Bats of the family Phyllostomidae showed a great richness of species; in total, 13 species were captured. Considering the most-used capture method in this study (mist nets installed at 1.5 meters above ground level), the high richness of phyllostomids was predictable, given the greater diversity of these bats in the tropics, as well as their foraging characteristics [38]. However, it is crucial to point out that using only this method may underestimate other families, such as Vespertilionidae and Molossidae [65], and can thus be considered a selective method. Therefore, the importance of adopting a combination of methods, such as mist nets (canopy), active searches and harp traps is recommended to ensure a comprehensive and representative sampling of bats [66, 67–68].
The relevance of the family Phyllostomidae is undeniable, as it plays crucial roles at all trophic levels, performing essential functions such as pollination, seed dispersal, and regulation of arthropod and small vertebrate populations. As pointed out by Medellin et al. [69], the diversity of feeding habits of this family of bats plays a fundamental role in the preservation and balance of forest ecosystems.
Members of the family Molossidae, whose eating habits are exclusively insectivorous, were identified in 13% of the sampling effort carried out in urban areas, establishing direct contact with human beings when they lodge in the roof spaces of homes. Despite harboring a diverse microbiota, made up of pathogenic and non-pathogenic agents, the intensification of contact between these bats and humans can result in highly pathogenic zoonotic incidents, which can be triggered by the phenomenon known as spillover. Factors such as the reduction in food supply and the loss of natural habitat for these bats contribute to this spillover since these factors lead them to move even closer to environments inhabited by humans [35–70].
Two tick species, O. hasei and O. marinkellei, were found infesting bats in the present study. Previous reports of O. hasei in Brazil were in the eastern Brazilian Amazon, in the states of Pará [71] and Amapá [63], and in the Pantanal and Caatinga biomes [72–73]. Therefore, our reports are the first for the western Brazilian Amazon. On the other hand, the present report of O. marinkellei just expand its geographic range in the state of Rondônia, since previous records of this tick species were restricted to the northern part of the state [74].
Despite a richness of 17 bat species, ticks were found on only two species, N. leporinus and P. rubiginosus. A previous study reported N. leporinus as a host for O. hasei in the Pantanal biome [73]; thus, this is the first report for the Brazilian Amazon. Interestingly, the relatively high prevalence (37.7%) of O. hasei on N. leporinus in the present study is similar to a previous study that reported this tick species infesting 40% of the bat Artibeus planirostris in the Caatinga [72]. In the Pantanal biome, where O. hasei was the only tick species associated with bats, Muñoz-Leal et al. [73] proposed that A. planirostris was the most important host for O. hasei, despite several other infested bat species, including N. leporinus, being also found. Our results suggest that N. leporinus is the most important host species for the study area in the municipality of Monte Negro, western Brazilian Amazon. Finally, we provide the first report of O. hasei on P. rubiginosus, which has been reported as the main host for O. marinkellei [41].
We detected the presence of “Candidatus R. wissemanii” in only one specimen of O. hasei, giving an infection rate of 1.2% (1/84). Previous studies reported this rickettsial agent in one out of three pools of O. hasei larvae from the state of Amapá, eastern Brazilian Amazon [63], in 28.9% (31/107) of O. hasei larvae from French Guiana [77], and in three O. hasei larvae from Argentina [78]. Our report is the first for the western Amazon. Although “Candidatus R. wissemanii” is a member of the spotted fever group of Rickettsia species, its pathogenic role in humans or animals remains to be evaluated [63–76]. Finally, Tahir et al. [75] also tested the O. hasei ticks for Borrelia and Coxiella DNA; similarly to the present study, no ticks were infected by these agents.
Some Rickettsia species are the etiological agents of spotted fever in humans, who acquire the infection through the bite of infected ticks; in Brazil, this is chiefly through ticks of the genus Amblyomma. The disease manifests itself a few days after the bite and evolves with a rash at the site of the bite, severe headache, chills, high fever and skin lesions (punctiform). If not treated early, the disease can progress to serious complications such as neurological disorders, kidney failure, respiratory problems and death [75]. Despite “Candidatus R. wissemanii” never having been associated with disease in humans or animals, it is novel tick-borne agent that was only recently described [63, 75, 76]. Therefore, this result should be better investigated in further studies.
