Study overview
A combined longitudinal and cross-sectional design (summarized in the flow chart, Figure 1.) was used to investigate the effects of photothrombotic ring model of stroke in juvenile rats. In the longitudinal study, the evolution of lesion and penumbra volume, diffusion, and BBB permeability was evaluated on day 0 (d0), day 2 (d2) and day 7 (d7) following stroke induction using in-vivo MRI. A cross-sectional histology study complemented this to corroborate the MRI results.
Figure 1. Experimental Workflow
Figure 1 -For cross-sectional evaluation, H&E staining was conducted on 3 rats (n=1 per time point), EB staining was conducted on 9 rats (n=3 per time point), and TTC staining was conducted on 9 rats (n=3 per time point). *The rats evaluated for TTC on day 7 were used from the day 7 longitudinal MRI subgroup. For longitudinal evaluation of the stroke, T2W and DWI were conducted on n=14 rats on Days 0, 2, and 7. DCE MRI was conducted longitudinally on a subset of seven rats on Days 0, 2, and 7, however, three of the contrast injections failed on day 7 (day 0 n=7, day 2 n=7, day 7 n=4).
Subjects
Thirty-five Sprague Dawley male rats (mean age five weeks, weight range 130-189 g) were used for the combined longitudinal and cross-sectional studies. Before surgery, rats are paired and housed in large cages under a 12-hour light/dark cycle with temperature control (22 °C) and fed ad libitum. All procedures were approved by The Animal Care Committee at the Hospital for Sick Children under the Canadian Council of Animal Care guidelines. Reporting of this work complies with Animal Research: Reporting in Vivo Experiments (ARRIVE) guidelines [21].
Photothrombotic Stroke Induction
Prior to induction, anesthesia was induced using 5% isoflurane mixed with a flow rate of 1–2 L/minute of oxygen, maintained at 1.5–2.5%, and followed by intraperitoneal injection of slow-release Buprenorphine (0.03 mg/kg, stock concentration of 0.3 mg/mL diluted into 0.01 mg/mL with 0.9% saline) as an analgesic. The hair on the skull was shaved, and the skin was prepared by disinfecting with 10% betadine (povidone-iodine) followed by 70% isopropyl.
The surgical procedure for photothrombotic stroke was induced in all 35 rats using a ring-shaped lesion. The lesion was created using a hollowed dark polyvinyl chloride mask of 5 mm in diameter with a thickness of 0.5 mm and a second circular mask with a radius of 3mm central to three identifiers (midline, lambda, and bregma) to create an annular ring size of 2mm. The masks were positioned on the skull to restrict the illumination to only the ring-shaped cut-out[18] (Figure 2).
Figure 2
Figure 2 (a) Surgical setup prior to positioning the fibre optic source in the designated area. (b) The 3-mm-diameter circular mask is placed on the skull and is surrounded by another mask with a 5-mm-diameter hollowed circle to create a ring with an annular size of 2mm. The fibre optic will be positioned perpendicularly to the skull surface, with the 3-mm-diameter mask at its centre.
A fibre optic cold light source (SCHOTT MLS, Germany) was then positioned perpendicularly on the entire surface of the exposed area. Rose Bengal dye (Sigma- Aldrich, USA; 2 ml/kg, concentration: 10 mg/ml saline) (34,35) was injected through the tail vein and circulated for 5 minutes, followed by illumination at 100% light intensity for 20 minutes. Following the illumination period, the masks were removed, and the surgical site was sutured. The rats were left to recover under O2 with body temperature monitoring until conscious. They then rested for 2 hours post-op (i.e. the end of light illumination) before use for longitudinal or cross-sectional studies. Three of the 35 rats perished due to complications, leaving 32 for the remaining research.
Longitudinal MRI Assessment
A longitudinal evaluation was conducted with a subset of rats (n=14), with MRI performed on days 0, 2, and 7 post-ischemic stroke induction to evaluate the hyperacute, sub-acute and chronic stages of stroke (see timeline in Figure 3).
Figure 3
Figure 3 - Timeline of longitudinal study following photothrombosis. For animals allocated to Day 0 time point, MRI was conducted 2 hrs post-op ('post-op' determined as the end of light illumination). For animals assigned to Day 2 time point, MRI was conducted 46 hrs post-op, and lastly, for animals allocated to Day 7 time point, MRI was conducted 166 hrs past-op, followed by sacrifice and histology 168 hrs post-op.
