolled. Trial participants will remain hospitalized for the entire duration of the trial intervention (see eligibility criteria). The nursing staff will prepare the trial drug or placebo daily and monitor the ingestion. Any failure to ingest the trial drug or placebo will be documented and reported to the principal investigator.
The trial coordinator will monitor the reporting and documentation of UTIs (symptoms, laboratory results) and their treatment in trial specific case report forms (CRFs). If trial participants get discharged from primary rehabilitation prior to trial termination and do not return the CRFs regarding UTIs, the trial coordinator will collect the required data during telephone interviews.
Relevant concomitant care permitted or prohibited during the trial ({11d})
Standard clinical treatment of acute UTIs (i.e. antibiotics, bladder irrigation) will be permitted. However, other measures to prevent the occurrence of UTIs (e.g. urine acidification or phytotherapy) will not be permitted. According to evidence-based medicine criteria, none of the currently applied prophylactic measures can be recommended.
Provisions for post-trial care {30}
There are no provisions for post-trial care, as there is no risk of harm as a result of the trial intervention after intervention termination and beyond follow up period.
Outcomes {12}
Primary outcome
The randomization rate will be determined by calculating the proportion of eligible patients who are enrolled and randomized during the trial.
Secondary outcomes: feasibility
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positive screening rate: proportion of screened patients who are eligible
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recruitment rate: proportion of eligible patients who gave consent
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treatment-specific retention rates: proportion of randomized trial participants in each treatment arm who finish the trail
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treatment-specific adherence rate: proportion of trial participants allocated to a treatment arm who complete (≥ 60 capsules / tablets taken) the treatment
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reasons for premature trial termination
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assessment completion rate: proportion of planned assessments that are completed
Secondary outcomes: clinical measures
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UTI symptoms during the treatment and the follow-up period: self-report questionnaire completed fortnightly (new/increased incontinence/leaking or increased urgency or increased catheterization frequency, fever/chills, increase in spasticity, malaise or feeling sick or fatigue, cloudy and foul-smelling urine, bladder or lower back pain or pain during urination, new/increased occurrence of goosebumps or sweating)
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urine analysis (at baseline, treatment end, trial end and if clinically indicated): leucocytes, nitrite, pH, protein, blood determined by dip stick and leucocyte count in sediment
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urine culture results (if clinically indicated): bacterial species, colony-forming units (cfu) and antibiotic resistance
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UTI count: an event is counted as a UTI, if ≥ 10'000 cfu/ml and a positive urine analysis result (leucocytes, nitrite) are present.
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urinary microbiome (at baseline, treatment end, trial end)
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urinary proteome/transcriptome (at baseline, treatment end, trial end): cytokines, immunoglobulin (Ig)A levels
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blood cell count (at baseline, treatment end, trial end): leucocytes, erythrocytes, hemoglobin, hematocrit, mean corpuscular volume, mean corpuscular hemoglobin, mean corpuscular hemoglobin volume, platelets
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white blood cell differential (at baseline, treatment end, trial end): granulocytes, neutrophils, eosinophils, basophils, monocytes and lymphocytes
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side effects: self-report questionnaire completed fortnightly during the treatment period
Other outcomes of interest
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patient characteristics: age, sex, lesion level, American Spinal Injury Association impairment scale (AIS), duration SCI, etiology SCI
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bladder evacuation method
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concurrent medication
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medical history: infections, urinary tract disease and surgery
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self-report questionnaire trial end: trial experience (burden trial medication, burden questionnaire completion, "would you participate again?", "would you recommend trial participation?"), satisfaction with treatment effect and assumption regarding treatment allocation.
Participant timeline {13}
The schedule of enrolment, interventions, assessments and visits for participants are shown in Fig. 1. Eligible patients will be approached regarding trial participation after admission for primary rehabilitation as soon as their physical and mental condition allows. The trial intervention will commence not later than 56 days after SCI has occurred. Prior to intervention start, blood and urine samples will be taken as well as at the end of the intervention and 3 months after intervention termination (Fig. 1). The trial intervention will last 90 days. During the intervention and follow-up period (3 months), the occurrence of UTIs, symptoms and treatment will be recorded. At the trial end, participants will fill out a questionnaire regarding their experiences during the course of the trial. In participants who prematurely stop the trial, a safety follow-up period of 7 days will be observed to monitor the occurrence of SAEs.