In this study, the genomic investigations of the ectoparasites did not identify the genus Orientia; however, the disease caused by organisms of this genus, once limited to the Middle East, was recently identified in South America in mites and in serological surveys in humans, with a seroprevalence of 0.4%. Silva de La Fuente et al. [78] and Abarca et al. [79] describe the occurrence of Orientia sp. in southern Chile.
Though we did not detect Borrelia spp. in the present study, this bacterial genus has been recently reported in argasid ticks of the genus Ornithodoros in Brazil, including bat-associated ticks [80]. In the state of Ceará, Muñoz-Leal et al. [80] reported the presence of a Borrelia species of the relapsing fever group in O. hasei. Further studies are warranted to verify the circulation of relapsing fever in the state of Rondônia, where the argasid fauna is the richest in Brazil [80–81].
Coxiella burnetii is the etiologic agent of Q fever, a disease with acute and chronic presentations that is transmitted mainly by aerosols containing the bacteria. Cattle, sheep and goats are the main reservoirs. Less frequently, transmission can occur by the tick that becomes infected in a reservoir. Its clinical manifestations are similar to those of the other diseases mentioned above but the disease has low lethality [82]. This study did not detect this bacterium in the ectoparasite sample. Q fever is a disease with generic clinical manifestations, there are a few cases of the disease identified in Brazil [83]. Oliveira et al. [84] detected a high prevalence of C. burnetti DNA in the placental tissue of goats in the northeast of Brazil, which demonstrates the circulation of the pathogen and its threat to humans. Pacheco et al. [85] recently described two new strains of Coxiella in Amblyomma spp. ticks from Argentina, further confirming the circulation of the pathogen in South America. Mioni et al. [86], using seropositive samples of cattle blood, with antibodies against Coxiella, identified a significant prevalence of 12.2% using qPCR for C. burnetii DNA. This indicates the need for more intensive epidemiological surveillance by the governments of Brazil and Argentina. Serological studies should also be carried out in humans to estimate the burden of the disease.
The role of ticks in the transmission of Bartonella spp. is controversial, even though they has been found infected in nature (which does not necessarily class it as a vector). Other arthropods (lice and sandflies) are confirmed vectors. A cat’s scratch and/or bite can transmit the bacteria, as can the saliva, urine, and feces of bats. Depending on the species of Bartonella, it can have acute and chronic systemic clinical manifestations, mainly affecting the skin and heart, though it has low lethality [90].
The occurrence of Bartonella sp. has been found in five families of chiropterans [88] and in bat flies of the families Nycteribiidae and Streblidae. Regarding bats from the family Phyllostomidae, Ferreira [91] provided evidence on Bartonella, which is also prevalent in populations of bats and their ectoparasites in Brazil, helping to clarify the distribution of Bartonella sp. related to bat ectoparasites in South America [89]. In this study, infection by Bartonella is recorded for the first time in bat flies (Trichobius joblingi and Strebla mirabilis) in the Brazilian Amazon. Previously in the Amazon, Morse et al. [86] reported Bartonella in parasite flies in French Guyana. In Brazil, the occurrence of infections by Bartonella in parasitic bat flies was reported by Braga et al. [89] in the state of Maranhão, and by Amaral [87] in the state of Rio de Janeiro.
Hayman [33] and Subudhi et al. [34] highlight that, in recent years, interest in bat research has increased due to the occurrence of the spillover phenomenon, in other words, the transmission of a pathogen from its natural reservoir or host species to a new host species, thus enhancing the possibility of spreading diseases to humans and other mammals. In Brazil, the number of complaints of human infestations by bat ticks inside urban and rural households has increased substantially in recent years [93–96]. Indeed, health authorities should be aware of the possibility of emerging vector-borne diseases linked to bats in Brazil.