Culturing and Strains. K. veneficum strain CCMP 2064 that produces Kmtx2 was acquired from the Center for the Culture of Marine Phytoplankton (CCMP). CCMP 2064 was isolated in November 1998 from a fish-kill on the Wilmington River, Georgia and deposited on May 3, 2003. CCMP 2064 is unialgal but not axenic and was cultured phototrophically in 15 psu filtered (0.22 μm) natural seawater combined with f/2 nutrients and vitamins without Si-1 at 100 Einstein m-2s-1 and 20°C ambient temperature. Cell densities were measured using a Coulter Multisizer II (Beckman-Coulter) counter and cells mL-1 determined using Accucomp (Version 2.01) software. Abbotoxin and 59-E-chloro-Abbotoxin were isolated from the type species (PLY 103) for K. veneficum originally isolated in 1950 from Plymouth Sound, UK (50.364 N, 04.182 W). PLY 103 was grown in 500 ml glass flasks with 300 ml of culture in ERD-SCHREIBER medium at 15 degrees and 12:12 light:dark cycle. ambient temperature. Richard Pipe of the MBA initially grew 3 liters of PLY 103 (~19, 700 cells/ml; ~6 X 107 cells). The cultures were filtered on GF/F filters and the filters and frozen filtrate on dry ice were sent to Maryland. Subsequently, he grew 14 liters of PLY 103 grown in Erd-Schreiber Media containing 50 mg NaH13CO4 (sodium bicarbonate) and placed the filtrate on a 55g C18 columns (AnaLogix, Sorbtech Technologies) for shipping to Maryland.
Sterol Isolation10. Ergosterol, cholesterol and epicholesterol were obtained from Avanti Polar Lipids (Alabaster, AL). For dinoflagellate sterols, cultures of the KmTx2-producing K. veneficum isolate CCMP 2282, grown as described above were filtered onto glass-fibre filters and extracted twice with chloroform/methanol (2:1, v/v). Neutral lipids were isolated using activated silica according to Yongmanitchai and Ward 33. Neutral lipids were further separated using thin-layer chromatography (TLC). Individual bands were scraped and the sterol-containing fraction was confirmed by thin-layer chromatography-flame ionization detection (TLC-FID) using an IATROSCAN TH-10 TLC-FID Analyzer (Iatro Laboratories, Tokyo, Japan). The sterol containing band was further separated by reversed-phase high-performance liquid chromatography (HPLC). Sterol peaks were positively identified by gas chromatography mass spectrometry (GC-MS) according to Leblond and Chapman 34. The fraction containing (24S)-4α-methyl- 5α-ergosta-8(14),22-dien-3β-ol (gymnodinosterol) was determined to be >95% pure. Dinosterol and amphisterol was purified similarly from Crypthecodinium cohnii (ATCC 30334) and Amphidinium carterae (CCMP 1314), respectively. Each were determined to be > 95% pure by GC-MS.
Toxin Isolation. The KmTx2 standard was isolated by the following procedure 7. To obtain adequate quantities of metabolite for structural characterization, 5.8 x109 cells (40 L of culture) were grown with NaH13CO3 (50 mg/L) for 28 days, filtered onto 125 mm GF/F filters (Whatman), and the metabolite (>95% of recovered material) from the filtrate was concentrated on three 55 g C18 columns (AnaLogix, Sorbtech Technologies) in parallel. Extraction of the cells with MeOH only provided 5% of the recovered metabolite. The columns had been activated by passing 200 mL MeOH followed by 200 mL HPLC-grade water through each column. Metabolite was eluted using 200 mL MeOH:water starting at 100% water and continuing in 20% increments to 100% MeOH. The 60% and 80% MeOH fractions were collected, pooled and dried under vacuum at 40 °C. The concentrated metabolite from the pooled 60-80% C18 eluent was then purified using reverse phase chromatography on a semi-preparative scale C18 column (Phenomenex Hyperprep HS C18-80S, 250 × 10 mm, 5 µ), at a flow rate of 4 mL/min. Fractions corresponding to KmTx2 were collected using a fraction collector (61364A, AFC, Agilent) based on the known retention times. Fractions with the same elution times were pooled and dried under vacuum and re-suspended in MeOH:water (80:20). Because of co-elution of congeners, each pooled fraction was further separated on normal phase chromatography as described 7 to provide pure KmTx2.
To purify Abbotoxin and 59-E-chloro-Abbotoxin the same procedure as described above was performed. Extraction of the cells with MeOH only provided 5% of the recovered metabolite. From the 60-80% methanol fraction off the C18 flash columns two major fractions could be obtained from the semi-preparative C18 column (Figure 1B). The two active fractions contained co-elution of a 58 dalton congener (~ 1 to 5%) which required each pooled fraction to be further separated on normal phase chromatography as described 7. From the 14 liters of PLY 103 2 mg of Abbotoxin and 2.1 mg 59-E-chloro-Abbotoxin were purified. The C13 enrichment was estimated to be about 10%.