Sample size {14}
A total of 24 participants will be included based on the rule of thumb by Julious and Owen [16]. If more than 6 participants in a treatment arm terminate the trial prematurely, additional participants will be recruited until at least 6 have completed the trial protocol.
Recruitment {15}
All patients with acute SCI admitted for primary rehabilitation will be screened for in- and exclusion criteria by authorized trial staff.
Assignment Of Interventions: Allocation
Sequence generation {16a}
The allocation sequence was generated stratified according to sex, with a 1:1 allocation ratio and variable block sizes using the R software environment (version 3.6.0, Copyright 2019, The R Foundation for Statistical Computing) and the package “blockrand”. The allocation list contains 20 male and 12 female participants.
Concealment mechanism {16b}
The allocation list has been imported into the trial database. Upon registration of a new trial participant in the database, a sequential number will be allocated for each stratum separately. The hospital pharmacy keeps the list linking the allocation number with the treatment arm (A or B), and will deliver the allocated treatment to the ward. The trial personnel has no access to the list. The biostatistician will receive the blinded treatment allocation (A or B) list when data collection will have been completed. Furthermore, the laboratory personnel will be informed concerning the blinded treatment allocation, in order to ensure balance between allocation groups for the analysis of a specific batch of samples and thus avoid a batch-effect.
Implementation {16c}
A biostatistician of the Swiss Paraplegic Centre Clinical Trial Unit (CTU) has generated the allocation sequence. Authorized trial personnel will register participants in the trial database and inform the head of the hospital pharmacy regarding the allocation number. The head of the pharmacy will assign participants to treatments based on the allocation list.
Assignment Of Interventions: Blinding
Who will be blinded {17a}
The trial interventions (Uro-Vaxom® and placebo) will be delivered to the ward within the original packaging. The nursing staff will daily prepare a single dose of the allocated treatment (removing capsule or tablet from blister or container). Trial participants will not be informed regarding the treatment allocation. The trial treatment will be prescribed as "Uro-Vaxo trial medication" in the electronic medical records system. The trial personnel (outcome assessors) and biostatistician will be blinded regarding treatment allocation.
Procedure for unblinding if needed {17b}
Unblinding will be permissible in the occurrence of a SAE. A code break is not required because the nursing staff is not blinded to the treatment arm. Furthermore, unblinding will be performed after having completed all data analyses.
Data Collection And Management
Plans for assessment and collection of outcomes {18a}
Feasibility outcomes
An electronic list (Microsoft Excel 2016) of all screened patients will be maintained, and information regarding eligibility, exclusion criteria and enrolment will be collected. Additionally, a paper (p)CRF regarding all in- and exclusion criteria will be completed before enrolment. Exclusion criteria will also be recorded on a pCRF fortnightly during the intervention period as well as at the end of the intervention and follow-up period. Any premature trial termination and the reasons will be documented in an electronic (e)CRF of the trial database. Furthermore, the number of ingested trial medication (capsules / tablets) will be documented in an eCRF.
Clinical outcomes
During the intervention period, trial participants will complete a self-developed paper questionnaire regarding UTI symptoms and treatment side effects every two weeks. The following UTI symptoms are listed: fever / shivering; new or increased urinary incontinence / leaking, increased urgency, increased catheterization frequency; increased spasticity; malaise, feeling sick, fatigue; cloudy, foul-smelling urine; abdominal / lower back / kidney pain, pain during bladder voiding; goose bumps, increased sweating. Participants have the possibility to list any other symptoms experienced. An event is counted as a symptomatic UTI if at least one bladder symptom (new or increased urinary incontinence / leaking, increased urgency, increased catheterization frequency, pain during bladder voiding) and another symptom have been reported together with a positive urine analysis result (leucocytes, nitrite) and a growth of ≥ 10,000 cfu/ml in the urine culture (sample collected by via naturalis).
The following side effects are listed: headache; abdominal pain; nausea, vomiting, diarrhea, heartburn. Participants have the possibility to list any other side effects experienced. In the event of a symptomatic UTI, data from clinical routine assessments (i.e. urinary status and urine culture results) and the chosen treatment will be collected from the electronic medical chart file and recorded in an eCRF.
During the follow-up period, trial participants will complete a self-developed paper questionnaire regarding UTI symptoms (same as above), assessments (dip stick and urine culture) and treatment fortnightly. In the event of a symptomatic UTI in still hospitalized trial participants, data from clinical routine assessments (i.e. urinary status and urine culture results) and the chosen treatment will be collected from the electronic medical chart file and recorded in an eCRF.