Before and during MRI, rats were temporarily anesthetized with isoflurane (2% with oxygen). Breathing was visually monitored between scans to ensure correct isoflurane levels. Body temperature was maintained by positioning a heat-conducting blanket around the rat’s body. Imaging was conducted using a 3.0T MRI system (Philips Achieva 3.0T TX) equipped with an 8-channel wrist coil with rats in a prone position. The MRI protocol consisted of T2-weighted (T2W) and diffusion-weighted imaging (DWI) to characterize the lesion and penumbra evolution and dynamic contrast-enhanced (DCE) imaging sequences to measure BBB permeability. The T2W protocol consisted of a standard 2D turbo spin echo acquisition (TR/TE = 3,000/98 ms, FOV = 100 x 85 mm2, Matrix=168x142, pixel size= 0.28x0.28 mm, 5.6 pixels per mm, FA=90˚, number of slices=8, slice thickness=1 mm, number of slices=8). DWI images were obtained with a 2D turbo spin echo acquisition with an additional set of diffusion gradients (TR/TE=801/86 ms, FOV=100x85 mm2, Matrix=168x142, pixel size= 0.18x0.18 mm, 3.52 pixels per mm, FA=90˚, slice thickness=2 mm, number of slices=6, b=0, 1000). The DCE MRI sequence consisted of a T1-weighted dynamic 3D gradient echo acquisition was used (TR/TE=6.3/2.2 ms, temporal resolution=6.1 s, FOC=100x85 mm2, Matrix=168x142, number of slices=10, number of dynamics per slice=40, slice thickness=1 mm, volumes=36, time=4 min 20 sec). Gadolinium-DTPA was injected through the tail vein at a rate of 60 μL over 10-15 seconds beginning approximately 25 seconds after the start of the DCE acquisition.
Fourteen rats underwent MRI, including T2W and ADC, and a subset (n=7) also had DCE imaging for all time points (see flowchart in Figure 1).
Sacrifice: Following imaging on day 7, all rats were sacrificed using a guillotine where the head was detached from the rest of the body at the neck area. Three out of 14 sacrificed rats were also used for histology (TTC staining) to minimize the number of rats for the cross-sectional study. These are referred to as (+3)* in the cross-sectional study section (see Figure 1 and * below in Cross-Sectional Study Assessment).
MRI Analysis: MRI data were transferred to an independent workstation and analyzed offline. The restriction of water diffusion in the lesion was measured with DWI, BBB permeability in and around the lesion with DCE MRI, and lesion volume was quantified from T2W imaging (as outlined in the next section).
DWI: Apparent diffusion coefficient (ADC) maps were calculated using a least-square fit of the acquired signal [22] at the two b-values (b=0, 1000) for each animal. The ADC maps were created using MATLAB v.7.11 (Mathworks, Natick, MA, USA). ADC values were calculated based on three regions of interest (ROI): the lesion (LN), the penumbra (PN) and the homologous area in the contra-lesional hemisphere (ie. healthy non-lesioned tissue) (CH) (units: x10-6 mm2/s). The ADC maps were compared to their corresponding high-resolution T2W slices to localize these regions. ADC values were calculated in ROIs drawn on the LN and PN.
DCE MRI: Permeability maps were generated on a pixel-by-pixel basis (expressed as permeability surface area product (KPS) in units: mL/100 g/min) in MATLAB v.7.11 (Mathworks, Natick, MA, USA) using the Patlak model [23]. The sagittal sinus generated the input function [24]. After creating the KPS map, permeability values within the lesion's high-intensity areas were outlined, calculated, and averaged on a single coronal slice. The location of the lesion was determined by comparing the DCE scans with their corresponding high-resolution T2W image (20). The permeability value of a homologous area in the CH was also calculated to control for variability between scans. The ratio between the KPS values (LN and CH) was then determined. Two independent investigators (A.K. and F.H.) conducted inter-rater reliability for DCE MRI analysis.
T2W Imaging: To calculate stroke lesion volumes, 3D Slicer image analysis platform (3D slicer, USA) using a GrowCut algorithm [25,26] was used. Two independent investigators calculated the total lesion volume, including the penumbra and lesion, across all slices. The ratio between the total lesion volume and brain volume was calculated for each rat to measure total brain volume. Each rat's average relative lesion volume was then calculated per time point.
