Preparation of ethanol extract of Aurantiochytrium sp. (EEA)
Dried powders of Aurantiochytrium sp. cells were provided by Professor Makoto Watanabe (Algae Biomass and Energy System R&D Center, University of Tsukuba, Japan). The algae dried powders were extracted using 99.5% ethanol (g/10 mL), in the dark, and at room temperature for two weeks, with shaking of the mixture occurring at least once a day. At the end of the procedure, the liquid fraction was collected and filtered through a 0.22 μm filter. For both in vitro and in vivo experiments, the EEA liquid fraction was concentrated using a SpeedVac (Thermo Fisher Scientific, Japan) For in vitro experiment, the concentrated EEA was dissolved in serum-free Eagle’s minimum essential medium (OPTI-MEM; Gibco, Japan) with sonication and for in vivo experiment, the concentrated 150 mg EEA was dissolved in 10 mL milliQ water with sonication.
Preparation of n-Hexane layer of EEA using liquid-liquid distribution
To obtain the extract, Aurantiochytrium sp. 18W-13a strain was extracted as above with 99.5% EtOH for 2 weeks and the EtOH extract was filtered and evaporated in vacuo. The concentrated EEA (200 mg) was dissolved in 100 mL n-Hexane and 100 mL 90% MeOH was added to the extract. The extract was partitioned between the 90% MeOH layer and the n-Hexane layer due to the difference in their solubility. Partitioning the 90% MeOH layer and n-Hexane layer was repeated twice with 100 mL n-Hexane. Next the n-Hexane layer containing EEA (HEEA) was concentrated using vacuo, 100 mg of this concentrate was dissolved in 1 mL of 99.5% EtOH and used for in vitro experiments. For animal dosing for the in vivo assay, the HEEA was concentrated and the dried 150 mg HEEA was dissolved in 10 mL milliQ water with sonication.
Preparation of squalene
Squalene was purchased from Wako Co, Ltd. (Tokyo, Japan). For in vitro assays, squalene was dissolved in medium and sonicated before use in the experiment, because it was difficult to soluble to medium.
SH-SY5Y cell culture
The human neuroblastoma SH-SY5Y cell line was purchased from the American Type Culture Collection. SH-SY5Y cells were cultured in a 1:1 (v/v) mixture of Dulbecco’s modified Eagle Medium and Ham’s F-12 medium (Gibco, Japan) supplemented with 15% heat-inactivated fetal bovine serum (Bio West, U.S.A) and 1% penicillin (5000 μg/ml)–streptomycin (5000 IU/ml) (PS) (Lonza, Japan) at 37°C in a humidified atmosphere of 5% CO2 in air. SH-SY5Y cells were cultured in 100-mm petri dishes or 96-well plates. OPTI-MEM was used to culture the cells for the cell viability assay.
MTT assay
Cell viability and mitochondrial activity were determined using a 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assay to check for effects of EEA (20 μg/mL), HEEA (20 μg/mL), squalene (50 μM), and Amyloid-β (Aβ) (15 μM) on cytotoxicity. SH-SY5Y cells were seeded at 2×105 cells/mL in 96-well plates and incubated for 24 hr. After 24 hr incubation, SH-SY5Y cells were treated EEA, HEEA, squalene, or Aβ for 72 hr. To evaluate the neuroprotective effects of EEA, HEEA, and squalene against Aβ-induced cytotoxicity, SH-SY5Y cells were pre-treated with 20 μg/mL EEA, 20 μg/mL HEEA, and 50 μM squalene for 10 min before 15 μM Aβ treatment. After sample treatment, a solution of 5 mg/ml MTT dissolved in PBS was added (10 μl/well) and incubated for another 24 hr. The resulting MTT formazan was dissolved in 100 μl of 10% SDS (w/v) and the absorbance was measured using a microtiter plate reader (Dainippon Sumitomo Pharma Co., Ltd., Japan).