Biological outcomes
At the three assessment time points (baseline, treatment end, trial end), urine (30 ml) and blood samples (30 ml) will be taken. The urinary status, proteome and transcriptome, microbiome as well as the standard blood cell count and white blood cell differential will be evaluated.
In order to assess the urinary microbiome, urine will be cultured using a streamlined enhanced quantitative urine culture described by Price et al. [17]. Microbial identification will be performed using matrix-assisted laser desorption/ionization–time-of-flight mass spectrometry (MALDI-TOF MS; Bruker Daltonics, Billerica, MA, USA) of distinct colonies. The colony morphology will be described and quantified. Furthermore within 4 h of collection, urine will be spun at 3000 rpm, and the resulting pellet will be suspended in 1 ml urine for storage at − 80 °C until deoxyribonucleic acid (DNA) extraction. The DNA extraction will be accomplished using the QIAamp PowerFecal DNA kit (QIAGEN, Hilden, Germany) according to the manufacturer`s protocol. Whole genome (sufficient quantity of genomic DNA extracted) or 16S sequencing (smaller quantity of DNA extracted) will be performed using the MinION nanopore sequencer (Oxford Nanopore Technologies, Oxford, UK). Sequencing libraries will be prepared using the Nanopore Ligation Sequencing Kit (Oxford Nanopore, Oxford, UK) and sequenced with the MinION flow cell using a high accuracy model. Bioinformatics analysis will use the FASTQ WIMP (“What’s In My Pot”) (Oxford Nanopore, Oxford, UK) analysis workflow validated for microbiome analysis.
In order to assess the relevant proteins of the urinary proteome and transcriptome, we will use two sample types: 1) centrifuged and sterile filtered (0.22 µm) urine, 2) urine pellets (where present). These samples will be analyzed by enzyme-linked immunosorbent assay (ELISA) for total quantity of IgA antibodies and quantity of IgA antibodies against the E. coli antigens included in Uro-Vaxom®. The quantity of pro- and anti-inflammatory cytokines such as interferon (IFN)-γ, tumor necrosis factor (TNF)-α, tumor growth factor (TGF)-β and interleukin (IL)-1β, IL-2, IL-4, IL-5, IL-6, IL-8, IL-10, IL-13) will be determined using ELISA and reverse transcription polymerase chain reaction (RT-PCR) arrays of extracted ribonucleic acid (RNA).
Other outcomes of interest
Patient characteristics, bladder evacuation method and concurrent medication will be collected from the electronic medical chart file and recorded in an eCRF. Data regarding the medical history will be collected using a pCRF. At the end of the follow-up period, participants will fill out a self-developed pCRF regarding their experiences, treatment satisfaction and assumption regarding treatment allocation.
Plans to promote participant retention and complete follow-up {18b}
Trial participants will remain hospitalized during the treatment period (see eligibility criteria). If a trial participant is discharged before completion of the trial, telephone interviews will be planned to collect outcome measures regarding UTIs, in case the participant does not return the self-report questionnaires.
In participants who discontinue or deviate from intervention protocols, all outcome data as per protocol will be collected as along as participants stay in the trial. In case of premature trial termination, clinical routine data regarding UTIs will be collected, if participants have not rejected the use of health-related data and samples for research purposes (general consent).
Data management {19}
Trial source data will be recorded in pCRFs or directly in eCRFs (see above). All data will be recorded encrypted. Trial data from pCRFs will be transferred to eCRFs in a timely manner. The eCRFs will be kept current to reflect the participant's status during the course of the trial. The eCRFs have been created in the web-based data management system secuTrial® (iAS, Berlin, Germany). The system is hosted on a secure in-house server. Only trained and authorized trial personnel will enter data into the electronic database.
Prior to the release into the productive environment, the electronic trial database has been tested by the data manager and one investigator. Specific definitions of data entry fields as well as range and consistency checks for entered data values will promote data quality. Furthermore, a monitoring plan (see below) is set-up to ensure that the entered data values are accurate. All entered data will be reviewed and verified by an investigator and signed-off by the principal investigator prior to data export for analyses in statistical software.
The biological data derived from the encrypted samples will be stored on a secure server of the hospital. Data will only accessible by members of the trial team.