Cross-Sectional Assessment
Cross-sectional evaluation was conducted in a subset of rats (n=18 + 3*). In this cohort, triphenyl tetrazolium chloride (TTC) staining was performed on 9 (6 + 3*) rats on days 0, 2 and 7 (n=3 for each time point) post-ischemic stroke induction to verify the presence and size of the lesion and penumbra. H&E staining was performed on three rats on days 0, 2 and 7 (n=1 for each time point) to examine further stroke characteristics, including the pathophysiological differences between the lesion and penumbra. Histological staining was conducted using EB on nine rats on days 0, 2 and 7 (n=3 for each time point) following stroke to investigate BBB permeability.
Following photothrombotic surgery, rats undergoing histology procedures (TTC, H&E and EB) were sacrificed via decapitation using a guillotine. The brains were extracted within 10 minutes by cutting through the skull posterior to anteriorly. The skull was then carefully removed, and the brain extracted, washed in iced phosphate buffer saline (PBS), placed in a brain mould and a sheet of weighing paper and put in a -20℃ freezer for 20 minutes to maintain structure. This procedure was also performed on the +3* (see Figure 1) in the TTC Staining group in the longitudinal study after sacrifice.
TTC Assay: Three rats at each time point, days 0, 2, and 7 after initiation of photothrombotic stroke, were sacrificed. The three rats in the d7 group were carried over from the d7 longitudinal study for 7 TTC analysis. The brains were extracted, and following 20 minutes of freezing time, the cerebrum was cut into 1 mm thick coronal slices and placed in 2 % TTC solution (0.3 g of TTC powder dissolved in 15 mL of 0.9% saline) for 15 min in a 37 °C incubator for the macroscopic determination of tissue viability. All slices were photographed for delineation of the infarct. TTC slides were inspected visually, where negative regions represent the necrotic and non-viable tissue (i.e. white tissue) and TTC-positive, viable tissue (pink-coloured tissue or gradient).
Haematoxylin and Eosin (H&E) Staining: After initiating stroke, three rats at each time point, days 0, 2, and 7, were sacrificed, and the brains were extracted. After 20 min of freezing, extracted brains were placed in a 1:10 diluted, buffered 10 % formalin solution (Fisher-brand, USA) and stored in a 4˚C freezer for 22 hours to dehydrate and harden the brain tissue. Following this, the slice representing the center of the infarct and penumbra was removed and processed with H&E staining.
Evan’s Blue (EB) Extravasation: Rats were fully anesthetized using 5% isoflurane with an oxygen flow rate of 1-2 L/minute. EB dye (Sigma, 10 mg/ml in saline, 2.5 ml/kg rat weight) was injected into the tail vein on days 0, 2, and 7 (n=3 at each time point) following photothrombotic lesion induction. Two hours after EB injection, the rats were anesthetized again and sacrificed, and the brains were then removed from skulls immediately after death. The brains were then sliced coronally into 1 mm sections and labelled as lesioned and contra-lesional hemispheres. The slices were then stored in -80 ˚C freezers and thawed for measurement.
To quantify EB, each slice was placed in a 3.5% formaldehyde solution, and the tissue was then pelleted with centrifugation. The concentration of EB absorbance was measured with a spectrophotometer at 620 nm against a set of EB standards. The values were then normalized against the weight of the tissue sample to generate a value of EB (µg)/brain tissue (mg). EB leakage was expressed as a ratio of the average lesion value (LN) to contralesional homologous tissue (CH).
Statistical Analysis
A one-way repeated measures Analysis of Variance (ANOVA) was used to evaluate the changes in T2W and a two-way repeated measures ANOVA was used to compare ADC changes over time. Paired t-tests were used for both DCE and EB to compare the dye extravasation levels between the lesion and contra-lesional homologous tissue. Differences in DCE and EB extravasation ratios at different time points were tested using one-way ANOVA. Post-hoc pairwise comparisons were conducted using the Tukey-Kramer test. Continuous variables were presented as average ± standard deviation (SD).
Inter-rater reliability was evaluated for the T2W and DCE measurements obtained from two independent raters (AK and FH), and intraclass correlation coefficients (ICC) were calculated. ICC values were classified as <0.41, “poor”; ≥0.41 and <0.59, “fair”; ≥0.59 and <0.74, “good,” and ≥0.74, “excellent” (43). A p-value of <0.05 was deemed statistically significant. Analyses were conducted using SAS University Edition (SAS Institute, Inc., Cary, NC).