Cell culture
Human normal osteoblastic cell line hFOB1.19 and OS cell lines including MG63, HOS, 143B and U2OS were acquired commercially from Chinese Academy of Sciences (Shanghai, China). All cell lines were allowed to grow in Dulbecco’s modified Eagle medium (DMEM; Invitrogen, Carlsbad, CA) supplemented with 10% fetal bovine serum (FBS; HyClone, Logan, UT) at 37℃ in 5% CO2.
Cell transfection plasmids
143B and U2OS cells were seeded into 6-well plates. When cell density was reached 80-90%, cells were transfected with circ-FOXM1-specific short hairpin RNA (sh-circ-FOXM1#1/2/3) and negative control (sh-NC) in line with the user guide of Lipofectamine™3000 (Invitrogen). Overexpressing vector pcDNA3.1/FOXM1 and empty vector pcDNA3.1 serving as the control were purchased from (GenePharma, Shanghai, China). To overexpress or knockdown miR-320a and miR-320b, miR-320a and miR-320b mimics or inhibitor were designed by RiboBio (Guangzhou, China), along with their respective controls. After 48 h of transfection, cells were harvested for subsequent study.
Quantitative real-time polymerase chain reaction (qRT-PCR)
Total RNA was extracted from OS tissues and cell lines using TRIzol reagent (Life Technologies Corporation). After measuring RNA concentration, 100 μg of RNA was used for reverse transcription. qRT-PCR analysis was carried out using SYBR Premix Ex Taq™ II (Takara, Japan) and the ABI 7500 Fast Real-Time PCR System (Applied Biosystems). The Ct value of samples was calculated by the 2-ΔΔCt method. U6 small nuclear RNA was seen as the miRNA internal control and GAPDH was seen as the internal control for other genes. All reactions were performed in triplicate.
Cell proliferative assays
Cell counting kit-8 (CCK-8) assays were used to analyze OS cell proliferation. 143B and U2OS cells were put into 96-well plates and cultured with 10 μl/well CCK-8 (Beyotime, Jiangsu, China) solution for 48 h. The cellular absorbance was detected by microplate reader (Molecular Devices) at 450 nm. For EdU incorporation assay, cells were transfected and incubated with 100 μL of 50 μM EdU medium diluent (Ribobio, Guangzhou China) in culture plates for 3 h. After fixation, cells were treated with 100 μL of the 0.5% Troxin X-100 and 100 μL of 1 × Apollo® 488 fluorescent staining reaction liquid for 30 min at 37℃. Cell nuclei were dyed with DAPI. All proliferative assays were repeated for at least three times.
Cell apoptosis assay
Apoptotic cells were detected using the TUNEL assay (In Situ Cell Death Detection Kit, Roche). The transfected cell lines were reaped and rinsed in PBS for 5 min, then subjected to 0.1% TritonX-100 in 1% sodium citrate on ice for 2 min. Following labeling with the fluorescein-TUNEL reagent at 37℃ for 1 h, DAPI was used to stain cell nucleus. The final images of three different experiments were visualized under an Olympus inverted microscope (Olympus, Japan).
Cell migration assay
After transfection, cells were trypsinized and adjusted to 2 × 105 cells/ml, followed by incubation in the upper chamber of separate polycarbonate membranes (8 μm pores) of a transwell (Costar, Lowell, MA). The lower chamber was supplied with 500 μl of culture medium with 10% FBS. A cotton swab scraped off the non-migrating cells in the upper chamber. The cells which filtered to the other side of the membrane were dyed with 2% crystal violet and counted under inverted microscope at × 200 magnification. Experiment was performed in triplicate.
Western blot assay
Cell lines were lysed in radio immunoprecipitation assay (RIPA) protein extraction reagent (Beyotime). Protein concentration was detected by BCA Protein Assay kit (Thermo Fisher Scientific, Rockford, IL). Samples were separated on sodium dodecyl sulphate-polyacrylamide gel electrophoresis (SDS-PAGE), transferred onto nitrocellulose membranes, and blocked in TBST with 5% nonfat milk for 2 h. Protein was incubated with the primary antibodies (Abcam, Cambridge, USA) overnight at 4℃ and washed thrice in PBS, followed by incubation with secondary antibodies. An antibody against GAPDH served as an endogenous reference. The signals were detected using the ECL Plus Detection Kit (Pierce, Rockford, IL). Each procedure was performed for more than two times.
Immunofluorescence staining assay
After transfection, cells on coverslips were subjected to fixation with 4% paraformaldehyde, and then blocked with 5% BSA. After that, we cultivated cells with primary antibodies against β-catenin at 4°C for one night, following fluorescence-conjugated secondary antibodies at room temperature. DAPI was utilized to stain cell nuclear. Finally, we utilized the Olympus microscope to analysis. The experiment was repeated at least three times.
Luciferase reporter assay
FOXM1 promoter was amplified by PCR and cloned into pGL3-Basic vector (Promega Corporation, Madison, WI, USA). U2OS and 143B cells were seeded on 96-well plates (8000/well) and co-transfected with luciferase reporter plasmids containing FOXM1 promoter and sh-circ-FOXM1 or sh-NC. 48 h later, luciferase activity was measured using the Dual-Luciferase Reporter Assay System (Promega, USA) in accordance with the user guide. For analyzing the interaction between miR-320a and miR-320b and circ-FOXM1 or FOXM1, U2OS and 143B cells were co-transfected with psiCHECK-circ-FOXM1-WT/MUT or psiCHECK-FOXM1-WT/MUT, and miR-320a and miR-320b mimics or miR-NC. Experimental data were obtained from three independent replicates.
RNA immunoprecipitation (RIP) assay
RIP assay was conducted using Magna RIP RNA-Binding Protein Immunoprecipitation Kit (Millipore, Billerica, MA, USA) following the supplier’s protocol. U2OS and 143B cells were rinsed in PBS and subjected to RIP buffer at 4℃ for 30 min, and incubated with protein A/G sepharose beads conjugated to antibodies against Ago2 (Millipore, Massachusetts, USA) or normal mouse immunoglobulin G (IgG; Millipore, California, USA). At length, immunoprecipitated RNA from cell lysates of three different experiments was extracted for qRT-PCR analysis.
Statistical analysis
All experimental results were expressed as the mean ± SD, and each experiment was repeated in triplicate. Statistical analyses and graphical depictions were conducted using GraphPad Prism 5.0 (GraphPad, San Diego, CA, USA). Student’s t test or one-way analysis of variance was used to evaluate the differences between results. Statistical significance was set as *P < 0.05, **P < 0.01.