Confidentiality {27}
The investigators affirm and uphold the principle of the participant's right to privacy and will comply with the applicable privacy laws. The anonymity of the participants will be guaranteed when presenting the data at scientific meetings or publishing them in scientific journals. Individual medical information obtained as a result of this trial will be considered confidential and will not be disclosed to third parties. Direct access to not encrypted source documents will be permitted for authorized third parties for purposes of monitoring, audits and inspections. The trial staff will have access to the trial data based on authorization by the principle investigator. Confidentiality will be established by utilizing identification codes to link participants with trial data. The identification codes will not contain name, initials, date of birth or any other personal identification numbers (e.g. social security number, patient identification number etc.). The list with the assigned trial identification codes and minimal personal information (i.e. name, date of birth) will be stored in a locked cabinet at the trial site. All CRFs and data collection files will be identified with the trial code only. After trial closure, all trial data will be stored in a locked archive room with limited access for 10 years.
Plans for collection, laboratory evaluation and storage of biological specimens for genetic or molecular analysis in this trial/future use {33}
All processing of biological specimens will be done with encrypted samples (blood and urine). The samples from each assessment time point will be transferred for processing to the SwiSCI Biobank, which has been audited and certified by the Swiss Biobanking Platform (SBP). The processing of the samples will be done preferably by a team of two persons (preferably) according to validated workflows and SOPs, starting with the most perishable sample (urine), in order to ensure the shortest possible processing (needle-to-freezer) time. A biobanking software (FreezerPro Brooks, Chelmsford, MA, USA) will be used for documentation as well as sample and aliquot tracking. Samples will be accessed and withdrawn according to validated procedures and analyzed according to the trial protocol. Any unused samples will be stored for at least 5 years after the end of the trial.
Statistical Methods
Statistical methods for primary and secondary outcomes {20a}
All the data of randomized trial participants will be analyzed blinded and on an intention-to-treat basis. This is a feasibility trial, and thus, descriptive statistics will be used. All outcome measures will be presented as point estimates and 95% confidence intervals. Differences in clinical and laboratory outcome measures between the two treatment groups will be evaluated based on confidence intervals.
Interim analyses {21b}
There will be no interim analyses.
Methods for additional analyses (e.g. subgroup analyses) {20b}
There will be no subgroup analyses.
Methods in analysis to handle protocol non-adherence and any statistical methods to handle missing data {20c}
All available data will be included for intention-to-treat analysis. Missing data will not be imputed.
Plans to give access to the full protocol, participant level-data and statistical code {31c}
Access to the full protocol, participant level-data and statistical code will be given upon reasonable request to the corresponding author.
Oversight And Monitoring
Composition of the coordinating centre and trial steering committee {5d}
There is no coordinating center or trial steering committee.
Composition of the data monitoring committee, its role and reporting structure {21a}
This is a mono-centric pilot trial evaluating the feasibility of a main trial investigating an approved medicinal product with a low risk profile. Thus, there is no data monitoring committee.
Adverse event reporting and harms {22}
Treatment side effects are collected from self-report questionnaires fortnightly during the treatment period.
All SAEs are collected and documented from the start of the trial treatment until 7 days after completing or terminating the treatment (safety follow-up time). Any suspected unexpected (not consistent with product information) serious adverse reaction (SUSAR) will be reported to the ethics committee within 15 days (events resulting in death within 7 days) of becoming aware of the event.
Frequency and plans for auditing trial conduct {23}
An independent monitor from the CTU of the Swiss Paraplegic Centre will verify that the rights and well-being of the trial participants are protected; the collected data are accurate, complete and verifiable from source documents and that the conduct of the trial complies with the currently approved protocol, the International Council for Harmonisation E6(R2) Good Clinical Practice Guideline and the applicable regulatory requirements. Monitoring will be performed according to the monitoring plan (version 1.1 dated 18.11.2019) developed for the trial (Supplement 1).
Plans for communicating important protocol amendments to relevant parties (e.g. trial participants, ethical committees) {25}
Substantial amendments are submitted to the ethics committee for approval before implementation. In emergency circumstances, deviations from the protocol to protect the rights, safety and well-being of trial participants will proceed without prior approval by the ethics committee. However, these deviations and measures will be documented and reported to the ethics committee within 7 days. Active trial participants will be informed regarding all relevant protocol amendments concerning their rights, safety and well-being.
All non-substantial amendments are communicated to the ethics committee within the annual safety report.
Dissemination Plans {31a}
The data from the present trial will be presented at scientific meetings and published in peer-reviewed journals. The authorship will be determined based on the contributions of the individuals involved.