ATP assay
The effect of EEA on ATP production of SH-SY5Y cells was determined using a luciferase luminescence assay kit (ATP reagents for cell: TOYO Ink, Tokyo, Japan). SH-SY5Y cells were seeded at 2×105 cells/mL and incubated for 24 hr. After incubation, SH-SY5Y cells were treated with 20 μg/mL EEA. After 6, 12, and 24 hr incubation, the ATP assay reagent was added (100 μl/well) and incubated for 10 min at room temperature while avoiding light exposure. After the incubation, the solution was transferred into a white clear-bottom 96-well plate (BD Falcon) and the luminescence was detected using a microplate reader (Dainippon Sumitomo Pharma Co., Ltd., Japan).
Primary NPC Culture
NPCs were obtained from the SVZ of seven-day old postnatal mice following the procedure described by Torrglosa et al., 2007 [18]. Six CD1 mice were used for each independent culture. Neurosphere cultures were maintained in defined medium (DM) composed of Dulbecco´s modified Eagle´s medium/F12 medium 1:1 (v/v) with 1 mg/L gentamicin (GIBCO) and B27 supplement (Invitrogen, Carlsbad, CA). EGF (20 ng/mL, GIBCO) and bFGF (10 ng/mL, Peprotech, Frankfurt, Germany) were added to cultures to stimulate cell proliferation and culture expansion. All animal procedures were approved by the Animal Study Committee of Tsukuba University and according to the guidelines for the Care and Use of Animals approved by the Council of the Physiological Society of Japan.
To test the effect of EEA (20 µg/mL) and HEEA (20 µg/mL) on primary neurospheres, single cells from mechanically disaggregated neurospheres were seeded in anti-adherent 96 well plates (Corning, NY, USA) at a density of 20,000 cells/mL. EEA (20 µg/mL) or HEEA (20 µg/mL), EGF (20 ng/mL) and bFGF (10 ng/ml) were added at the time of seeding. 72 hr after seeding, the number of newly formed neurospheres was counted with phase microscopy. To measure neurosphere size, images of at least 50 neurospheres per well were taken. Size was measured using ImageJ softweare. Each treatment was performed in triplicate and repeated at least three independent times.
Immunocytochemistry
Cells in medium without growth factors were added onto poly-L-ornithine coated 8-well glass slide chambers (Lab-Tek) with EEA. After 72 hr, cells were fixed with 4% (w/v) paraformaldehyde. After 3 washes, cells were incubated with blocking solution composed of phosphate-buffer saline (PBS) containing 2.5% (w/v) bovine serum albumin (BSA) for 1 hr to avoid nonspecific antibody binding. Primary antibody incubations were carried out overnight at 4º C in blocking solution. Then, cells were washed with PBS and incubated with the appropriate secondary antibody for 1 h.
The primary antibodies used were mouse anti-β-III-tubulin (Promega, 1:1000) and rabbit anti-GFAP (DAKO, 1:3000). The secondary antibodies used were donkey anti-rabbit Alexa Fluor 488 and donkey anti-mouse 594 (Invitrogen, 1:1000). Nuclei were counterstained with DAPI using drops of ProLong Gold Antifade Mountant (Thermo SCIENTIFIC, Japan). Fluorescence was detected with a Leica DMI 4000B epifluorescent microscope (Leica, Germany). Quantification was performed in 12 predetermined visual fields/well and 3 wells/condition. Experiments were repeated a minimum of 3 times and results were expressed as the mean ± SEM.
Animals
Adult male SAMP8 (four-month-old) and SAMR1 (four-month-old) (SLC Japan) were used for in vivo experiments. After acclimatization to laboratory conditions (7 days), SAMP8 mice were divided in three groups, SAMP8 control group, orally administered only with water (n = 6), EEA-treated group (n = 7), and HEEA-treated group (n = 7). SAMR1 mice (n = 10) were used as a normal aging control. Animals were housed under controlled conditions of temperature (21-23ºC) and light:dark (12:12 hrs) with free access to food and water. All animal procedures were approved by the Animal Study Committee of Tsukuba University (No.08-007) and according to the guidelines for the Care and Use of Animals approved by the Council of the Physiological Society of Japan.