Amphidinol 18 ([M+Na]+ m/z] 1381.82575) and its 7-sulfate ([M − H + 2Na (calcd for C71H121Na2O27S, 1483.76059) 35 derivative was isolated from Amphidinium carterae (CCMP 1314). The dinoflagellate was cultured in L1 medium at 20.0 ± 0.5 °C, under a 14:10 light/dark regime and at 100 μmol m-2s-1. The cells were mass-cultivated in a 40 liter container with pH (Ph 8.50) control through addition of CO2. The initial cell density was around 8000 cells/mL. During the exponential phase, media was refreshed with 4 L additions of L1 medium. In the stationary phase (final cell density: 480 000 cells/ mL), the 40 L of culture was harvested in a swing-out centrifuge, for 10 min at 4 °C at 2300 g. The cell pellet (9.8 g) was stored at −80 °C until analysis.
The cell pellet of was extracted sequentially with 250 mL of CH2CL2/MeOH (1:2, 1:1, 2:1); the combined extracts were added to a 2 L separatory funnel, and water added to obtain two phases. The lower organic phase was removed and saved for lipid and sterol isolation. The upper phase contained greater than 95% of the amphidinols. After dilution tenfold with water, the extract was placed on a 55 g C18 column (AnaLogix, Sorbtech Technologies) and fractionated as described above for karlotoxins.
Sterolysin-Sterol Interactions by Surface Plasma Resonance. By using surface plasmon resonance (SPR) techniques, which are shown to be useful for membrane-bound peptides and drugs, we successfully evaluated interaction between various sterolysins and sterol surfaces. Toxin binding interactions with various lipids were investigated using Biacore T200 and Series S Sensor Chip HPA. The HPA chip surface is composed of alkanethiol (C11) to facilitate adsorption of a lipid monolayer. The HPA chip was prepared according to the instructions for use. The running buffer used was HBS (10 mM HEPES, 150 mM NaCl, pH 7.4). The HPA chip was first pre-conditioned by injection of 40 mM octyl D-glucoside for 5 minutes at 10 µL/minute. Cholesterol, Dinosterol, and epi-Cholesterol were each captured to approximately 1000 RU onto flow cells 2, 3, and 4 respectively using a 30 minute injection at 2 µL/minute. Flow cell 1 containing octyl D-glucoside served as a negative control and reference. Each of the lipid surfaces were washed using a 30 second injection of 10 mM NaOH to stabilize the baseline, and then blocked using 5 minute injection of 0.1 mg/mL BSA. Toxin binding specificity was measured using 1-10 µM KmTx 2 injected over all four flow cells at 10 µL/minute. Reference subtracted sensorgrams are shown. Detection of sterolysin affinity was carried out in HEPES buffer (pH 7.4) as running and injection media. Sterolysin dissolved in HEPES buffer was then passed on the sensor chip treated with sterols. The SPR response increased immediately after injection due to interaction between sterolysin in the sample solution and sterols immobilized on the surface of the sensor chip. To evaluate sterolysin binding to sterol-containing or sterol-free surface, the SPR response in the control lane was subtracted from that in the sterol -captured lane. Sterolysins firmly interacted with the sensor-chip surface and the sterolysins could be washed off. Toxin binding interactions with various lipids were investigated using Biacore T200 and Series S Sensor Chip HPA. The HPA chip surface is composed of alkanethiol to facilitate adsorption of a lipid monolayer. The HPA chip was prepared according to the instructions for use. The running buffer used was HBS (10 mM HEPES, 150 mM NaCl, pH 7.4). The HPA chip was first pre-conditioned by injection of 40 mM octyl D-glucoside for 5 minutes at 10 µL/minute. Cholesterol, Dinosterol, and epi-Cholesterol were each captured to approximately 1000 RU onto flow cells 2, 3, and 4 respectively using a 30-minute injection at 2 µL/minute. Flow cell 1 containing octyl D-glucoside served as a negative control and reference. Each of the lipid surfaces were washed using a 30 second injection of 10 mM NaOH to stabilize the baseline, and then blocked using 5-minute injection of 0.1 mg/mL BSA. Toxin binding specificity, as well as approximate kinetics and affinity were measured using a single concentration of 1.5 µM toxin injected over all four flow cells at 10 µL/minute. Reference subtracted and blank subtracted binding responses were fitted using a 1:1 model, with responses in blue and fitted curves in black.
Toxin reconstitution into artificial lipid planar bilayers. Planar lipid bilayers were formed across a 150 μm-diameter aperture in a Delrin partition as described elsewhere 36. Lipid bilayer-forming solution contained a 4.7:2.8:1.9:0.6 mixture of 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (DOPE): 1,2-dioleoyl-sn-glycero-3-phospho-L-serine (DOPS): 1,2-dioleoyl-sn-glycero-3-phosphocholine (DOPC): sterol (1 of 5, cholesterol, ergosterol, brassicasterol, dinosterol and gymnodinosterol) (Avanti Polar Lipids, Alabaster, AL), dissolved in decane (50 mg/ml). KmTx 2 100-200 ng/ml was added to the solution in one side of the bilayer (defined as the Cis chamber; virtual ground). The membrane potential was held in the other side, defined as the Trans chamber. Standard solutions contained KCl (at the indicated concentrations) and 5 mM HEPES (pH 7.35). To record single-channel activity, the Cis and Trans chambers were connected via Ag/AgCl electrodes in series to the head stage of an Axopatch 200B amplifier in the voltage-clamp mode. Unitary current was recorded with commercially available acquisition software (pClamp-9; Molecular Devices, LLC, Sunnyvale, CA) and a 16-bit A/D-D/A converter (Digidata 1322A, Axon Instruments) controlled by a 32-bit PC. Unitary current was digitized at 5 kHz and filtered at 2 kHz. Data analysis was conducted with the analysis package of the same acquisition software (pClamp-9, Molecular Devices, LLC, Sunnyvale, CA).
General Structural Elucidation Experiments38. 1H, 13C, DEPT, COSY, HSQC, HMBC, NOESY, and ROESY spectra of all congeners were measured on a Bruker Avance or a Varian INOVA 600 MHz NMR equipped with a 3 mm probe.
NMR Processing Procedures. Comprehensive NMR data sets were collected for every karltotoxin sample available. Individual experiments were then compared to the known KmTx2 standard data set. The methodologies used here have been applied successfully with other marine molecules such as corozalic acid, an okadaic acid biosynthetic precursor, for quick and efficient structural elucidation37. Utilizing the NMR processing software MestReNova v.7.1.0-9185, both the 1D and the 2D data sets were overlaid. The 2D HSQC experiments were the most useful in identifying the major differences in the structure. Once a region of the molecule was identified that differed from the standard, additional NMR experiments were used to assign and confirm the new KmTx structures.
The structures of Abbotoxin and its 59-E-chloro-Abbotoxin were elucidated using similar techniques as those in Waters et al.,8 and the detailed data set is presented in the Supporting information S1-S18. These structures are the smallest congeners elucidated to date and differ significantly from KmTx2 in the C1-C18 region. The structures were five carbons fewer than KmTx2 all of which come from the polyol region. The HSQC overlay experiments showed that C23-C63 and C65-67 for KmTx2 are identical to C19-49 and C60-62 for the 59-E-chloro-Abbotoxin. The difference in the structures was the loss of C64, C13-14 and C16-17 (3 CH’s, 1 CH2 and 1 CH3 [68 amu]) from KmTx2. The key HMBC and COSY correlations and the deletion of carbon from KmTx2 for the final assembly of C1-18 of the chlorinated Abbotoxin are shown in the supporting information. Abbotoxin and its 59-E-chloro-Abbotoxin differ from each other only by the characteristic loss of a chlorine atom on the terminal diene. The relative configuration of these congeners was assigned by comparison to KmTx2 with careful analysis of NOE interactions for new stereogenic centers. For portions of the molecule where KmTx2 NMR overlay was too different for direct comparison, computational chemical shift calculations2 were carried out to confirm the relative configuration of new stereogenic centers and link them back to the known absolute configuration of C21 established in KmTx2 by degradation chemistry.3 Based on this method, the absolute configuration of Abbotoxin is 2S, 6R, 14S with C10 remaining ambiguous due to insufficient data to conclusively assign this sterocenter.
HSQC Sterol Binding Experiments. Standards were prepared by adding 2.0 mg (7.08 mM) KmTx8 in 200µL MeOD with 10µL CDCl2 to a 3 mm NMR tube. Helium was used to remove dissolved O2 and achieve cleaner NMR signals. HSQC and ROESY experiments were completed using a Varian 600 MHz NMR at 25oC. The HSQC data for Region II of the molecule (oxygenated carbons) is shown in blue above. In a separate NMR tube, 2.0 mg (7.08 mM) 8 in 200µL MeOD and 0.2 mg (2.46 mM) cholesterol in 10µL CDCl2 were combined and data acquired identically to the standard. The HSQC is shown in red above. The two data sets were then overlaid utilizing MestReNova 7.0.3-8830. This process was repeated using 0.3 mg cholesterol dissolved in CDCl2.