Oral administration (gavage) of EEA (50 mg/kg) and HEEA (50 mg/kg), dissolved in drinking water, was performed 1 x per day for 30 days. An equal volume of water was administered to the water-administration group. In addition, BrdU (1 mg/ml) was diluted in the drinking water and provided to the SAMR1 control mice, the SAMP8 control group, and the EEA-treated group during 9 consecutive days starting with the 14th day of oral administration.
Morris water maze (MWM)
Spatial learning and memory were analyzed using the MWM as previously described [14] with minor modifications. A circular pool (120 cm in diameter and 45 cm in height) was filled to a depth of 30 cm with water (23 ± 2°C) and was divided into four quadrants. A platform (10 cm in diameter) was placed in the northeast quadrant and was submerged 1 cm below the water surface so that it was invisible at water level. Each mouse had daily sessions of one trial for 7 consecutive days. When the mice succeeded, they were allowed to stay for 15 sec on the platform. When mice failed for more than 60 sec, the experimenter assisted them to find the platform. A probe trial was performed 24 h after the last training session of MWM. The platform was removed from the pool in this trial and mice were allowed to swim freely for 60 sec. The number of crossings over the previous position of the platform and the time spent in the target quadrant in which the platform was hidden during the acquisition trials were recorded as measures for spatial memory.
Tissue processing and immunohistochemistry
Mice were sacrificed by cervical dislocation after the Morris Water Maze (MWM) test, brains were removed and fixed with 4% PFA for 24 hr at 4ºC. After, brains were cryoprotected in 30% sucrose (w/v) in PBS for 48 hr at 4ºC. Serial 30 µm coronal brain sections were obtained using a microtome on dry ice. Sections were stored at -20ºC in cryoprotectant solution (ethylene glycol, glycerol, 0.1 M phosphate buffer, pH 7.4, 1:1:1:2 by volume). Pre-treatment of tissue was required for BrdU detection. BrdU antigen retrieval was achieved with 1 M HCl at 38.5 °C for 1 hr. Sections were blocked with a solution composed of PBS, 0.1% Triton X-100 and 1% bovine serum albumin (Sigma) for 1 hr, after washing abundantly with PBS. Primary antibodies were incubated overnight at 4ºC. Sections were washed and incubated with fluorochrome-conjugated specific secondary antibodies overnight at 4ºC. Primary antibodies used were: sheep polyclonal anti-BrdU (1:500, Abcam), rat monoclonal anti-GFAP (1:400, Life Technologies), mouse monoclonal anti-NeuN (1:400, Millipore), goat polyclonal anti-DCX (1:100, Santa Cruz). The secondary antibodies were conjugated to Alexa-488, -568 or -647 (Invitrogen Paisley, Renfrewshire, UK; 1:500). Sections were mounted with Prolong Antifade Kit (Molecular Probes, Eugene, USA). A Leica DMIRB microscope with a Hamamatsu C4742-95 digital camera or a Leica DMR microscope with a Leica DFC-500 digital camera was used to obtain epifluorescence images. Confocal images were obtained with a Zeiss LSM 710 laser scanning confocal microscope using the Z-stack and tile functions as appropriate.
Quantification and statistical analysis
All analysis was performed blind to the condition on coded slides as previously described [19]. Microsoft Excel was used for collating all data and the statistical analysis was performed using SPSS Statistics 22. When more than one treatment group was compared to controls statistical analysis were preformed using one-way ANOVA followed by post-hoc Bonferroni´s test. A Student´s t test was used when only one group was compared with the controls. Differences was considered significant a denoted with asterisks at values of * P < 0.05 or ** P < 0.01.